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Publication search results
found 52 matches
- 2024
- Parveen Abdulhaniff, Penislusshiyan Sakayanathan, Chitra Loganathan, Ancy Iruthayaraj, Ramesh Thiyagarajan, Palvannan Thayumanavan:
Mammalian maltase-glucoamylase and sucrase-isomaltase inhibitory effects of Artocarpus heterophyllus: An in vitro and in silico approach. Comput. Biol. Chem. 110: 108052 (2024) - Suvankar Banerjee, Sandeep Jana, Tarun Jha, Balaram Ghosh, Nilanjan Adhikari:
An assessment of crucial structural contributors of HDAC6 inhibitors through fragment-based non-linear pattern recognition and molecular dynamics simulation approaches. Comput. Biol. Chem. 110: 108051 (2024) - Othman A. Baothman, Ehab M. M. Ali, Salman Bakr Hosawi, Emadeldin Hassan E. Konozy, Isam M. Abu Zeid, Abrar Ahmad, Hisham N. Altayb:
Multi-targeted therapeutic potential of stigmasterol from the Euphorbia ammak plant in treating lung and breast cancer. Comput. Biol. Chem. 110: 108037 (2024) - Bikash Baruah, Manash Pratim Dutta, Subhasish Banerjee, Dhruba K. Bhattacharyya:
EnsemBic: An effective ensemble of biclustering to identify potential biomarkers of esophageal squamous cell carcinoma. Comput. Biol. Chem. 110: 108090 (2024) - Shlok Bodke, Nachiket Joshi, Rajasekhar Reddy Alavala, Divya Suares:
In silico exploration of CB2 receptor agonist in the management of neuroinflammatory conditions by pharmacophore modeling. Comput. Biol. Chem. 110: 108049 (2024) - Jenner Bonanata:
The role of the active site lysine residue on FAD reduction by NADPH in glutathione reductase. Comput. Biol. Chem. 110: 108075 (2024) - Oliviero Carugo:
Accuracy of AlphaFold models: Comparison with short N O contacts in atomic resolution protein crystal structures. Comput. Biol. Chem. 110: 108069 (2024) - Yuqi Chen, Juan Liu, Peng Jiang, Yu Jin:
A novel multilevel iterative training strategy for the ResNet50 based mitotic cell classifier. Comput. Biol. Chem. 110: 108092 (2024) - Rupesh V. Chikhale, Heba Taha M. Abdelghani, Hemchandra Deka, Atul Darasing Pawar, Pritee Chunarkar Patil, Shovonlal Bhowmick:
Machine learning assisted methods for the identification of low toxicity inhibitors of Enoyl-Acyl Carrier Protein Reductase (InhA). Comput. Biol. Chem. 110: 108034 (2024) - Pranab Das, Dilwar Hussain Mazumder:
K1K2NN: A novel multi-label classification approach based on neighbors for predicting COVID-19 drug side effects. Comput. Biol. Chem. 110: 108066 (2024) - Abhichandan Das, Sanchaita Rajkhowa, Subrata Sinha, Magdi E. A. Zaki:
Unveiling potential repurposed drug candidates for Plasmodium falciparum through in silico evaluation: A synergy of structure-based approaches, structure prediction, and molecular dynamics simulations. Comput. Biol. Chem. 110: 108048 (2024) - Prerna Ganwir, Rajendra Bhadane, Ganesh U. Chaturbhuj:
In-silico screening and identification of glycomimetic as potential human sodium-glucose co-transporter 2 inhibitor. Comput. Biol. Chem. 110: 108074 (2024) - Lilu Guo, Hongwei Huo:
An efficient Burrows-Wheeler transform-based aligner for short read mapping. Comput. Biol. Chem. 110: 108050 (2024) - Xiaosheng Huangfu, Chengwei Zhang, Hualong Li, Sile Li, Yushuang Li:
SNSynergy: Similarity network-based machine learning framework for synergy prediction towards new cell lines and new anticancer drug combinations. Comput. Biol. Chem. 110: 108054 (2024) - Claudio Jardim, Alta de Waal, Inger Fabris-Rotelli, Najmeh Nakhaei Rad, Jocelyn Mazarura, Dean Sherry:
Feature engineered embeddings for classification of molecular data. Comput. Biol. Chem. 110: 108056 (2024) - Manikandan Jayaraman, Rajalakshmi Kumar, Santhiya Panchalingam, Jeyaraman Jeyakanthan:
Mechanistic insights into the conformational changes and alterations in residual communications due to the mutations in the pncA Gene of Mycobacterium tuberculosis: A computational perspective for effective therapeutic solutions. Comput. Biol. Chem. 110: 108065 (2024) - Chi Jiang, Yi Zhang, Yang Liu, Jing Peng:
Tensor improve equivariant graph neural network for molecular dynamics prediction. Comput. Biol. Chem. 110: 108053 (2024) - Dmitry A. Karasev, Boris Sobolev, Dmitrii Filimonov, Alexey Lagunin:
Prediction of viral protease inhibitors using proteochemometrics approach. Comput. Biol. Chem. 110: 108061 (2024) - Van-The Le, Muhammad-Shahid Malik, Yi-Hsuan Tseng, Yu-Cheng Lee, Cheng-I Huang, Yu-Yen Ou:
DeepPLM_mCNN: An approach for enhancing ion channel and ion transporter recognition by multi-window CNN based on features from pre-trained language models. Comput. Biol. Chem. 110: 108055 (2024) - Haihan Liu, Peiying Chen, Baichun Hu, Shizun Wang, Hanxun Wang, Jiasi Luan, Jian Wang, Bin Lin, Mao-Sheng Cheng:
FaissMolLib: An efficient and easy deployable tool for ligand-based virtual screening. Comput. Biol. Chem. 110: 108057 (2024) - Yang Liu, Yi Zhang, Zihao Chen, Jing Peng:
POLAT: Protein function prediction based on soft mask graph network and residue-Label ATtention. Comput. Biol. Chem. 110: 108064 (2024) - Pengli Lu, Jicheng Jiang:
AE-RW: Predicting miRNA-disease associations by using autoencoder and random walk on miRNA-gene-disease heterogeneous network. Comput. Biol. Chem. 110: 108085 (2024) - Yuxun Luo, Shasha Li, Li Peng, Pingjian Ding, Wei Liang:
Predicting associations between drugs and G protein-coupled receptors using a multi-graph convolutional network. Comput. Biol. Chem. 110: 108060 (2024) - Ishfaq Hassan Mir, Kankipati Teja Shyam, Susmida Seni Balakrishnan, Muthuvel Suresh Kumar, Thiyagarajan Ramesh, Chinnasamy Thirunavukkarasu:
Elucidation of escitalopram oxalate and related antidepressants as putative inhibitors of PTP4A3/PRL-3 protein in hepatocellular carcinoma: A multi-computational investigation. Comput. Biol. Chem. 110: 108039 (2024) - Sarbani Mishra, Madhusmita Rout, Mahender Kumar Singh, Budheswar Dehury, Sanghamitra Pati:
Classical molecular dynamics simulation identifies catechingallate as a promising antiviral polyphenol against MPOX palmitoylated surface protein. Comput. Biol. Chem. 110: 108070 (2024) - Yasmin H. Momin, V. C. Yeligar, M. G. Saralaya, G. Dharmamoorthy, B. P. Mallikarjuna, S. T. Jadhav, Kuntal Das, Mansour Almuqbil, Fuzail Ahmad, Syed Imam Rabbani, Syed Mohammed Basheeruddin Asdaq:
Computational investigation of 2, 4-Di Tert Butyl Phenol as alpha amylase inhibitor isolated from Coccinia grandis (L.) Voigt using molecular docking, and ADMET parameters. Comput. Biol. Chem. 110: 108087 (2024) - Shakthi Devi Packiapalavesam, Venkatesan Saravanan, Anand A. Mahajan, Mikhlid H. Almutairi, Bader O. Almutairi, Jesu Arockiaraj, Muthu Kumaradoss Kathiravan, S. Karthick Raja Namasivayam:
Identification of novel CA IX inhibitor: Pharmacophore modeling, docking, DFT, and dynamic simulation. Comput. Biol. Chem. 110: 108073 (2024) - Sanjeevi Pandiyan, Li Wang:
In-silico design of novel potential HDAC inhibitors from indazole derivatives targeting breast cancer through QSAR, molecular docking and pharmacokinetics studies. Comput. Biol. Chem. 110: 108035 (2024) - Dimitris P. Papamichail, Madeline Febinger, Shm Almeda, Tomer Aberbach, Georgios Papamichail:
Synthesis cost-optimal targeted mutant protein libraries. Comput. Biol. Chem. 110: 108068 (2024) - Yang Qiu, Yuanpeng Liao, Jianqiang Zhang, Yuedian Ye, Zhongshu Zhang, Zheng Jiang, Jiaai Zhang, Jinghan Xin, Shidong Lv, Hongmei Peng:
Exploring the role of coagulation-related genes in renal cell carcinoma: Implications for tumor microenvironment and prognostic biomarkers. Comput. Biol. Chem. 110: 108082 (2024)
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