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Publication search results
found 117 matches
- 2022
- Ling Luo, Chih-Hsuan Wei, Po-Ting Lai, Qingyu Chen, Rezarta Islamaj, Zhiyong Lu:
Assigning species information to corresponding genes by a sequence labeling framework. Database J. Biol. Databases Curation 2022(2022) (2022) - Giulia Agostinetto, Davide Bozzi, Danilo Porro, Maurizio Casiraghi, Massimo Labra, Antonia Bruno:
SKIOME Project: a curated collection of skin microbiome datasets enriched with study-related metadata. Database J. Biol. Databases Curation 2022(2022) (2022) - Iman Almansour, Imane Boudellioua:
hCoronavirusesDB: an integrated bioinformatics resource for human coronaviruses. Database J. Biol. Databases Curation 2022(2022) (2022) - Tiago Melo Almeida, Rui Antunes, João Figueira Silva, João Rafael Almeida, Sérgio Matos:
Chemical identification and indexing in PubMed full-text articles using deep learning and heuristics. Database J. Biol. Databases Curation 2022(2022) (2022) - Bachir Balech, Anna Sandionigi, Marinella Marzano, Graziano Pesole, Monica Santamaria:
MetaCOXI: an integrated collection of metazoan mitochondrial cytochrome oxidase subunit-I DNA sequences. Database J. Biol. Databases Curation 2022(2022) (2022) - Teerna Bhattacharyya, Soumya Nayak, Smit Goswami, Vasundhara Gadiyaram, Oommen K. Mathew, Ramanathan Sowdhamini:
PASS2.7: a database containing structure-based sequence alignments and associated features of protein domain superfamilies from SCOPe. Database J. Biol. Databases Curation 2022(2022) (2022) - Nadia Brancati, Anna Maria Anniciello, Pushpak Pati, Daniel Riccio, Giosuè Scognamiglio, Guillaume Jaume, Giuseppe De Pietro, Maurizio Di Bonito, Antonio Foncubierta, Gerardo Botti, Maria Gabrani, Florinda Feroce, Maria Frucci:
BRACS: A Dataset for BReAst Carcinoma Subtyping in H&E Histology Images. Database J. Biol. Databases Curation 2022(2022) (2022) - Andre Brincat, Markus Hofmann:
Automated extraction of genes associated with antibiotic resistance from the biomedical literature. Database J. Biol. Databases Curation 2022(2022) (2022) - Guoshuai Cai, Xuanxuan Yu, Choonhan Youn, Jun Zhou, Feifei Xiao:
SCANNER: a web platform for annotation, visualization and sharing of single cell RNA-seq data. Database J. Biol. Databases Curation 2022(2022) (2022) - Gjorgjina Cenikj, Eva Valencic, Gordana Ispirova, Matevz Ogrinc, Riste Stojanov, Peter Korosec, Ermanno Cavalli, Barbara Korousic-Seljak, Tome Eftimov:
CafeteriaSA corpus: scientific abstracts annotated across different food semantic resources. Database J. Biol. Databases Curation 2022(2022) (2022) - Po Lam Chan, Susana Lauw, Ka Lee Ma, Nelson Kei, Ka Leong Ma, Yiu On Wong, Ho Yan Lam, Yee Yung Ting, Tsz Kwan Yau, Wenyan Nong, Dandan Huang, Yichun Xie, Peter Chi Keung Cheung, Hoi Shan Kwan:
ProBioQuest: a database and semantic analysis engine for literature, clinical trials and patents related to probiotics. Database J. Biol. Databases Curation 2022(2022) (2022) - Andrew Chatr-aryamontri, Lynette Hirschman, Karen E. Ross, Rose Oughtred, Martin Krallinger, Kara Dolinski, Mike Tyers, Tonia Korves, Cecilia N. Arighi:
Overview of the COVID-19 text mining tool interactive demonstration track in BioCreative VII. Database J. Biol. Databases Curation 2022(2022) (2022) - Qingyu Chen, Alexis Allot, Robert Leaman, Rezarta Islamaj, Jingcheng Du, Li Fang, Wang Kai, Shuo Xu, Yuefu Zhang, Parsa Bagherzadeh, Sabine Bergler, Aakash Bhatnagar, Nidhir Bhavsar, Yung-Chun Chang, Sheng-Jie Lin, Wentai Tang, Hongtong Zhang, Ilija Tavchioski, Senja Pollak, Shubo Tian, Jinfeng Zhang, Yulia Otmakhova, Antonio Jimeno-Yepes, Hang Dong, Honghan Wu, Richard Dufour, Yanis Labrak, Niladri Chatterjee, Kushagri Tandon, Fréjus A. A. Laleye, Loïc Rakotoson, Emmanuele Chersoni, Jinghang Gu, Annemarie Friedrich, Subhash Chandra Pujari, Mariia Chizhikova, Naveen Sivadasan, Saipradeep Vg, Zhiyong Lu:
Multi-label classification for biomedical literature: an overview of the BioCreative VII LitCovid Track for COVID-19 literature topic annotations. Database J. Biol. Databases Curation 2022(2022) (2022) - Jiaqi Chen, Zhengxin Chen, Rufei Chen, Dehua Feng, Tianyi Li, Huirui Han, Xiaoman Bi, Zhenzhen Wang, Kongning Li, Yongsheng Li, Xia Li, Limei Wang, Jin Li:
HCDT: an integrated highly confident drug-target resource. Database J. Biol. Databases Curation 2022(2022) (2022) - Ashley Clayton, Mialy M. DeFelice, Brynn Zalmanek, Jay Hodgson, Caroline Morin, Stockard Simon, Julie A. Bletz, James A. Eddy, Milen Nikolov, Jineta Banerjee, Kalyan C. Vinnakota, Marco Marasca, Kevin J. Boske, Bruce Hoff, Ljubomir Bradic, Yoori Kim, James R. Goss, Robert J. Allaway:
Centralizing neurofibromatosis experimental tool knowledge with the NF Research Tools Database. Database J. Biol. Databases Curation 2022(2022) (2022) - David Couvin, Iñaki Cervera-Marzal, Audrey David, Yann Reynaud, Nalin Rastogi:
SITVITBovis - a publicly available database and mapping tool to get an improved overview of animal and human cases caused by Mycobacterium bovis. Database J. Biol. Databases Curation 2022(2022) (2022) - Valérie de Crécy-Lagard, Rocio Amorin de Hegedus, Cecilia N. Arighi, Jill Babor, Alex Bateman, Ian Blaby, Crysten Blaby-Haas, Alan J. Bridge, Stephen K. Burley, Stacey Cleveland, Lucy J. Colwell, Ana Conesa, Christian Dallago, Antoine Danchin, Anita de Waard, Adam Deutschbauer, Raquel Dias, Yousong Ding, Gang Fang, Iddo Friedberg, John Gerlt, Joshua Goldford, Mark Gorelik, Benjamin M. Gyori, Christopher S. Henry, Geoffrey Hutinet, Marshall Jaroch, Peter D. Karp, Liudmyla Kondratova, Zhiyong Lu, Aron Marchler-Bauer, Maria Jesus Martin, Claire D. McWhite, Gaurav D. Moghe, Paul Monaghan, Anne Morgat, Christopher J. Mungall, Darren A. Natale, William C. Nelson, Seán I. O'Donoghue, Christine A. Orengo, Katherine H. O'Toole, Predrag Radivojac, Colbie Reed, Richard J. Roberts, Dmitri Rodionov, Irina A. Rodionova, Jeffrey DePons, Lana Saleh, Gloria M. Sheynkman, Françoise Thibaud-Nissen, Paul D. Thomas, Peter Uetz, David Vallenet, Erica Watson Carter, Peter Weigele, Valerie Wood, Elisha M. Wood-Charlson, Jin Xu:
A roadmap for the functional annotation of protein families: a community perspective. Database J. Biol. Databases Curation 2022(2022) (2022) - Hong Cui, Bruce Ford, Julian R. Starr, Anton Reznicek, Limin Zhang, James A. Macklin:
Authors' attitude toward adopting a new workflow to improve the computability of phenotype publications. Database J. Biol. Databases Curation 2022(2022) (2022) - Fan Dai, Jiedan Chen, Ziqian Zhang, Fengjun Liu, Jun Li, Ting Zhao, Yan Hu, Tianzhen Zhang, Lei Fang:
COTTONOMICS: a comprehensive cotton multi-omics database. Database J. Biol. Databases Curation 2022(2022) (2022) - Marie Deckers, Julien Van Braekel, Kevin Vanneste, Dieter Deforce, Marie-Alice Fraiture, Nancy H. C. Roosens:
Correction to: FEDA (Food Enzyme Database): a web application gathering information about food enzyme preparations available on the European market. Database J. Biol. Databases Curation 2022(2022) (2022) - Arnaud Delorme, Dung Truong, Choonhan Youn, Subhashini Sivagnanam, Claire Stirm, Kenneth Yoshimoto, Russell A. Poldrack, Amitava Majumdar, Scott Makeig:
NEMAR: an open access data, tools and compute resource operating on neuroelectromagnetic data. Database J. Biol. Databases Curation 2022(2022) (2022) - Nan Deng, Canglin Wu, Ashraf Yaseen, Hulin Wu:
ImmuneData: an integrated data discovery system for immunology data repositories. Database J. Biol. Databases Curation 2022(2022) (2022) - Sanket Desai, Rohit Mishra, Suhail Ahmad, Supriya Hait, Asim Joshi, Amit Dutt:
TMC-SNPdb 2.0: an ethnic-specific database of Indian germline variants. Database J. Biol. Databases Curation 2022(2022) (2022) - Chuan Dong, Xin Wang, Cong Ma, Zhi Zeng, Dong-Kai Pu, Shuo Liu, Candy-S. Wu, Shixin Chen, Zixin Deng, Feng-Biao Guo:
Anti-CRISPRdb v2.2: an online repository of anti-CRISPR proteins including information on inhibitory mechanisms, activities and neighbors of curated anti-CRISPR proteins. Database J. Biol. Databases Curation 2022(2022) (2022) - Wanying Dou, Hemn Barzan Abdalla, Xu Chen, Changyi Sun, Xuefei Chen, Qiwen Tian, Junyi Wang, Wei Zhou, Wei Chi, Xuan Zhou, Hailv Ye, Chuyun Bi, Xuechen Tian, Yixin Yang, Aloysius Wong:
ProbResist: a database for drug-resistant probiotic bacteria. Database J. Biol. Databases Curation 2022(2022) (2022) - Arslan Erdengasileng, Qing Han, Tingting Zhao, Shubo Tian, Xin Sui, Keqiao Li, Wanjing Wang, Jian Wang, Ting Hu, Feng Pan, Yuan Zhang, Jinfeng Zhang:
Pre-trained models, data augmentation, and ensemble learning for biomedical information extraction and document classification. Database J. Biol. Databases Curation 2022(2022) (2022) - Baiyang Feng, Jing Gao:
AnthraxKP: a knowledge graph-based, Anthrax Knowledge Portal mined from biomedical literature. Database J. Biol. Databases Curation 2022(2022) (2022) - Shazia Firdous, Abhirupa Ghosh, Sudipto Saha:
BCSCdb: a database of biomarkers of cancer stem cells. Database J. Biol. Databases Curation 2022(2022) (2022) - Victor Gambarini, Olga Pantos, Joanne M. Kingsbury, Louise Weaver, Kim M. Handley, Gavin Lear:
PlasticDB: a database of microorganisms and proteins linked to plastic biodegradation. Database J. Biol. Databases Curation 2022(2022) (2022) - Giuseppe Serna Garcia, Michele Leone, Anna Bernasconi, Mark J. Carman:
GeMI: interactive interface for transformer-based Genomic Metadata Integration. Database J. Biol. Databases Curation 2022(2022) (2022)
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