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@article{DBLP:journals/biodb/AhnDJOCCD13,
author = {Joo Wook Ahn and
Abhishek Dixit and
Caroline E. Johnston and
Caroline M. Ogilvie and
David A. Collier and
Sarah Curran and
Richard J. B. Dobson},
title = {{BBGRE:} brain and body genetic resource exchange},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat067},
doi = {10.1093/DATABASE/BAT067},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/AhnDJOCCD13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/ArighiCCKWFDCSDMLHGJRMBDBLCSPHALCMCBWLWTRSNCDW13,
author = {Cecilia N. Arighi and
Ben Carterette and
K. Bretonnel Cohen and
Martin Krallinger and
W. John Wilbur and
Petra Fey and
Robert J. Dodson and
Laurel Cooper and
Ceri E. Van Slyke and
Wasila M. Dahdul and
Paula M. Mabee and
Donghui Li and
Bethany R. Harris and
Marc Gillespie and
Silvia Jimenez and
Phoebe M. Roberts and
Lisa Matthews and
Kevin G. Becker and
Harold J. Drabkin and
Susan M. Bello and
Luana Licata and
Andrew Chatr{-}aryamontri and
Mary L. Schaeffer and
Julie Park and
Melissa A. Haendel and
Kimberly Van Auken and
Yuling Li and
Juancarlos Chan and
Hans{-}Michael M{\"{u}}ller and
Hong Cui and
James P. Balhoff and
Chi{-}Yang Wu and
Zhiyong Lu and
Chih{-}Hsuan Wei and
Catalina O. Tudor and
Kalpana Raja and
Suresh Subramani and
Jeyakumar Natarajan and
Juan Miguel Cejuela and
Pratibha Dubey and
Cathy H. Wu},
title = {An overview of the BioCreative 2012 Workshop Track {III:} interactive
text mining task},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bas056},
doi = {10.1093/DATABASE/BAS056},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/ArighiCCKWFDCSDMLHGJRMBDBLCSPHALCMCBWLWTRSNCDW13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/BalakrishnanHHAC13,
author = {Rama Balakrishnan and
Midori A. Harris and
Rachael P. Huntley and
Kimberly Van Auken and
J. Michael Cherry},
title = {A guide to best practices for Gene Ontology {(GO)} manual annotation},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat054},
doi = {10.1093/DATABASE/BAT054},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/BalakrishnanHHAC13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/BertoneMYSBD13,
author = {Matthew A. Bertone and
Istv{\'{a}}n Mik{\'{o}} and
Matthew J. Yoder and
Katja C. Seltmann and
James P. Balhoff and
Andrew R. Deans},
title = {Matching arthropod anatomy ontologies to the Hymenoptera Anatomy Ontology:
results from a manual alignment},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bas057},
doi = {10.1093/DATABASE/BAS057},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/BertoneMYSBD13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/BhartiyaPGKJPJSSSRSS13,
author = {Deeksha Bhartiya and
Koustav Pal and
Sourav Ghosh and
Shruti Kapoor and
Saakshi Jalali and
Bharat Panwar and
Sakshi Jain and
Satish Sati and
Shantanu Sengupta and
Chetana Sachidanandan and
Gajendra Pal Singh Raghava and
Sridhar Sivasubbu and
Vinod Scaria},
title = {lncRNome: a comprehensive knowledgebase of human long noncoding RNAs},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat034},
doi = {10.1093/DATABASE/BAT034},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/BhartiyaPGKJPJSSSRSS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/BianchiCCAFH13,
author = {Valerio Bianchi and
Alessio Colantoni and
Alberto Calderone and
Gabriele Ausiello and
Fabrizio Ferr{\`{e}} and
Manuela Helmer{-}Citterich},
title = {{DBATE:} database of alternative transcripts expression},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat050},
doi = {10.1093/DATABASE/BAT050},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/BianchiCCAFH13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/BowesSJPJBBZV13,
author = {Jeff B. Bowes and
Kevin A. Snyder and
Christina James{-}Zorn and
Virgilio G. Ponferrada and
Chris Jarabek and
Kevin A. Burns and
Bishnu Bhattacharyya and
Aaron M. Zorn and
Peter D. Vize},
title = {The Xenbase literature curation process},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bas046},
doi = {10.1093/DATABASE/BAS046},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/BowesSJPJBBZV13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/BrozziUGME13,
author = {Alessandro Brozzi and
Lorena Urbanelli and
Pierre{-}Luc Germain and
Alessandro Magini and
Carla Emiliani},
title = {hLGDB: a database of human lysosomal genes and their regulation},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat024},
doi = {10.1093/DATABASE/BAT024},
timestamp = {Thu, 15 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/BrozziUGME13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/ChanYHC13,
author = {Wen{-}Ling Chan and
Wen{-}Kuang Yang and
Hsien{-}Da Huang and
Jan{-}Gowth Chang},
title = {pseudoMap: an innovative and comprehensive resource for identification
of siRNA-mediated mechanisms in human transcribed pseudogenes},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat001},
doi = {10.1093/DATABASE/BAT001},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/ChanYHC13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/ComeauDCCKLLPRTVVWWW13,
author = {Donald C. Comeau and
Rezarta Islamaj Dogan and
Paolo Ciccarese and
Kevin Bretonnel Cohen and
Martin Krallinger and
Florian Leitner and
Zhiyong Lu and
Yifan Peng and
Fabio Rinaldi and
Manabu Torii and
Alfonso Valencia and
Karin Verspoor and
Thomas C. Wiegers and
Cathy H. Wu and
W. John Wilbur},
title = {BioC: a minimalist approach to interoperability for biomedical text
processing},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat064},
doi = {10.1093/DATABASE/BAT064},
timestamp = {Thu, 23 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/ComeauDCCKLLPRTVVWWW13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/DaiWTPH13,
author = {Hong{-}Jie Dai and
Chi{-}Yang Wu and
Richard Tzong{-}Han Tsai and
Wen{-}Harn Pan and
Wen{-}Lian Hsu},
title = {{T-HOD:} a literature-based candidate gene database for hypertension,
obesity and diabetes},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bas061},
doi = {10.1093/DATABASE/BAS061},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/DaiWTPH13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/DavisWRKLLSJKGHMEM13,
author = {Allan Peter Davis and
Thomas C. Wiegers and
Phoebe M. Roberts and
Benjamin L. King and
Jean M. Lay and
Kelley Lennon{-}Hopkins and
Daniela Sciaky and
Robin J. Johnson and
Heather Keating and
Nigel Greene and
Robert Hernandez and
Kevin J. McConnell and
Ahmed Enayetallah and
Carolyn J. Mattingly},
title = {A CTD-Pfizer collaboration: manual curation of 88 000 scientific articles
text mined for drug-disease and drug-phenotype interactions},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat080},
doi = {10.1093/DATABASE/BAT080},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/DavisWRKLLSJKGHMEM13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/DrocLGYTGDHADLBCPDRRB13,
author = {Ga{\"{e}}tan Droc and
Delphine Larivi{\`{e}}re and
Valentin Guignon and
Nabila Yahiaoui and
Dominique This and
Olivier Garsmeur and
Alexis Dereeper and
Chantal Hamelin and
Xavier Argout and
Jean{-}Fran{\c{c}}ois Dufayard and
Juliette Lengelle and
Franc{-}Christophe Baurens and
Alberto Cenci and
Bertrand Pitollat and
Ang{\'{e}}lique D'Hont and
Manuel Ruiz and
Mathieu Rouard and
St{\'{e}}phanie Bocs},
title = {The Banana Genome Hub},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat035},
doi = {10.1093/DATABASE/BAT035},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/DrocLGYTGDHADLBCPDRRB13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/EngelC13,
author = {Stacia R. Engel and
J. Michael Cherry},
title = {The new modern era of yeast genomics: community sequencing and the
resulting annotation of multiple \emph{Saccharomyces cerevisiae} strains
at the \emph{Saccharomyces} Genome Database},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat012},
doi = {10.1093/DATABASE/BAT012},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/EngelC13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/EvansJLBCPM13,
author = {Kate Evans and
Sook Jung and
Taein Lee and
Lisa Brutcher and
Ilhyung Cho and
Cameron Peace and
Dorrie Main},
title = {Addition of a breeding database in the Genome Database for Rosaceae},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat078},
doi = {10.1093/DATABASE/BAT078},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/EvansJLBCPM13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/GanzfriedRHRTJWABPHW13,
author = {Benjamin Frederick Ganzfried and
Markus Riester and
Benjamin Haibe{-}Kains and
Thomas Risch and
Svitlana Tyekucheva and
Ina Jazic and
Xin Victoria Wang and
Mahnaz Ahmadifar and
Michael J. Birrer and
Giovanni Parmigiani and
Curtis Huttenhower and
Levi Waldron},
title = {curatedOvarianData: clinically annotated data for the ovarian cancer
transcriptome},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat013},
doi = {10.1093/DATABASE/BAT013},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/GanzfriedRHRTJWABPHW13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/GaudetMRABCKOY13,
author = {Pascale Gaudet and
Monica C. Munoz{-}Torres and
Marc Robinson{-}Rechavi and
Teresa K. Attwood and
Alex Bateman and
J. Michael Cherry and
Renate Kania and
Claire O'Donovan and
Chisato Yamasaki},
title = {DATABASE, \emph{The Journal of Biological Databases and Curation},
is now the official journal of the International Society for Biocuration},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat077},
doi = {10.1093/DATABASE/BAT077},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/GaudetMRABCKOY13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/GobeillPVR13,
author = {Julien Gobeill and
Emilie Pasche and
Dina Vishnyakova and
Patrick Ruch},
title = {Managing the data deluge: data-driven {GO} category assignment improves
while complexity of functional annotation increases},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat041},
doi = {10.1093/DATABASE/BAT041},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/GobeillPVR13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/GrandvalFGBBFWBO13,
author = {Philippe Grandval and
Aur{\'{e}}lie J. Fabre and
Pascaline Gaildrat and
St{\'{e}}phanie Baert{-}Desurmont and
Marie{-}Pierre Buisine and
Anthony Ferrari and
Qing Wang and
Christophe B{\'{e}}roud and
Sylviane Olschwang},
title = {{UMD-MLH1/MSH2/MSH6} databases: description and analysis of genetic
variations in French Lynch syndrome families},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat036},
doi = {10.1093/DATABASE/BAT036},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/GrandvalFGBBFWBO13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/GuoSSWS13,
author = {Andy M. Guo and
Kun Sun and
Xiaoxi Su and
Huating Wang and
Hao Sun},
title = {YY1TargetDB: an integral information resource for Yin Yang 1 target
loci},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat007},
doi = {10.1093/DATABASE/BAT007},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/GuoSSWS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/HaasRAKSBS13,
author = {Juergen Haas and
Steven Roth and
Konstantin Arnold and
Florian Kiefer and
Tobias Schmidt and
Lorenza Bordoli and
Torsten Schwede},
title = {The Protein Model Portal - a comprehensive resource for protein structure
and model information},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat031},
doi = {10.1093/DATABASE/BAT031},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/HaasRAKSBS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/HeavnerSPW13,
author = {Benjamin D. Heavner and
Kieran Smallbone and
Nathan D. Price and
Larry P. Walker},
title = {Version 6 of the consensus yeast metabolic network refines biochemical
coverage and improves model performance},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat059},
doi = {10.1093/DATABASE/BAT059},
timestamp = {Thu, 03 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/HeavnerSPW13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/HiguerueloJB13,
author = {Alicia P. Higueruelo and
Harry Jubb and
Tom L. Blundell},
title = {{TIMBAL} v2: update of a database holding small molecules modulating
protein-protein interactions},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat039},
doi = {10.1093/DATABASE/BAT039},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/HiguerueloJB13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/HongLBJJYKPKS13,
author = {Dongwan Hong and
Jongkeun Lee and
Thomas Bleazard and
Hyunchul Jung and
Young Seok Ju and
Saet{-}Byeol Yu and
Sujung Kim and
Sung{-}Soo Park and
Jong{-}Il Kim and
Jeong{-}Sun Seo},
title = {{TIARA} genome database: update 2013},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat003},
doi = {10.1093/DATABASE/BAT003},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/HongLBJJYKPKS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/HsuK13,
author = {Yi{-}Yu Hsu and
Hung{-}Yu Kao},
title = {CoIN: a network analysis for document triage},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat076},
doi = {10.1093/DATABASE/BAT076},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/HsuK13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/JamiesonRRSN13,
author = {Daniel G. Jamieson and
Phoebe M. Roberts and
David L. Robertson and
Ben Sidders and
Goran Nenadic},
title = {Cataloging the biomedical world of pain through semi-automated curation
of molecular interactions},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat033},
doi = {10.1093/DATABASE/BAT033},
timestamp = {Sun, 04 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/JamiesonRRSN13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/JezequelFCGGRC13,
author = {Pascal J{\'{e}}z{\'{e}}quel and
Jean{-}S{\'{e}}bastien Fr{\'{e}}nel and
Lo{\"{\i}}c Campion and
Catherine Gu{\'{e}}rin{-}Charbonnel and
Wilfried Gouraud and
Gabriel Ricolleau and
Mario Campone},
title = {bc-GenExMiner 3.0: new mining module computes breast cancer gene expression
correlation analyses},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bas060},
doi = {10.1093/DATABASE/BAS060},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/JezequelFCGGRC13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/JutyNHL13,
author = {Nick S. Juty and
Nicolas Le Nov{\`{e}}re and
Henning Hermjakob and
Camille Laibe},
title = {Towards the Collaborative Curation of the Registry underlying identifiers.org},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat017},
doi = {10.1093/DATABASE/BAT017},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/JutyNHL13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/KaranyiHHPM13,
author = {Zsolt Kar{\'{a}}nyi and
Imre Holb and
L{\'{a}}szl{\'{o}} Hornok and
Istv{\'{a}}n P{\'{o}}csi and
M{\'{a}}rton Miskei},
title = {{FSRD:} fungal stress response database},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat037},
doi = {10.1093/DATABASE/BAT037},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/KaranyiHHPM13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/KhuranaSJS13,
author = {Pankaj Khurana and
Ragumani Sugadev and
Jaspreet Jain and
Shashi Bala Singh},
title = {HypoxiaDB: a database of hypoxia-regulated proteins},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat074},
doi = {10.1093/DATABASE/BAT074},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/KhuranaSJS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/KongCFZQ13,
author = {Lei Kong and
Lu Cheng and
Liya Fan and
Min Zhao and
Hong Qu},
title = {IQdb: an intelligence quotient score-associated gene resource for
human intelligence},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat063},
doi = {10.1093/DATABASE/BAT063},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/KongCFZQ13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/KrystkowiakLDKPKD13,
author = {Izabella Krystkowiak and
Jakub Lenart and
Konrad J. Debski and
Piotr Kuterba and
Michal Petas and
Bozena Kaminska and
Michal Dabrowski},
title = {Nencki Genomics Database - Ensembl funcgen enhanced with intersections,
user data and genome-wide {TFBS} motifs},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat069},
doi = {10.1093/DATABASE/BAT069},
timestamp = {Mon, 02 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/KrystkowiakLDKPKD13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/LaulederkindLSHWNPLPDS13,
author = {Stanley J. F. Laulederkind and
Weisong Liu and
Jennifer R. Smith and
G. Thomas Hayman and
Shur{-}Jen Wang and
Rajni Nigam and
Victoria Petri and
Timothy Lowry and
Jeff de Pons and
Melinda R. Dwinell and
Mary Shimoyama},
title = {PhenoMiner: quantitative phenotype curation at the rat genome database},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat015},
doi = {10.1093/DATABASE/BAT015},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/LaulederkindLSHWNPLPDS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/LiJAKR13,
author = {Chen Li and
Antonio Jimeno{-}Yepes and
Miguel Arregui and
Harald Kirsch and
Dietrich Rebholz{-}Schuhmann},
title = {PCorral - interactive mining of protein interactions from {MEDLINE}},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat030},
doi = {10.1093/DATABASE/BAT030},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/LiJAKR13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/LiKMNL13,
author = {Weizhong Li and
Bartosz Kondratowicz and
Hamish McWilliam and
Stephane Nauche and
Rodrigo Lopez},
title = {The Annotation-enriched non-redundant patent sequence databases},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat005},
doi = {10.1093/DATABASE/BAT005},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/LiKMNL13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/LiLDXD13,
author = {Qingyan Li and
Shuabin Lian and
Zhiming Dai and
Qian Xiang and
Xianhua Dai},
title = {{BGDB:} a database of bivalent genes},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat057},
doi = {10.1093/DATABASE/BAT057},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/LiLDXD13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/LiangKD13,
author = {Chunguang Liang and
Beate Kr{\"{u}}ger and
Thomas Dandekar},
title = {GoSynthetic database tool to analyse natural and engineered molecular
processes},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat043},
doi = {10.1093/DATABASE/BAT043},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/LiangKD13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/LiuZTCZ13,
author = {Xiaoping Liu and
Xiaodong Zhang and
Weihua Tang and
Luonan Chen and
Xing{-}Ming Zhao},
title = {\emph{eFG}: an electronic resource for \emph{Fusarium graminearum}},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat042},
doi = {10.1093/DATABASE/BAT042},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/LiuZTCZ13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/LyneSLAHKSM13,
author = {Mike Lyne and
Richard N. Smith and
Rachel Lyne and
Jelena Aleksic and
Fengyuan Hu and
Alex Kalderimis and
Radek Stepan and
Gos Micklem},
title = {metabolicMine: an integrated genomics, genetics and proteomics data
warehouse for common metabolic disease research},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat060},
doi = {10.1093/DATABASE/BAT060},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/LyneSLAHKSM13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/MahajanAIOBS13,
author = {Swapnil Mahajan and
Garima Agarwal and
Mohammed Iftekhar and
Bernard O. Offmann and
Alexandre G. de Brevern and
Narayanaswamy Srinivasan},
title = {DoSA: Database of Structural Alignments},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat048},
doi = {10.1093/DATABASE/BAT048},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/MahajanAIOBS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/MathiasHYZBUO13,
author = {Stephen L. Mathias and
Jarrett Hines{-}Kay and
Jeremy J. Yang and
Gergely Zahor{\'{a}}nszky{-}K{\"{o}}halmi and
Cristian Bologa and
Oleg Ursu and
Tudor I. Oprea},
title = {The {CARLSBAD} Database: {A} Confederated Database of Chemical Bioactivities},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat044},
doi = {10.1093/DATABASE/BAT044},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/MathiasHYZBUO13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/MayerMOJBDCKLSOVHSME13,
author = {Gerhard Mayer and
Luisa Montecchi{-}Palazzi and
David Ovelleiro and
Andrew R. Jones and
Pierre{-}Alain Binz and
Eric W. Deutsch and
Matthew Chambers and
Marius Kallhardt and
Fredrik Levander and
James Shofstahl and
Sandra E. Orchard and
Juan Antonio Vizca{\'{\i}}no and
Henning Hermjakob and
Christian Stephan and
Helmut E. Meyer and
Martin Eisenacher},
title = {The {HUPO} proteomics standards initiative- mass spectrometry controlled
vocabulary},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat009},
doi = {10.1093/DATABASE/BAT009},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/MayerMOJBDCKLSOVHSME13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/MistryCEDGFBP13,
author = {Jaina Mistry and
Penny C. Coggill and
Ruth Y. Eberhardt and
Antonio Deiana and
Andrea Giansanti and
Robert D. Finn and
Alex Bateman and
Marco Punta},
title = {The challenge of increasing Pfam coverage of the human proteome},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat023},
doi = {10.1093/DATABASE/BAT023},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/MistryCEDGFBP13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/MistryCEDGFBP13a,
author = {Jaina Mistry and
Penny C. Coggill and
Ruth Y. Eberhardt and
Antonio Deiana and
Andrea Giansanti and
Robert D. Finn and
Alex Bateman and
Marco Punta},
title = {The challenge of increasing Pfam coverage of the human proteome},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat040},
doi = {10.1093/DATABASE/BAT040},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/MistryCEDGFBP13a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/Mutowo-MeullenetHDASMOA13,
author = {Prudence Mutowo{-}Meullenet and
Rachael P. Huntley and
Emily C. Dimmer and
Yasmin Alam{-}Faruque and
Tony Sawford and
Maria Jesus Martin and
Claire O'Donovan and
Rolf Apweiler},
title = {Use of Gene Ontology Annotation to understand the peroxisome proteome
in humans},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bas062},
doi = {10.1093/DATABASE/BAS062},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/Mutowo-MeullenetHDASMOA13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/NagaiI13,
author = {Yoko Nagai and
Tadashi Imanishi},
title = {RAvariome: a genetic risk variants database for rheumatoid arthritis
based on assessment of reproducibility between or within human populations},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat073},
doi = {10.1093/DATABASE/BAT073},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/NagaiI13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/NagyP13,
author = {Alinda Nagy and
L{\'{a}}szl{\'{o}} Patthy},
title = {MisPred: a resource for identification of erroneous protein sequences
in public databases},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat053},
doi = {10.1093/DATABASE/BAT053},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/NagyP13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/NevesDMLSSFKL13,
author = {Mariana L. Neves and
Alexander Damaschun and
Nancy Mah and
Fritz Lekschas and
Stefanie Seltmann and
Harald Stachelscheid and
Jean{-}Fred Fontaine and
Andreas Kurtz and
Ulf Leser},
title = {Preliminary evaluation of the CellFinder literature curation pipeline
for gene expression in kidney cells and anatomical parts},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat020},
doi = {10.1093/DATABASE/BAT020},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/NevesDMLSSFKL13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/OberlinJBF13,
author = {Andrew Oberlin and
Dominika A. Jurkovic and
Mitchell F. Balish and
Iddo Friedberg},
title = {Biological Database of Images and Genomes: tools for community annotations
linking image and genomic information},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat016},
doi = {10.1093/DATABASE/BAT016},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/OberlinJBF13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/PanABDEGHLLPPQRRRRRTTWC13,
author = {Huaqin (Helen) Pan and
Mary{-}Anne Ardini and
Vesselina D. Bakalov and
Michael DeLatte and
Paul Eggers and
Laxminarayana Ganapathi and
Craig R. Hollingsworth and
Joshua Levy and
Sheping Li and
Joseph Pratt and
Norma Pugh and
Ying Qin and
Rebekah Rasooly and
Helen Ray and
Jean E. Richardson and
Amanda Flynn Riley and
Susan M. Rogers and
Sylvia Tan and
Charles F. Turner and
Stacie White and
Philip C. Cooley},
title = {'What's in the {NIDDK} CDR?' - public query tools for the {NIDDK}
central data repository},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bas058},
doi = {10.1093/DATABASE/BAS058},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/PanABDEGHLLPPQRRRRRTTWC13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/PercudaniCP13,
author = {Riccardo Percudani and
Davide Carnevali and
Vincenzo Puggioni},
title = {Ureidoglycolate hydrolase, amidohydrolase, lyase: how errors in biological
databases are incorporated in scientific papers and vice versa},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat071},
doi = {10.1093/DATABASE/BAT071},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/PercudaniCP13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/PiovesanPMFFC13,
author = {Damiano Piovesan and
Giuseppe Profiti and
Pier Luigi Martelli and
Piero Fariselli and
Luca Fontanesi and
Rita Casadio},
title = {{SUS-BAR:} a database of pig proteins with statistically validated
structural and functional annotation},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat065},
doi = {10.1093/DATABASE/BAT065},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/PiovesanPMFFC13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/PriyaJ13,
author = {Pushp Priya and
Mukesh Jain},
title = {RiceSRTFDB: {A} database of rice transcription factors containing
comprehensive expression, \emph{cis}-regulatory element and mutant
information to facilitate gene function analysis},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat027},
doi = {10.1093/DATABASE/BAT027},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/PriyaJ13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/PujarMBESM13,
author = {Anuradha Pujar and
Naama Menda and
Aureliano Bombarely and
Jeremy D. Edwards and
Susan Strickler and
Lukas A. Mueller},
title = {From manual curation to visualization of gene families and networks
across Solanaceae plant species},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat028},
doi = {10.1093/DATABASE/BAT028},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/PujarMBESM13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/RajaSN13,
author = {Kalpana Raja and
Suresh Subramani and
Jeyakumar Natarajan},
title = {PPInterFinder - a mining tool for extracting causal relations on human
proteins from literature},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bas052},
doi = {10.1093/DATABASE/BAS052},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/RajaSN13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/RangelNDMG13,
author = {Luiz Thib{\'{e}}rio Rangel and
Jeniffer Novaes and
Alan M. Durham and
Alda Maria B. N. Madeira and
Arthur Gruber},
title = {The \emph{Eimeria} Transcript {DB:} an integrated resource for annotated
transcripts of protozoan parasites of the genus \emph{Eimeria}},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat006},
doi = {10.1093/DATABASE/BAT006},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/RangelNDMG13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/RappaportNSTGSBBMSL13,
author = {Noa Rappaport and
Noam Nativ and
Gil Stelzer and
Michal Twik and
Yaron Guan{-}Golan and
Tsippi Iny Stein and
Iris Bahir and
Frida Belinky and
C. Paul Morrey and
Marilyn Safran and
Doron Lancet},
title = {MalaCards: an integrated compendium for diseases and their annotation},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat018},
doi = {10.1093/DATABASE/BAT018},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/RappaportNSTGSBBMSL13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/Rawlings13,
author = {Neil D. Rawlings},
title = {Identification and prioritization of novel uncharacterized peptidases
for biochemical characterization},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat022},
doi = {10.1093/DATABASE/BAT022},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/Rawlings13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/RinaldiCHSGRV13,
author = {Fabio Rinaldi and
Simon Clematide and
Simon Hafner and
Gerold Schneider and
Gintare Grigonyte and
Martin Romacker and
Th{\'{e}}r{\`{e}}se Vachon},
title = {Using the OntoGene pipeline for the triage task of BioCreative 2012},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bas053},
doi = {10.1093/DATABASE/BAS053},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/RinaldiCHSGRV13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/RoeyOKDRHG13,
author = {Kim Van Roey and
Sandra E. Orchard and
Samuel Kerrien and
Marine Dumousseau and
Sylvie Ricard{-}Blum and
Henning Hermjakob and
Toby J. Gibson},
title = {Capturing cooperative interactions with the {PSI-MI} format},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat066},
doi = {10.1093/DATABASE/BAT066},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/RoeyOKDRHG13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/RosikiewiczCNRB13,
author = {Marta Rosikiewicz and
Aur{\'{e}}lie Comte and
Anne Niknejad and
Marc Robinson{-}Rechavi and
Frederic B. Bastian},
title = {Uncovering hidden duplicated content in public transcriptomics data},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat010},
doi = {10.1093/DATABASE/BAT010},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/RosikiewiczCNRB13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/RossARHW13,
author = {Karen Ross and
Cecilia N. Arighi and
Jia Ren and
Hongzhan Huang and
Cathy H. Wu},
title = {Construction of protein phosphorylation networks by data mining, text
mining and ontology integration: analysis of the spindle checkpoint},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat038},
doi = {10.1093/DATABASE/BAT038},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/RossARHW13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/RothwellPNMMGMKEWS13,
author = {Joseph A. Rothwell and
Jara Perez{-}Jimenez and
Vanessa Neveu and
Alexander Medina{-}Rem{\'{o}}n and
Nouha M'Hiri and
Paula Garc{\'{\i}}a{-}Lobato and
Claudine Manach and
Craig Knox and
Roman Eisner and
David S. Wishart and
Augustin Scalbert},
title = {Phenol-Explorer 3.0: a major update of the Phenol-Explorer database
to incorporate data on the effects of food processing on polyphenol
content},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat070},
doi = {10.1093/DATABASE/BAT070},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/RothwellPNMMGMKEWS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/SadowskiBSSDRBODBT13,
author = {Ivan Sadowski and
Bobby{-}Joe Breitkreutz and
Chris Stark and
Ting{-}Cheng Su and
Matthew Dahabieh and
Sheetal Raithatha and
Wendy Bernhard and
Rose Oughtred and
Kara Dolinski and
Kris Barreto and
Mike Tyers},
title = {The PhosphoGRID \emph{Saccharomyces cerevisiae} protein phosphorylation
site database: version 2.0 update},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat026},
doi = {10.1093/DATABASE/BAT026},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/SadowskiBSSDRBODBT13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/SalekHCHWMMBRSS13,
author = {Reza M. Salek and
Kenneth Haug and
Pablo Conesa and
Janna Hastings and
Mark Williams and
Tejasvi Mahendraker and
Eamonn Maguire and
Alejandra N. Gonz{\'{a}}lez{-}Beltr{\'{a}}n and
Philippe Rocca{-}Serra and
Susanna{-}Assunta Sansone and
Christoph Steinbeck},
title = {The MetaboLights repository: curation challenges in metabolomics},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat029},
doi = {10.1093/DATABASE/BAT029},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/SalekHCHWMMBRSS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/SandersonFCJFBM13,
author = {Lacey{-}Anne Sanderson and
Stephen P. Ficklin and
Chun{-}Huai Cheng and
Sook Jung and
F. Alex Feltus and
Kirstin E. Bett and
Dorrie Main},
title = {Tripal v1.1: a standards-based toolkit for construction of online
genetic and genomic databases},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat075},
doi = {10.1093/DATABASE/BAT075},
timestamp = {Wed, 05 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/SandersonFCJFBM13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/SarikaAIRK13,
author = {Sarika Jaiswal and
Vasu Arora and
Mir Asif Iquebal and
Anil Rai and
Dinesh Kumar},
title = {PIPEMicroDB: microsatellite database and primer generation tool for
pigeonpea genome},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bas054},
doi = {10.1093/DATABASE/BAS054},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/SarikaAIRK13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/SaundersIRJH13,
author = {Rebecca E. Saunders and
Rachael Instrell and
Rossella Rispoli and
Ming Jiang and
Michael Howell},
title = {{HTS-DB:} an online resource to publish and query data from functional
genomics high-throughput siRNA screening projects},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat072},
doi = {10.1093/DATABASE/BAT072},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/SaundersIRJH13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/SchreyerB13,
author = {Adrian Schreyer and
Tom L. Blundell},
title = {{CREDO:} a structural interactomics database for drug discovery},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat049},
doi = {10.1093/DATABASE/BAT049},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/SchreyerB13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/SilbermannWPF13,
author = {Jascha Silbermann and
Catrin Wernicke and
Heike Pospisil and
Marcus Frohme},
title = {RefPrimeCouch - a reference gene primer CouchApp},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat081},
doi = {10.1093/DATABASE/BAT081},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/SilbermannWPF13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/SinigagliaARCV13,
author = {Marialva Sinigaglia and
Dinler Amaral Antunes and
Maur{\'{\i}}cio Menegatti Rigo and
Jos{\'{e}} Artur Bogo Chies and
Gustavo Fioravanti Vieira},
title = {CrossTope: a curate repository of 3D structures of immunogenic peptide:
{MHC} complexes},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat002},
doi = {10.1093/DATABASE/BAT002},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/SinigagliaARCV13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/SmedleyOKRWRLM13,
author = {Damian Smedley and
Anika Oellrich and
Sebastian K{\"{o}}hler and
Barbara J. Ruef and
Monte Westerfield and
Peter N. Robinson and
Suzanna Lewis and
Christopher J. Mungall},
title = {PhenoDigm: analyzing curated annotations to associate animal models
with human diseases},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat025},
doi = {10.1093/DATABASE/BAT025},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/SmedleyOKRWRLM13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/SteinbachAACDFKKLLMMPRVVQ13,
author = {Delphine Steinbach and
Michael Alaux and
Joelle Amselem and
Nathalie Choisne and
Sophie Durand and
Rapha{\"{e}}l Flores and
Aminah{-}Olivia Keliet and
Erik Kimmel and
Nicolas Lapalu and
Isabelle Luyten and
C{\'{e}}lia Michotey and
Nacer Mohellibi and
Cyril Pommier and
S{\'{e}}bastien Reboux and
Doroth{\'{e}}e Valdenaire and
Daphn{\'{e}} Verdelet and
Hadi Quesneville},
title = {GnpIS: an information system to integrate genetic and genomic data
from plants and fungi},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat058},
doi = {10.1093/DATABASE/BAT058},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/SteinbachAACDFKKLLMMPRVVQ13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/StewardGTSKGWRH13,
author = {Charles A. Steward and
Jose M. Gonzalez and
Stephen J. Trevanion and
Daniel Sheppard and
Giselle Kerry and
James G. R. Gilbert and
Linda S. Wicker and
Jane Rogers and
Jennifer L. Harrow},
title = {The non-obese diabetic mouse sequence, annotation and variation resource:
an aid for investigating type 1 diabetes},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat032},
doi = {10.1093/DATABASE/BAT032},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/StewardGTSKGWRH13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/TakeshitaGSMRZMJ13,
author = {Louise Y. C. Takeshita and
Faviel F. Gonzalez{-}Galarza and
Eduardo Jos{\'{e}} Melo dos Santos and
Maria Helena Thomaz Maia and
Mushome M. Rahman and
Syed M. S. Zain and
Derek Middleton and
Andrew R. Jones},
title = {A database for curating the associations between killer cell immunoglobulin-like
receptors and diseases in worldwide populations},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat021},
doi = {10.1093/DATABASE/BAT021},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/TakeshitaGSMRZMJ13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/TraversPSHK13,
author = {Michael Travers and
Suzanne M. Paley and
Jeff Shrager and
Timothy A. Holland and
Peter D. Karp},
title = {Groups: knowledge spreadsheets for symbolic biocomputing},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat061},
doi = {10.1093/DATABASE/BAT061},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/TraversPSHK13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/TripathiCBHHTBKL13,
author = {Sushil Tripathi and
Karen R. Christie and
Rama Balakrishnan and
Rachael P. Huntley and
David P. Hill and
Liv Thommesen and
Judith A. Blake and
Martin Kuiper and
Astrid L{\ae}greid},
title = {Gene Ontology annotation of sequence-specific {DNA} binding transcription
factors: setting the stage for a large-scale curation effort},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat062},
doi = {10.1093/DATABASE/BAT062},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/TripathiCBHHTBKL13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/VeraPPLKP13,
author = {Roberto Vera and
Yasset P{\'{e}}rez{-}Riverol and
Sonia P{\'{e}}rez and
Bal{\'{a}}zs Ligeti and
Attila Kert{\'{e}}sz{-}Farkas and
S{\'{a}}ndor Pongor},
title = {\emph{JBioWH}: an open-source Java framework for bioinformatics data
integration},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat051},
doi = {10.1093/DATABASE/BAT051},
timestamp = {Wed, 19 May 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/VeraPPLKP13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/VerspoorJCMHTP13,
author = {Karin Verspoor and
Antonio Jimeno{-}Yepes and
Lawrence Cavedon and
Tara McIntosh and
Asha Herten{-}Crabb and
Zo{\"{e}} Thomas and
John{-}Paul Plazzer},
title = {Annotating the biomedical literature for the human variome},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat019},
doi = {10.1093/DATABASE/BAT019},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/VerspoorJCMHTP13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/VincentDRCMBAM13,
author = {Jonathan Vincent and
Zhanwu Dai and
Catherine Ravel and
Fr{\'{e}}d{\'{e}}ric Choulet and
Said Mouzeyar and
M. Fouad Bouzidi and
Marie Agier and
Pierre Martre},
title = {dbWFA: a web-based database for functional annotation of \emph{Triticum
aestivum} transcripts},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat014},
doi = {10.1093/DATABASE/BAT014},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/VincentDRCMBAM13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/WangLHSPLNDWMSJ13,
author = {Shur{-}Jen Wang and
Stanley J. F. Laulederkind and
G. Thomas Hayman and
Jennifer R. Smith and
Victoria Petri and
Timothy Lowry and
Rajni Nigam and
Melinda R. Dwinell and
Elizabeth A. Worthey and
Diane H. Munzenmaier and
Mary Shimoyama and
Howard J. Jacob},
title = {Analysis of disease-associated objects at the Rat Genome Database},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat046},
doi = {10.1093/DATABASE/BAT046},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/WangLHSPLNDWMSJ13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/WanichthanarakCMP13,
author = {Kwanjeera Wanichthanarak and
Marija Cvijovic and
Andrea Molt and
Dina Petranovic},
title = {yApoptosis: yeast apoptosis database},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat068},
doi = {10.1093/DATABASE/BAT068},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/WanichthanarakCMP13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/WeissMHSSMC13,
author = {Verena Weiss and
Alejandra Medina{-}Rivera and
Araceli M. Huerta and
Alberto Santos{-}Zavaleta and
Heladia Salgado and
Enrique Morett and
Julio Collado{-}Vides},
title = {Evidence classification of high-throughput protocols and confidence
integration in RegulonDB},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bas059},
doi = {10.1093/DATABASE/BAS059},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/WeissMHSSMC13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/WileySB13,
author = {Laura K. Wiley and
R. Michael Sivley and
William S. Bush},
title = {Rapid storage and retrieval of genomic intervals from a relational
database system using nested containment lists},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat056},
doi = {10.1093/DATABASE/BAT056},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/WileySB13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/WilmingHCHGCJLPSWWBH13,
author = {Laurens G. Wilming and
Elizabeth A. Hart and
Penny C. Coggill and
Roger Horton and
James G. R. Gilbert and
Chris Clee and
Matt Jones and
Christine Lloyd and
Sophie Palmer and
Sarah Sims and
Siobhan Whitehead and
David Wiley and
Stephan Beck and
Jennifer L. Harrow},
title = {Sequencing and comparative analysis of the gorilla {MHC} genomic sequence},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat011},
doi = {10.1093/DATABASE/BAT011},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/WilmingHCHGCJLPSWWBH13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/WongKHHC13,
author = {Edith D. Wong and
Kalpana Karra and
Benjamin C. Hitz and
Eurie L. Hong and
J. Michael Cherry},
title = {The YeastGenome app: the \emph{Saccharomyces} Genome Database at your
fingertips},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat004},
doi = {10.1093/DATABASE/BAT004},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/WongKHHC13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/WuLYLFC13,
author = {Leihong Wu and
Xiang Li and
Jihong Yang and
Yufeng Liu and
Xiaohui Fan and
Yiyu Cheng},
title = {CHD@ZJU: a knowledgebase providing network-based research platform
on coronary heart disease},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat047},
doi = {10.1093/DATABASE/BAT047},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/WuLYLFC13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/XiongLFYTCFWZM13,
author = {Jie Xiong and
Yuming Lu and
Jinmei Feng and
Dong{-}Xia Yuan and
Miao Tian and
Yue Chang and
Chengjie Fu and
Guangying Wang and
Honghui Zeng and
Wei Miao},
title = {\emph{Tetrahymena} Functional Genomics Database (TetraFGD): an integrated
resource for \emph{Tetrahymena} functional genomics},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat008},
doi = {10.1093/DATABASE/BAT008},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/XiongLFYTCFWZM13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/XuBDCTKKLM13,
author = {Huilei Xu and
Caroline Baroukh and
Ruth Dannenfelser and
Edward Y. Chen and
Christopher M. Tan and
Yan Kou and
Yujin E. Kim and
Ihor Lemischka and
Avi Ma'ayan},
title = {{ESCAPE:} database for integrating high-content published data collected
from human and mouse embryonic stem cells},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat045},
doi = {10.1093/DATABASE/BAT045},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/XuBDCTKKLM13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/XuZXHSZ13,
author = {Hongen Xu and
Hua{-}Hao Zhang and
Tian Xia and
Min{-}Jin Han and
Yi{-}Hong Shen and
Ze Zhang},
title = {BmTEdb: a collective database of transposable elements in the silkworm
genome},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat055},
doi = {10.1093/DATABASE/BAT055},
timestamp = {Wed, 28 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/XuZXHSZ13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/YangYLWXWFC13,
author = {Zhenzhong Yang and
Jihong Yang and
Wei Liu and
Leihong Wu and
Li Xing and
Yi Wang and
Xiaohui Fan and
Yiyu Cheng},
title = {T2D@ZJU: a knowledgebase integrating heterogeneous connections associated
with type 2 diabetes mellitus},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat052},
doi = {10.1093/DATABASE/BAT052},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/YangYLWXWFC13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/YoungFDSWZSQPB13,
author = {Jasmine Young and
Zukang Feng and
Dimitris Dimitropoulos and
Raul Sala and
John D. Westbrook and
Marina Zhuravleva and
Chenghua Shao and
Martha Quesada and
Ezra Peisach and
Helen M. Berman},
title = {Chemical annotation of small and peptide-like molecules at the Protein
Data Bank},
journal = {Database J. Biol. Databases Curation},
volume = {2013},
year = {2013},
url = {https://doi.org/10.1093/database/bat079},
doi = {10.1093/DATABASE/BAT079},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/biodb/YoungFDSWZSQPB13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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