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@inproceedings{DBLP:conf/wabi/DrinkwaterC15, author = {Benjamin Drinkwater and Michael A. Charleston}, editor = {Mihai Pop and H{\'{e}}l{\`{e}}ne Touzet}, title = {A Sub-quadratic Time and Space Complexity Solution for the Dated Tree Reconciliation Problem for Select Tree Topologies}, booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI} 2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9289}, pages = {93--107}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-662-48221-6\_7}, doi = {10.1007/978-3-662-48221-6\_7}, timestamp = {Thu, 23 Jun 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/wabi/DrinkwaterC15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/wabi/DumaCBCCL15, author = {Denise Duma and Francesca Cordero and Marco Beccuti and Gianfranco Ciardo and Timothy J. Close and Stefano Lonardi}, editor = {Mihai Pop and H{\'{e}}l{\`{e}}ne Touzet}, title = {Scrible: Ultra-Accurate Error-Correction of Pooled Sequenced Reads}, booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI} 2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9289}, pages = {162--174}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-662-48221-6\_12}, doi = {10.1007/978-3-662-48221-6\_12}, timestamp = {Mon, 03 Jan 2022 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/wabi/DumaCBCCL15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/wabi/FridG15, author = {Yelena Frid and Dan Gusfield}, editor = {Mihai Pop and H{\'{e}}l{\`{e}}ne Touzet}, title = {A Sparsified Four-Russian Algorithm for {RNA} Folding}, booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI} 2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9289}, pages = {271--285}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-662-48221-6\_20}, doi = {10.1007/978-3-662-48221-6\_20}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/wabi/FridG15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/wabi/GibsonG15, author = {Todd A. Gibson and Debra S. Goldberg}, editor = {Mihai Pop and H{\'{e}}l{\`{e}}ne Touzet}, title = {The Topological Profile of a Model of Protein Network Evolution Can Direct Model Improvement}, booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI} 2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9289}, pages = {40--52}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-662-48221-6\_3}, doi = {10.1007/978-3-662-48221-6\_3}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/wabi/GibsonG15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/wabi/GrossiIMPPRV15, author = {Roberto Grossi and Costas S. Iliopoulos and Robert Mercas and Nadia Pisanti and Solon P. Pissis and Ahmad Retha and Fatima Vayani}, editor = {Mihai Pop and H{\'{e}}l{\`{e}}ne Touzet}, title = {Circular Sequence Comparison with q-grams}, booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI} 2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9289}, pages = {203--216}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-662-48221-6\_15}, doi = {10.1007/978-3-662-48221-6\_15}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/wabi/GrossiIMPPRV15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/wabi/GusfieldN15, author = {Dan Gusfield and Rasmus Nielsen}, editor = {Mihai Pop and H{\'{e}}l{\`{e}}ne Touzet}, title = {Association Mapping for Compound Heterozygous Traits Using Phenotypic Distance and Integer Programming}, booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI} 2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9289}, pages = {136--147}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-662-48221-6\_10}, doi = {10.1007/978-3-662-48221-6\_10}, timestamp = {Wed, 14 Nov 2018 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/wabi/GusfieldN15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/wabi/HenriquesM15, author = {Rui Henriques and Sara C. Madeira}, editor = {Mihai Pop and H{\'{e}}l{\`{e}}ne Touzet}, title = {BicNET: Efficient Biclustering of Biological Networks to Unravel Non-Trivial Modules}, booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI} 2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9289}, pages = {1--15}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-662-48221-6\_1}, doi = {10.1007/978-3-662-48221-6\_1}, timestamp = {Mon, 15 Jun 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/wabi/HenriquesM15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/wabi/HolleyWS15, author = {Guillaume Holley and Roland Wittler and Jens Stoye}, editor = {Mihai Pop and H{\'{e}}l{\`{e}}ne Touzet}, title = {Bloom Filter Trie - {A} Data Structure for Pan-Genome Storage}, booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI} 2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9289}, pages = {217--230}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-662-48221-6\_16}, doi = {10.1007/978-3-662-48221-6\_16}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/wabi/HolleyWS15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/wabi/HujdurovicKMRT15, author = {Ademir Hujdurovic and Ursa Kacar and Martin Milanic and Bernard Ries and Alexandru I. Tomescu}, editor = {Mihai Pop and H{\'{e}}l{\`{e}}ne Touzet}, title = {Finding a Perfect Phylogeny from Mixed Tumor Samples}, booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI} 2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9289}, pages = {80--92}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-662-48221-6\_6}, doi = {10.1007/978-3-662-48221-6\_6}, timestamp = {Sat, 16 Sep 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/wabi/HujdurovicKMRT15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/wabi/LafondE15, author = {Manuel Lafond and Nadia El{-}Mabrouk}, editor = {Mihai Pop and H{\'{e}}l{\`{e}}ne Touzet}, title = {Orthology Relation and Gene Tree Correction: Complexity Results}, booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI} 2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9289}, pages = {66--79}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-662-48221-6\_5}, doi = {10.1007/978-3-662-48221-6\_5}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/wabi/LafondE15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/wabi/MargalitBH15, author = {Yaron Margalit and Yael Baran and Eran Halperin}, editor = {Mihai Pop and H{\'{e}}l{\`{e}}ne Touzet}, title = {Multiple-Ancestor Localization for Recently Admixed Individuals}, booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI} 2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9289}, pages = {121--135}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-662-48221-6\_9}, doi = {10.1007/978-3-662-48221-6\_9}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/wabi/MargalitBH15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/wabi/MiclotteHDAF15, author = {Giles Miclotte and Mahdi Heydari and Piet Demeester and Pieter Audenaert and Jan Fostier}, editor = {Mihai Pop and H{\'{e}}l{\`{e}}ne Touzet}, title = {Jabba: Hybrid Error Correction for Long Sequencing Reads Using Maximal Exact Matches}, booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI} 2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9289}, pages = {175--188}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-662-48221-6\_13}, doi = {10.1007/978-3-662-48221-6\_13}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/wabi/MiclotteHDAF15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/wabi/OrensteinB15, author = {Yaron Orenstein and Bonnie Berger}, editor = {Mihai Pop and H{\'{e}}l{\`{e}}ne Touzet}, title = {Efficient Design of Compact Unstructured {RNA} Libraries Covering All k-mers}, booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI} 2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9289}, pages = {308--325}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-662-48221-6\_23}, doi = {10.1007/978-3-662-48221-6\_23}, timestamp = {Fri, 02 Nov 2018 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/wabi/OrensteinB15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/wabi/OunitL15, author = {Rachid Ounit and Stefano Lonardi}, editor = {Mihai Pop and H{\'{e}}l{\`{e}}ne Touzet}, title = {Higher Classification Accuracy of Short Metagenomic Reads by Discriminative Spaced k-mers}, booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI} 2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9289}, pages = {286--295}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-662-48221-6\_21}, doi = {10.1007/978-3-662-48221-6\_21}, timestamp = {Sat, 05 Sep 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/wabi/OunitL15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/wabi/Pizzi15, author = {Cinzia Pizzi}, editor = {Mihai Pop and H{\'{e}}l{\`{e}}ne Touzet}, title = {A Filtering Approach for Alignment-Free Biosequences Comparison with Mismatches}, booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI} 2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9289}, pages = {231--242}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-662-48221-6\_17}, doi = {10.1007/978-3-662-48221-6\_17}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/wabi/Pizzi15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/wabi/SeferK15, author = {Emre Sefer and Carl Kingsford}, editor = {Mihai Pop and H{\'{e}}l{\`{e}}ne Touzet}, title = {Semi-nonparametric Modeling of Topological Domain Formation from Epigenetic Data}, booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI} 2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9289}, pages = {148--161}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-662-48221-6\_11}, doi = {10.1007/978-3-662-48221-6\_11}, timestamp = {Sun, 25 Oct 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/wabi/SeferK15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/wabi/SichenZLZPCAMS15, author = {Zhong Sichen and Lu Zhao and Yan Liang and Mohammadzaman Zamani and Rob Patro and Rezaul Chowdhury and Esther M. Arkin and Joseph S. B. Mitchell and Steven Skiena}, editor = {Mihai Pop and H{\'{e}}l{\`{e}}ne Touzet}, title = {Optimizing Read Reversals for Sequence Compression - (Extended Abstract)}, booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI} 2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9289}, pages = {189--202}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-662-48221-6\_14}, doi = {10.1007/978-3-662-48221-6\_14}, timestamp = {Tue, 03 Nov 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/wabi/SichenZLZPCAMS15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/wabi/SilvaDZS15, author = {Poly H. da Silva and Simone Dantas and Chunfang Zheng and David Sankoff}, editor = {Mihai Pop and H{\'{e}}l{\`{e}}ne Touzet}, title = {Graph-Theoretic Modelling of the Domain Chaining Problem}, booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI} 2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9289}, pages = {296--307}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-662-48221-6\_22}, doi = {10.1007/978-3-662-48221-6\_22}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/wabi/SilvaDZS15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/wabi/SmolyCSLZ15, author = {Ilan Y. Smoly and Amir Carmel and Yonat Shemer{-}Avni and Esti Yeger Lotem and Michal Ziv{-}Ukelson}, editor = {Mihai Pop and H{\'{e}}l{\`{e}}ne Touzet}, title = {Algorithms for Regular Tree Grammar Network Search and Their Application to Mining Human-Viral Infection Patterns}, booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI} 2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9289}, pages = {53--65}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-662-48221-6\_4}, doi = {10.1007/978-3-662-48221-6\_4}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/wabi/SmolyCSLZ15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/wabi/SunCTM15, author = {Yihan Sun and Joseph Crawford and Jie Tang and Tijana Milenkovic}, editor = {Mihai Pop and H{\'{e}}l{\`{e}}ne Touzet}, title = {Simultaneous Optimization of both Node and Edge Conservation in Network Alignment via {WAVE}}, booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI} 2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9289}, pages = {16--39}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-662-48221-6\_2}, doi = {10.1007/978-3-662-48221-6\_2}, timestamp = {Fri, 14 Sep 2018 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/wabi/SunCTM15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/wabi/SwensonB15, author = {Krister M. Swenson and Mathieu Blanchette}, editor = {Mihai Pop and H{\'{e}}l{\`{e}}ne Touzet}, title = {Models and Algorithms for Genome Rearrangement with Positional Constraints}, booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI} 2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9289}, pages = {243--256}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-662-48221-6\_18}, doi = {10.1007/978-3-662-48221-6\_18}, timestamp = {Thu, 25 May 2017 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/wabi/SwensonB15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/wabi/WillJ15, author = {Sebastian Will and Hosna Jabbari}, editor = {Mihai Pop and H{\'{e}}l{\`{e}}ne Touzet}, title = {Sparse {RNA} Folding Revisited: Space-Efficient Minimum Free Energy Prediction}, booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI} 2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9289}, pages = {257--270}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-662-48221-6\_19}, doi = {10.1007/978-3-662-48221-6\_19}, timestamp = {Mon, 01 May 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/wabi/WillJ15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/wabi/ZhouLRHT15, author = {Jun Zhou and Yu Lin and Vaibhav Rajan and William Hoskins and Jijun Tang}, editor = {Mihai Pop and H{\'{e}}l{\`{e}}ne Touzet}, title = {Maximum Parsimony Analysis of Gene Copy Number Changes}, booktitle = {Algorithms in Bioinformatics - 15th International Workshop, {WABI} 2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9289}, pages = {108--120}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-662-48221-6\_8}, doi = {10.1007/978-3-662-48221-6\_8}, timestamp = {Tue, 31 Aug 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/wabi/ZhouLRHT15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@proceedings{DBLP:conf/wabi/2015, editor = {Mihai Pop and H{\'{e}}l{\`{e}}ne Touzet}, title = {Algorithms in Bioinformatics - 15th International Workshop, {WABI} 2015, Atlanta, GA, USA, September 10-12, 2015, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {9289}, publisher = {Springer}, year = {2015}, url = {https://doi.org/10.1007/978-3-662-48221-6}, doi = {10.1007/978-3-662-48221-6}, isbn = {978-3-662-48220-9}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/wabi/2015.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
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