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@inproceedings{DBLP:conf/bcb/0002XM24,
author = {Jiaqi Wang and
Houping Xiao and
Fenglong Ma},
title = {Asymmetric Mutual Learning for Decentralized Federated Medical Imaging},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {25:1--25:9},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701344},
doi = {10.1145/3698587.3701344},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/0002XM24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/0003LLLLW24,
author = {Xiao Song and
Jiafan Liu and
Yan Liu and
Yun Li and
Wenbin Lei and
Ruxin Wang},
title = {Rethinking Radiology Report Generation via Causal Inspired Counterfactual
Augmentation},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {5:1--5:10},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701353},
doi = {10.1145/3698587.3701353},
timestamp = {Tue, 17 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/0003LLLLW24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/0003LW024,
author = {Yuchen Zhang and
Xiujuan Lei and
Zhengfeng Wang and
Yi Pan},
title = {{ICDFGF:} Identification of potential circRNA-disease associations
based on feature graph factorization},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {9:1--9:10},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701365},
doi = {10.1145/3698587.3701365},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/0003LW024.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/0006SATPSG0Y24,
author = {Mahmudul Hasan and
Ariadna Kim Silva and
Shahira Abousamra and
Shao{-}Jun Tang and
Prateek Prasanna and
Joel H. Saltz and
Kevin Gardner and
Chao Chen and
Alisa Yurovsky},
title = {New Spatial Phenotypes from Imaging Uncover Survival Differences for
Breast Cancer Patients},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {17:1--17:12},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701333},
doi = {10.1145/3698587.3701333},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/0006SATPSG0Y24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/0015WM024,
author = {Lin Zhang and
Feng Wang and
Jiani Ma and
Hui Liu},
title = {scDBImpute: Dual-branch imputation for single-cell RNA-seq data dropouts},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {89:1},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701442},
doi = {10.1145/3698587.3701442},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/0015WM024.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AgapitoCLZ24,
author = {Giuseppe Agapito and
Mario Cannataro and
Wes J. Lloyd and
Chiara Zucco},
title = {13th Workshop on Parallel and AI-based Bioinformatics and Biomedicine
(ParBio): Editorial},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {95:1},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701527},
doi = {10.1145/3698587.3701527},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/AgapitoCLZ24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AlmutairiAWCAAL24,
author = {Mariam Almutairi and
Lulwah Alkulaib and
Shengkun Wang and
Zhiqian Chen and
Youssif ALMutairi and
Thamer M. Alenazi and
Kurt Luther and
Chang{-}Tien Lu},
title = {FHIRViz: Multi-Agent Platform for {FHIR} Visualization to Advance
Healthcare Analytics},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {38:1--38:7},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701392},
doi = {10.1145/3698587.3701392},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/AlmutairiAWCAAL24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Annan0Y0NQ24,
author = {Richard Annan and
Hong Qin and
Xiaohong Yuan and
Kaushik Roy and
Robert H. Newman and
Letu Qingge},
title = {Efficient Federated Learning with Multi-Teacher Knowledge Distillation
for {COVID-19} Detection},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {56:1--56:6},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701396},
doi = {10.1145/3698587.3701396},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/Annan0Y0NQ24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BalchD24,
author = {Andrew Balch and
Afsaneh Doryab},
title = {Towards Smartphone-Based Monitoring of Micronutrient Status},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {90:1},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701418},
doi = {10.1145/3698587.3701418},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/BalchD24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BianZZZZ24,
author = {Junyi Bian and
Jiaxuan Zheng and
Yuyi Zhang and
Hong Zhou and
Shanfeng Zhu},
title = {One-shot Biomedical Named Entity Recognition via Knowledge-Inspired
Large Language Model},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {26:1--26:10},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701356},
doi = {10.1145/3698587.3701356},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/BianZZZZ24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BuddhacharyaLFR24,
author = {Sangam Buddhacharya and
No{\"{e}}l Lefevre and
Elain S. Fu and
Stephen A. Ramsey},
title = {Evaluation of multi-feature machine-learning models for analyzing
electrochemical signals for drug monitoring},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {55:1--55:9},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701387},
doi = {10.1145/3698587.3701387},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/BuddhacharyaLFR24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChenTFY24,
author = {Fu Chen and
Leqi Tian and
Teng Fei and
Tianwei Yu},
title = {Fast-scBatch: Batch Effect Correction Using Neural Network-Driven
Distance Matrix Adjustment},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {66:1--66:6},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701383},
doi = {10.1145/3698587.3701383},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ChenTFY24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChenWL24,
author = {Bolin Chen and
Zhengyu Wang and
Ziyuan Li},
title = {{MCWCM:} Multi-Criteria Ranking and Weighted Control Model for Identifying
Key Drivers in cancer},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {60:1--60:6},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701529},
doi = {10.1145/3698587.3701529},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ChenWL24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChenWUL24,
author = {Rongqin Chen and
Dan Wu and
Leong Hou U and
Ye Li},
title = {{SVMPT:} {A} Hybrid Approach to Sparse and Irregular Clinical Data
Learning with Selective Variable-wise Message Passing and Transformer},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {23:1--23:8},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701350},
doi = {10.1145/3698587.3701350},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ChenWUL24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChenZSZLY24,
author = {Jianing Chen and
Yuansong Zeng and
Ningyuan Shangguan and
Wenhao Zhou and
Wenbing Li and
Yuedong Yang},
title = {Graph learning of disentangled representation for accurately aligning
multiple spatial slices},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {59:1--59:8},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701381},
doi = {10.1145/3698587.3701381},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ChenZSZLY24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChuWP24,
author = {Lei Chu and
Hongyan Wu and
Yi Pan},
title = {ChatASD: {A} Dialogue Framework for LLMs Enhanced by Autism Knowledge
Graph Retrieval},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {36:1--36:8},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701538},
doi = {10.1145/3698587.3701538},
timestamp = {Mon, 23 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ChuWP24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Cui24,
author = {Xuefeng Cui},
title = {Cutting-Edge Algorithms in Genomics: From Theory to Practice},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {96:1},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701484},
doi = {10.1145/3698587.3701484},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/Cui24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/CuiCJZ0024,
author = {Mingzhe Cui and
Tao Chen and
Yang Jiao and
Qian Zheng and
Yi Pan and
Lei Xie},
title = {PMSA-Net: {A} parallel multi-scale attention network for {MI-BCI}
classification},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {54:1--54:6},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701382},
doi = {10.1145/3698587.3701382},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/CuiCJZ0024.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/DangGMZNGH24,
author = {Thao M. Dang and
Yuzhi Guo and
Hehuan Ma and
Qifeng Zhou and
Saiyang Na and
Jean Gao and
Junzhou Huang},
title = {{MFMF:} Multiple Foundation Model Fusion Networks for Whole Slide
Image Classification},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {64:1--64:8},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701372},
doi = {10.1145/3698587.3701372},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/DangGMZNGH24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Das0X24,
author = {Manas Jyoti Das and
Praveen Rao and
Lisong Xu},
title = {Impact of the Networking Infrastructure on the Performance of Variant
Calling on Human Genomes in Commodity Clusters},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {1:1--1:11},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701354},
doi = {10.1145/3698587.3701354},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/Das0X24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/DengHXLCXXWS24,
author = {Tao Deng and
Mengqian Huang and
Kaichen Xu and
Yan Lu and
Siyu Chen and
Yucheng Xu and
Nina Xie and
Hao Wu and
Xiaobo Sun},
title = {{MIXER:} Identifying Co-expressed Genes in Multimodal Transcriptomic
Sequencing Data},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {35:1},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701469},
doi = {10.1145/3698587.3701469},
timestamp = {Mon, 23 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/DengHXLCXXWS24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Ding0GVVW24,
author = {Yulian Ding and
Yi Pan and
Ronald C. Geyer and
Franco J. Vizeacoumar and
Frederick S. Vizeacoumar and
Fang{-}Xiang Wu},
title = {Deciphering Bladder Cancer-Related circRNA Biomarkers: An Ensemble
Model Integrating Deep Learning and Statistics for circRNA Analysis},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {2:1--2:10},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701465},
doi = {10.1145/3698587.3701465},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/Ding0GVVW24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/DongLSSN24,
author = {Juechu Dong and
Xueshen Liu and
Harisankar Sadasivan and
Sriranjani Sitaraman and
Satish Narayanasamy},
title = {mm2-gb: {GPU} Accelerated Minimap2 for Long Read {DNA} Mapping},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {24:1--24:9},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701366},
doi = {10.1145/3698587.3701366},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/DongLSSN24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/EmonDT024,
author = {Muhit Islam Emon and
Badhan Das and
Ashrith Reddy Thukkaraju and
Liqing Zhang},
title = {DeePSP-GIN: identification and classification of phage structural
proteins using predicted protein structure, pretrained protein language
model, and graph isomorphism network},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {42:1--42:6},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701371},
doi = {10.1145/3698587.3701371},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/EmonDT024.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/FangZMNZ024,
author = {Senbiao Fang and
Huimin Zhu and
Yongfan Ming and
Kunying Niu and
Baoying Zhao and
Min Li},
title = {{RBVS:} Database of the Receptor-Based Virtual Screening},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {4:1--4:9},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701518},
doi = {10.1145/3698587.3701518},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/FangZMNZ024.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/FengSLY024,
author = {Shuo Feng and
Zhe Sun and
Runzhi Li and
Siyu Yan and
Lihong Ma},
title = {Improved genetic algorithm for readmission risk index optimization},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {84:1},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701433},
doi = {10.1145/3698587.3701433},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/FengSLY024.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/FrenselAH24,
author = {Mees Frensel and
Zaid Al{-}Ars and
H. Peter Hofstee},
title = {Learning Structured Sparsity for Efficient Nanopore {DNA} Basecalling
Using Delayed Masking},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {12:1--12:9},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701357},
doi = {10.1145/3698587.3701357},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/FrenselAH24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GalhotraDSWCZ24,
author = {Yashaswi Galhotra and
Ying Ding and
Li Shen and
Huanmei Wu and
Tianlong Chen and
Kaixiong Zhou},
title = {Towards Instructing Disease-Drug Link Prediction with Social Determinants
of Health},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {41:1--41:6},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701402},
doi = {10.1145/3698587.3701402},
timestamp = {Mon, 23 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/GalhotraDSWCZ24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GaoHLZ24,
author = {Qi Gao and
Guosheng Han and
Jialin Li and
Li Zeng},
title = {{GMF-MGCN-LDA:} Prediction of IncRNA-disease association based on
novel generalized matrix factorization and graph neural networks},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {28:1--28:10},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701467},
doi = {10.1145/3698587.3701467},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/GaoHLZ24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GeSXR24,
author = {Shuang Ge and
Shuqing Sun and
Huan Xu and
Zhixiang Ren},
title = {Distilling Multi-Modal Genomic Knowledge for Drug Response Prediction},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {81:1},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701430},
doi = {10.1145/3698587.3701430},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/GeSXR24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Gong24,
author = {Yuanhao Gong},
title = {A High Performance Parametric Model for 3D Gingiva-Tooth Boundary
via Generalized Cylinders},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {91:1},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701488},
doi = {10.1145/3698587.3701488},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/Gong24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GongWTGX24,
author = {Zhengze Gong and
Wenhui Wang and
Xiaocong Tan and
Mengkun Gan and
Weijie Xie},
title = {EpiUNet: Stain-Style Transfer Model for Histology Image Based on Generative
Adversarial Network},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {44:1--44:6},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701520},
doi = {10.1145/3698587.3701520},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/GongWTGX24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GuC24,
author = {James Gu and
Jake Y. Chen},
title = {{MLPA:} {A} Multi-scale Digital Twin Framework for Personalized Cancer
Simulation and Treatment Optimization},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {76:1},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701425},
doi = {10.1145/3698587.3701425},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/GuC24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HamzeheiRKON24,
author = {Sahand Hamzehei and
Gianna Raimondi and
Mostafa Karami and
Linnaea Ostroff and
Sheida Nabavi},
title = {{CAPTURE:} {A} Clustered Adaptive Patchwork Technique for Unified
Registration Enhancement in Biological Imaging},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {62:1--62:6},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701369},
doi = {10.1145/3698587.3701369},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/HamzeheiRKON24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HashimotoS24,
author = {Kohei Hashimoto and
Kana Shimizu},
title = {Enhancing Privacy Protection for Human Genome Synthesis Using Gradient
Clipping},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {37:1--37:6},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701391},
doi = {10.1145/3698587.3701391},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/HashimotoS24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HearneRDBR24,
author = {Gavin L. A. Hearne and
Mohammad S. Refahi and
Haozhe Neil Duan and
James R. Brown and
Gail L. Rosen},
title = {Normalized Compression Distance for {DNA} Classification},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {93:1},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701490},
doi = {10.1145/3698587.3701490},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/HearneRDBR24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HornbackIJSAW24,
author = {Andrew Hornback and
Monica Isgut and
Anirudh Jaishankar and
Harinishree Sathu and
Pavithra Avula and
May D. Wang},
title = {Uncovering Key Features of Individuals Who Benefit from Polygenic
Risk Scores in Prostate Cancer Prediction},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {47:1--47:6},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701380},
doi = {10.1145/3698587.3701380},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/HornbackIJSAW24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HuX0024,
author = {Kang Hu and
Minghua Xu and
Xin Gao and
Jianxin Wang},
title = {NeuralTE: an accurate approach for Transposable Element superfamily
classification with multi-feature fusion},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {33:1--33:10},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701346},
doi = {10.1145/3698587.3701346},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/HuX0024.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HuangL24,
author = {Michael Huang and
Yue Li},
title = {scMoE: single-cell mixture of experts for learning hierarchical, cell-type-specific,
and interpretable representations from heterogeneous scRNA-seq data},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {57:1--57:8},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701374},
doi = {10.1145/3698587.3701374},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/HuangL24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HuangWCDY0ZLHH24,
author = {Yixian Huang and
Huacong Wu and
Ying Cai and
Danhong Dong and
Sicong Yu and
Yigang Chen and
Zihao Zhu and
Yang{-}Chi{-}Dung Lin and
Hsien{-}Da Huang and
Hsi{-}Yuan Huang},
title = {DeepDrugmiR: a two-stage deep learning method for inferring small
molecules' regulatory effects on microRNA expression},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {10:1--10:10},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701351},
doi = {10.1145/3698587.3701351},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/HuangWCDY0ZLHH24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/JaiswalLBTZAS24,
author = {Sugam Jaiswal and
Joyce Lee and
Joe Berria and
Raviteja Tanikella and
Annuska Zolyomi and
Muhammad Aurangzeb Ahmad and
Dong Si},
title = {Building Personality-Adaptive Conversational {AI} for Mental Health
Therapy},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {92:1},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701489},
doi = {10.1145/3698587.3701489},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/JaiswalLBTZAS24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/JiangDW00024,
author = {Zekun Jiang and
Wei Dai and
Qu Wei and
Ziyuan Qin and
Kang Li and
Le Zhang},
title = {{EEG-DIF:} Early Warning of Epileptic Seizures through Generative
Diffusion Model-based Multi-channel {EEG} Signals Forecasting},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {71:1},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701473},
doi = {10.1145/3698587.3701473},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/JiangDW00024.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/JiangGMNASHGWH24,
author = {Feng Jiang and
Yuzhi Guo and
Hehuan Ma and
Saiyang Na and
Weizhi An and
Bing Song and
Yi Han and
Jean Gao and
Tao Wang and
Junzhou Huang},
title = {AlphaEpi: Enhancing {B} Cell Epitope Prediction with AlphaFold 3},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {67:1--67:8},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701389},
doi = {10.1145/3698587.3701389},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/JiangGMNASHGWH24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KaramiLWHN24,
author = {Mostafa Karami and
Bingjun Li and
Samson Weiner and
Sahand Hamzehei and
Sheida Nabavi},
title = {{DCCNV:} Enhanced {CNV} Detection in Single-Cell Sequencing Using
Diffusion Process and Contrastive Learning},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {48:1--48:6},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701395},
doi = {10.1145/3698587.3701395},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/KaramiLWHN24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KhatibRMK24,
author = {Tamim Khatib and
Oscar Diaz de la Rua and
Kawthar Moria and
Tamer Kahveci},
title = {{DANTE:} Determining Adaptation trajectories in biological Networks
Through Evolutionary mapping},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {52:1--52:6},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701499},
doi = {10.1145/3698587.3701499},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/KhatibRMK24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KongLW24,
author = {Weimiao Kong and
Yuqi Lin and
Yejun Wang},
title = {{PCMA:} {A} New Mediation Analysis Method Effectively Identifies Relevant
Pathways Connecting Microbiota and Diseases},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {79:1},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701428},
doi = {10.1145/3698587.3701428},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/KongLW24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LanCLCC024,
author = {Wei Lan and
Wenyi Chen and
Chunling Li and
Qingfeng Chen and
Yi{-}Ping Phoebe Chen and
Yi Pan},
title = {{GCLNSTDA:} Predicting tsRNA-Disease Association Based on Contrastive
Learning and Negative Sampling},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {8:1--8:7},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701466},
doi = {10.1145/3698587.3701466},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/LanCLCC024.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiHL24,
author = {Zongxuan Li and
Wenkui Huang and
Hong{-}Dong Li},
title = {MVFormer: Predicting the pathogenicity of missense variants using
gated transformers},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {63:1--63:6},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701379},
doi = {10.1145/3698587.3701379},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/LiHL24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiS0CY024,
author = {Runzhi Li and
Zhe Sun and
Jing Wang and
Gang Chen and
Siyu Yan and
Lihong Ma},
title = {Static and multivariate-temporal attentive fusion transformer for
readmission risk prediction of {ICU} patients},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {86:1},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701435},
doi = {10.1145/3698587.3701435},
timestamp = {Mon, 23 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/LiS0CY024.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiSFLML24,
author = {Xueliang Li and
Bihan Shen and
Fangyoumin Feng and
Kunshi Li and
Liangxiao Ma and
Hong Li},
title = {Dual-view jointly learning improves personalized drug synergy prediction},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {72:1},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701408},
doi = {10.1145/3698587.3701408},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/LiSFLML24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiXCYWZ24,
author = {Zeming Li and
Yu Xu and
Debajyoti Chowdhury and
Hip Fung Yip and
Chonghao Wang and
Lu Zhang},
title = {Med-PRSIMD: Enhanced Complex Disease Risk Prediction through Integrative
Analysis of Multi-Type Data and Medical History Records},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {97:1},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701485},
doi = {10.1145/3698587.3701485},
timestamp = {Mon, 23 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/LiXCYWZ24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LinLZZ24,
author = {Yusen Lin and
Feiyan Lin and
Yongjun Zhang and
Jiajian Zhou},
title = {PathoEye: a novel deep learning framework for histopathological image
analysis of skin tissue},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {46:1--46:6},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701553},
doi = {10.1145/3698587.3701553},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/LinLZZ24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiuC0PL0M024,
author = {Zengding Liu and
Chen Chen and
Jiannong Cao and
Minglei Pan and
Jikui Liu and
Nan Li and
Fen Miao and
Ye Li},
title = {Large Language Models for Cuffless Blood Pressure Measurement From
Wearable Biosignals},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {27:1--27:11},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701447},
doi = {10.1145/3698587.3701447},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/LiuC0PL0M024.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiuLWWM24,
author = {Zhendong Liu and
Jun Liu and
Dongqing Wei and
Yanjie Wei and
Rongjun Man},
title = {The Algorithms of Predicting {DNA} Binding Site with Combined Feature
Encoding and Optimum Decision},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {39:1--39:8},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701511},
doi = {10.1145/3698587.3701511},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/LiuLWWM24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiuTR24,
author = {Pengfei Liu and
Jun Tao and
Zhixiang Ren},
title = {Dynamic Knowledge-Prior for Few-Shot Drug-Drug Interaction Events
Prediction},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {82:1},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701431},
doi = {10.1145/3698587.3701431},
timestamp = {Mon, 23 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/LiuTR24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiuWYC24,
author = {Zhangdaihong Liu and
Xuan Wu and
Yang Yang and
David A. Clifton},
title = {A Comparison of Representation Learning Methods for Medical Concepts
in {EHR} Databases},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {94:1},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701491},
doi = {10.1145/3698587.3701491},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/LiuWYC24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiuZCXZSLY24,
author = {Jiang Liu and
Chan Zhou and
Yuwen Chen and
Yihao Xie and
Kunhua Zhong and
Qilong Sun and
Yujie Li and
Bin Yi},
title = {gPSRM: {A} generative propensity score-based replay memory for deep
reinforcement learnings},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {45:1--45:8},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701524},
doi = {10.1145/3698587.3701524},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/LiuZCXZSLY24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MaHPWW24,
author = {Ruimin Ma and
Ying Huang and
Yi Pan and
Yanlin Wang and
Yanjie Wei},
title = {Meta-data Study in Autism Spectrum Disorder Classification Based on
Structural {MRI}},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {75:1},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701416},
doi = {10.1145/3698587.3701416},
timestamp = {Mon, 23 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/MaHPWW24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MaZZ024,
author = {Teng Ma and
Haochen Zhao and
Qichang Zhao and
Jianxin Wang},
title = {Cox-Path: Biological Pathway-Informed Graph Neural Network for Cancer
Survival Prediction},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {70:1--70:6},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701397},
doi = {10.1145/3698587.3701397},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/MaZZ024.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MadhobiLK24,
author = {Kaniz Fatema Madhobi and
Eric Lofgren and
Ananth Kalyanaraman},
title = {A Multi-task Learning Approach for Predicting Spatio-temporal Patient
Variables},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {15:1--15:10},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701340},
doi = {10.1145/3698587.3701340},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/MadhobiLK24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MuntoZPWX24,
author = {Wondimagegn Bekele Munto and
Mengying Zhou and
Yi Pan and
Yanjie Wei and
Wenhui Xi},
title = {Deep Learning for Autism Spectrum Disorder Identification Based on
Children's Facial Images: {A} Multi-Feature Fusion Perspective},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {74:1},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701415},
doi = {10.1145/3698587.3701415},
timestamp = {Mon, 23 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/MuntoZPWX24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/PatelCH024,
author = {Parth Patel and
Yu{-}Chiao Chiu and
Yufei Huang and
Jianqiu Zhang},
title = {MetaphorPrompt - An Analogical Reasoning Approach for Extracting Causal
Links from Biological Text},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {49:1--49:6},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701384},
doi = {10.1145/3698587.3701384},
timestamp = {Mon, 30 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/PatelCH024.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Pathak24,
author = {Rudransh Pathak},
title = {Comparative Analysis of Prominent {AI} Models for Enhanced Diabetes
Diagnosis {\&} Prediction},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {83:1},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701432},
doi = {10.1145/3698587.3701432},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/Pathak24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/PengHZYXZ24,
author = {Wei Peng and
Yueran Hu and
Zihan Zhao and
Jingwen Yan and
Hongwei Xia and
Xiaolei Zhu},
title = {iDNA-EBT: An ensemble model based on multi-scale secondary fine-tuned
{BERT}},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {51:1--51:6},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701378},
doi = {10.1145/3698587.3701378},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/PengHZYXZ24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/PengZLPGL24,
author = {Hui Peng and
Xiaocai Zhang and
Yuansheng Liu and
Yi Pan and
Wilson Wen Bin Goh and
Jinyan Li},
title = {Optimal protospacer sequences recommended by ensemble deep learning
for high-efficiency base editing},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {31:1--31:10},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701339},
doi = {10.1145/3698587.3701339},
timestamp = {Mon, 23 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/PengZLPGL24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/PhamSOH0RVSJRBL24,
author = {Thuong Le Hoai Pham and
Jillur Rahman Saurav and
Aisosa A. Omere and
Calvin J. Heyl and
Mohammad Sadegh Nasr and
Cody Tyler Reynolds and
Jai Prakash Yadav Veerla and
Helen H. Shang and
Justyn Jaworski and
Alison Ravenscraft and
Joseph Anthony Buonomo and
Jacob M. Luber},
title = {Peptide Sequencing Via Protein Language Models},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {40:1--40:8},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701385},
doi = {10.1145/3698587.3701385},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/PhamSOH0RVSJRBL24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/RongCQXGLX24,
author = {Ziqi Rong and
Jinpu Cai and
Jiahao Qiu and
Pengcheng Xu and
Lana X. Garmire and
Qiuyu Lian and
Hongyi Xin},
title = {{L2} Normalization and Geodesic Distance for Enhanced Information
Preservation in Visualizing High-dimensional Single-cell Sequencing
Data},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {30:1--30:11},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701361},
doi = {10.1145/3698587.3701361},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/RongCQXGLX24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Rutecka0P024,
author = {Natalia Rutecka and
Agnieszka Mykowiecka and
Jaroslaw Paszek and
Pawel G{\'{o}}recki},
title = {Robinson-Foulds distance between phylogenetic networks and gene trees},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {7:1--7:10},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701349},
doi = {10.1145/3698587.3701349},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/Rutecka0P024.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ShahD24,
author = {Aaditya Shah and
Sugyan Dixit},
title = {DynPred: {A} Multimodal Deep Learning Approach for Protein Dynamics
Prediction},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {80:1},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701429},
doi = {10.1145/3698587.3701429},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ShahD24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ShangYZZD24,
author = {Muheng Shang and
Yan Yang and
Jin Zhang and
Daoqiang Zhang and
Lei Du},
title = {A Co-contrastive Learning Method to Fuse Multi-modal Phenotypes and
Identify Genetic Risk Variations},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {68:1--68:6},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701403},
doi = {10.1145/3698587.3701403},
timestamp = {Mon, 23 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ShangYZZD24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ShiLPWWL24,
author = {Ying Shi and
Shifu Luo and
Yi Pan and
Hao Wu and
Wenjian Wang and
Jinyan Li},
title = {Spatiotemporal attention boosts calling of complicated variations
from long reads' alignment data},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {19:1--19:10},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701335},
doi = {10.1145/3698587.3701335},
timestamp = {Mon, 23 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ShiLPWWL24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Song0DW24,
author = {Dachuan Song and
Li Shen and
Duy Duong{-}Tran and
Xuan Wang},
title = {Causality-based Subject and Task Fingerprints using fMRI Time-series
Data},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {18:1--18:10},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701342},
doi = {10.1145/3698587.3701342},
timestamp = {Mon, 23 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/Song0DW24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/SongLXZBL24,
author = {Ziyang Song and
Qincheng Lu and
Hao Xu and
He Zhu and
David Buckeridge and
Yue Li},
title = {TimelyGPT: Extrapolatable Transformer Pre-training for Long-term Time-Series
Forecasting in Healthcare},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {16:1--16:10},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701364},
doi = {10.1145/3698587.3701364},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/SongLXZBL24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/SunDW24,
author = {Leting Sun and
Zhixuan Deng and
Yejun Wang},
title = {Operonome: the concept and application in bacterial systems biology},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {78:1},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701427},
doi = {10.1145/3698587.3701427},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/SunDW24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/TamoNHCSZIW24,
author = {J. Ben Tamo and
Micky C. Nnamdi and
Andrew Hornback and
Matthew Chen and
Wenqi Shi and
Yuanda Zhu and
Henry J. Iwinski and
May D. Wang},
title = {Heterogeneous Treatment Effects of Spinal Fusion Surgery for Adolescent
Idiopathic Scoliosis Patients},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {6:1--6:10},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701493},
doi = {10.1145/3698587.3701493},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/TamoNHCSZIW24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/TzionyMSEPO24,
author = {Ido Tziony and
Jonathan Mandl and
Kobi Shapira and
Eli Eisenberg and
Ely Porat and
Yaron Orenstein},
title = {FiSSC: Finding smallest sequence covers to sets of degenerate reads
with applications to {RNA} editing},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {13:1--13:10},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701363},
doi = {10.1145/3698587.3701363},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/TzionyMSEPO24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WangAPZW024,
author = {Jianing Wang and
Jin A and
Hanjun Pan and
Ruiqing Zheng and
Chaojin Wu and
Min Li},
title = {CellCom: {A} web server for prediction, visualization, and evaluation
of cell-cell communication mediated by ligand-receptor pairs},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {3:1--3:7},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701352},
doi = {10.1145/3698587.3701352},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/WangAPZW024.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WangCW24,
author = {Yiwei Wang and
Peijun Chen and
Yejun Wang},
title = {BactAG: a novel method resolving bacterial ancient genomes precisely
and automatically},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {77:1},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701426},
doi = {10.1145/3698587.3701426},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/WangCW24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WangW24,
author = {Yuran Wang and
Kai Wu},
title = {Revealing Multi-biological Subtypes of Schizophrenia through a Data-Driven
Clustering},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {73:1},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701414},
doi = {10.1145/3698587.3701414},
timestamp = {Mon, 23 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/WangW24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WangWSBL24,
author = {Ruohan Wang and
Zilong Wang and
Ziyang Song and
David Buckeridge and
Yue Li},
title = {MixEHR-Nest: Identifying Subphenotypes within Electronic Health Records
through Hierarchical Guided-Topic Modeling},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {53:1--53:8},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701368},
doi = {10.1145/3698587.3701368},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/WangWSBL24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WangZWZFL0024,
author = {Letian Wang and
Yanbing Zhu and
Xiaohua Wan and
Yiming Zhang and
Shuang Feng and
Chang Li and
Fa Zhang and
Bin Hu},
title = {Com-DNB: {A} novel method for identifying critical states of complex
biological processes and its parallelization},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {29:1--29:10},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701338},
doi = {10.1145/3698587.3701338},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/WangZWZFL0024.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WuGLCY24,
author = {Jiayang Wu and
Wensheng Gan and
Jinqi Lai and
Guoting Chen and
Philip S. Yu},
title = {Drug-gene Associations with Graph Learning},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {61:1--61:6},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701393},
doi = {10.1145/3698587.3701393},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/WuGLCY24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/XiaoFY024,
author = {Yutian Xiao and
Xiaomao Fan and
Chongguang Yang and
Yang Zhao},
title = {{MPDF-UNET:} Modality Priors and Dynamic Features Fusion U-Net for
Incomplete Multimodal Brain Tumor Segmentation},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {65:1--65:6},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701475},
doi = {10.1145/3698587.3701475},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/XiaoFY024.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/XuBH24,
author = {Baihui Xu and
Sourav S. Bhowmick and
Jiancheng Hu},
title = {{PANACEA:} Towards Influence-driven Profiling of Drug Target Combinations
in Cancer Signaling Networks},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {69:1--69:6},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701540},
doi = {10.1145/3698587.3701540},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/XuBH24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/XuLWDLWS24,
author = {Kaichen Xu and
Kainan Liu and
Linjie Wang and
Yueyang Ding and
Yan Lu and
Hao Wu and
Xiaobo Sun},
title = {Detecting and Subtyping Anomalous Single Cells with {M2ASDA}},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {34:1},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701347},
doi = {10.1145/3698587.3701347},
timestamp = {Mon, 23 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/XuLWDLWS24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/YangLLSJ24,
author = {Taolue Yang and
Youyuan Liu and
Chong Li and
Xinhua Mindy Shi and
Sian Jin},
title = {SeqBench: {A} Benchmark Suite for Lossless and Lossy Compression of
Sequence Data},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {58:1--58:7},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701386},
doi = {10.1145/3698587.3701386},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/YangLLSJ24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/YangW024,
author = {Chao Yang and
Jingjing Wang and
Lu Zhang},
title = {Integrated analysis of gut microbiome compositional and genomic alterations
reveals strain diversity and actionable biomarkers across multiple
colorectal cancer cohorts},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {88:1},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701420},
doi = {10.1145/3698587.3701420},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/YangW024.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/YuZDW0S24,
author = {Haoyang Yu and
Bei Zhu and
Bing{-}Xue Du and
Xue{-}Xin Wei and
Hui Yu and
Jian{-}Yu Shi},
title = {{DVL-CC:} {A} Novel Dual-View Learning Framework for Compound Cocrystal
Prediction Boosted by View Consistency and Complementarity},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {32:1--32:9},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701355},
doi = {10.1145/3698587.3701355},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/YuZDW0S24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/YueX0IXCF24,
author = {Ling Yue and
Sixue Xing and
Jonathan Li and
Md. Zabirul Islam and
Bolun Xia and
Jintai Chen and
Tianfan Fu},
title = {TrialDura: Hierarchical Attention Transformer for Interpretable Clinical
Trial Duration Prediction},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {85:1},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701434},
doi = {10.1145/3698587.3701434},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/YueX0IXCF24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/YueXCF24,
author = {Ling Yue and
Sixue Xing and
Jintai Chen and
Tianfan Fu},
title = {ClinicalAgent: Clinical Trial Multi-Agent System with Large Language
Model-based Reasoning},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {11:1--11:10},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701359},
doi = {10.1145/3698587.3701359},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/YueXCF24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/YueXCF24a,
author = {Ling Yue and
Sixue Xing and
Jintai Chen and
Tianfan Fu},
title = {TrialEnroll: Predicting Clinical Trial Enrollment Success with Deep
{\&} Cross Network and Large Language Models},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {43:1--43:9},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701375},
doi = {10.1145/3698587.3701375},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/YueXCF24a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhangHWHYS24,
author = {Chenyu Zhang and
Qingli Hu and
Honglin Wang and
Seung{-}Hyun Hong and
Riqiang Yan and
Dong{-}Guk Shin},
title = {Leveraging Mutual Information for Functional Annotation Analysis of
Microglia in Alzheimer's Disease},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {14:1--14:10},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701468},
doi = {10.1145/3698587.3701468},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ZhangHWHYS24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhangPZZH24,
author = {Zhongteng Zhang and
Qing Peng and
Liu Zhang and
Zihao Zhang and
Weihong Huang},
title = {STAPFormer: {A} New 3D Human Pose Estimation Framework in Sports and
Health},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {20:1--20:10},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701367},
doi = {10.1145/3698587.3701367},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ZhangPZZH24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhangZZCLWW24,
author = {Huiling Zhang and
Jingjing Zhang and
Ganzhang Zheng and
Xiaochuan Chen and
Zaoqing Liang and
Haiyan Wang and
Yanjie Wei},
title = {Missense Mutation Effect Prediction using Categorical Boosting Optimized
with Sparrow Search Algorithm},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {98:1},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701505},
doi = {10.1145/3698587.3701505},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ZhangZZCLWW24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhaoW24,
author = {Che Zhao and
Shunfang Wang},
title = {AttCON-Homo: Attention and PLMs-enhanced Neural Networks for Predicting
Inter-chain Contacts and Distances in Homo-oligomeric Protein Complexes},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {50:1--50:6},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701400},
doi = {10.1145/3698587.3701400},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ZhaoW24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhaoZZD24,
author = {Haochen Zhao and
Xiaoyu Zhang and
Qichang Zhao and
Guihua Duan},
title = {{ISGDRP:} a multi-modal learning method for drug response prediction},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {21:1--21:8},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701362},
doi = {10.1145/3698587.3701362},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ZhaoZZD24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhengXHCLWZ24,
author = {Jianqiang Zheng and
Ziqi Xu and
Junwen Huang and
Xiaochuan Chen and
Yuetong Li and
Yanjie Wei and
Huiling Zhang},
title = {{CCVAN:} {A} Conditional Molecular Generation Model based on conditional
{VAE} and Wasserstein {GAN}},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {87:1},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701439},
doi = {10.1145/3698587.3701439},
timestamp = {Mon, 30 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ZhengXHCLWZ24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhouZZD24,
author = {Ruikang Zhou and
Haochen Zhao and
Jian Zhong and
Guihua Duan},
title = {PepGPL: {A} Multi-Task Framework for Identifying Peptide-Protein Interactions
and Corresponding Binding Residues},
booktitle = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
pages = {22:1--22:9},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587.3701348},
doi = {10.1145/3698587.3701348},
timestamp = {Sun, 22 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ZhouZZD24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/bcb/2024,
title = {Proceedings of the 15th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2024, Shenzhen,
China, November 22-25, 2024},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3698587},
doi = {10.1145/3698587},
isbn = {979-8-4007-1302-6},
timestamp = {Tue, 17 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/2024.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/0010X023,
author = {Zifeng Wang and
Cao Xiao and
Jimeng Sun},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {{SPOT:} Sequential Predictive Modeling of Clinical Trial Outcome with
Meta-Learning},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {53:1--53:11},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613001},
doi = {10.1145/3584371.3613001},
timestamp = {Fri, 06 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/0010X023.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AbbasCS23,
author = {Usman L. Abbas and
Jin Chen and
Qing Shao},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Assessing Fairness of AlphaFold2 Prediction of Protein 3D Structures},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {98:1--98:10},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612943},
doi = {10.1145/3584371.3612943},
timestamp = {Fri, 17 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/AbbasCS23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Al-GhazawiPS23,
author = {Renad Al{-}Ghazawi and
Theodore J. Perkins and
Xiaojian Shao},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {A Model of Cell Population Dynamics in Skeletal Muscle Regeneration},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {57:1},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613066},
doi = {10.1145/3584371.3613066},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Al-GhazawiPS23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AlaminL23,
author = {Md Alamin and
Kevin J. Liu},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Phylogenetic Placement of Aligned Genomes and Metagenomes with Non-tree-like
Evolutionary Histories},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {45:1--45:10},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612981},
doi = {10.1145/3584371.3612981},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/AlaminL23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Alshammari0W23,
author = {Maytha Alshammari and
Jing He and
Willy Wriggers},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {AlphaFold2 Model Refinement Using Structure Decoys},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {108:1--108:7},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612952},
doi = {10.1145/3584371.3612952},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Alshammari0W23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AnjumCDAYWCZ0J23,
author = {Omer Anjum and
Luyao Chen and
Ryan Denlinger and
Ejaz Anam and
Dongsheng Yuan and
Connie Wooldridge and
Martin J. Citardi and
Jiajie Zhang and
Hua Xu and
Xiaoqian Jiang},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {FinFax: Fast Interpretation of Fax with {NLP}},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {73:1--73:2},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613019},
doi = {10.1145/3584371.3613019},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/AnjumCDAYWCZ0J23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AuslanderE23,
author = {Noam Auslander and
Abdurrahman Elbasir},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Identification of generalizable gene expression biomarkers associated
with drug Respose in cell Lines and patients},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {76:1},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613048},
doi = {10.1145/3584371.3613048},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/AuslanderE23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BabjacLE23,
author = {Ashley Nicole Babjac and
Zhixiu Lu and
Scott J. Emrich},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {CodonBERT: Using {BERT} for Sentiment Analysis to Better Predict Genes
with Low Expression},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {29:1--29:6},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613013},
doi = {10.1145/3584371.3613013},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/BabjacLE23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BalajiLNHKLGTT23,
author = {Advait Balaji and
Yunxi Liu and
Michael G. Nute and
Bingbing Hu and
Anthony D. Kappell and
Danielle S. Lesassier and
Gene D. Godbold and
Krista Ternus and
Todd J. Treangen},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {SeqScreen-Nano: a computational platform for streaming, in-field characterization
of microbial pathogens},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {17:1--17:10},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612960},
doi = {10.1145/3584371.3612960},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/BalajiLNHKLGTT23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BearBLW23,
author = {J. White Bear and
Gr{\'{e}}goire De Bisschop and
Eric L{\'{e}}cuyer and
J{\'{e}}r{\^{o}}me Waldisp{\"{u}}hl},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Localized, Non-parametric Detection of {RNA} Structural Modification
using Nanopore Basecalling},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {38:1--38:8},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612989},
doi = {10.1145/3584371.3612989},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/BearBLW23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Braun23,
author = {Edward L. Braun},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Phylogenomics using Compression Distances: Incorporating Rate Heterogeneity
and Amino Acid Properties},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {46:1--46:6},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612996},
doi = {10.1145/3584371.3612996},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Braun23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BuminSHK23,
author = {Aysegul Bumin and
Megan Shah and
Kejun Huang and
Tamer Kahveci},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Vulture: VULnerabilities in impuTing drUg REsistance},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {56:1--56:6},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612993},
doi = {10.1145/3584371.3612993},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/BuminSHK23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/CahoonG23,
author = {Jordan Li Cahoon and
Luis Antonio Garcia},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Continuous Stress Monitoring for Healthcare Workers: Evaluating Generalizability
Across Real-World Datasets},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {31:1--31:5},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612974},
doi = {10.1145/3584371.3612974},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/CahoonG23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/CaoIJPCK23,
author = {Xin Cao and
Mikhail Ignatov and
George Jones and
Sara N. Pollock and
Evangelos A. Coutsias and
Dima Kozakov},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Numerically stable algorithm for Inverse Kinematics of 6R problem
and its applications to macrocycles},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {84:1},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613040},
doi = {10.1145/3584371.3613040},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/CaoIJPCK23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Caoili23,
author = {Salvador Eugenio C. Caoili},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Capturing Solvent-System Effects in B-Cell Epitope Prediction with
the {HAPTIC3/HEPTAD2} User Toolkit {(HUT2)}},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {62:1},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613045},
doi = {10.1145/3584371.3613045},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Caoili23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChakravartyLL23,
author = {Sakshar Chakravarty and
Glennis Logsdon and
Stefano Lonardi},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {RAmbler: de novo genome assembly of complex repetitive regions},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {13:1},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612971},
doi = {10.1145/3584371.3612971},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ChakravartyLL23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChenL23,
author = {Yang Chen and
Elissa P. Lei},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Deciphering the contribution of 3D interactions between cis-regulatory
elements and promoters to regulate gene expression using graph neural
networks},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {67:1},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613033},
doi = {10.1145/3584371.3613033},
timestamp = {Thu, 23 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ChenL23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChenSLL23,
author = {Lei Chen and
Junhao Su and
Tak Wah Lam and
Ruibang Luo},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Exploring Pair-Aware Triangular Attention for Biomedical Relation
Extraction},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {35:1--35:5},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612994},
doi = {10.1145/3584371.3612994},
timestamp = {Fri, 17 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ChenSLL23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChenSZLL23,
author = {Lei Chen and
Junhao Su and
Zhenxian Zheng and
Tak Wah Lam and
Ruibang Luo},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Large-scale Dataset and Effective Model for Variant-Disease Associations
Extraction},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {37:1--37:6},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612995},
doi = {10.1145/3584371.3612995},
timestamp = {Fri, 17 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ChenSZLL23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChoiKKLS23,
author = {Ahyoung Choi and
No Soo Kim and
Aeyung Kim and
Haeseung Lee and
Hyunjin Shin},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Identification of therapeutic targets for muscle atrophy via analyzing
transcriptomic profiles with systems biology approaches},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {77:1},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613043},
doi = {10.1145/3584371.3613043},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ChoiKKLS23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChoudheryI23,
author = {Sanjeevani Choudhery and
Thomas R. Ioerger},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Dual {ICA} to extract interacting sets of genes and conditions from
transcriptomic data},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {8:1--8:13},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612968},
doi = {10.1145/3584371.3612968},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ChoudheryI23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChowdhuryCMDYZ23,
author = {Shaika Chowdhury and
Yongbin Chen and
Xiao Ma and
Qiying Dai and
Yue Yu and
Nansu Zong},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Evaluating Drug Effectiveness for Antihypertensives in Heart Failure
Prognosis: Leveraging Composite Clinical Endpoints and Biomarkers
from Electronic Health Records},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {34:1--34:6},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612977},
doi = {10.1145/3584371.3612977},
timestamp = {Wed, 08 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ChowdhuryCMDYZ23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/CiudadBT23,
author = {Elias A Ciudad and
Lori Boies and
Muskaan Tayal},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Understanding the Evolutionary Conservation of the Ilp1 gene across
Drosophila: Genomics Education Partnership},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {95:1},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613026},
doi = {10.1145/3584371.3613026},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/CiudadBT23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/CofflandCJH23,
author = {Sarah Coffland and
Katie Christensen and
Filip Jagodzinski and
Brian Hutchinson},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {RoseNet: Predicting Energy Metrics of Double InDel Mutants Using Deep
Learning},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {107:1--107:9},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612951},
doi = {10.1145/3584371.3612951},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/CofflandCJH23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/DokoL23,
author = {Rei Doko and
Kevin Liu},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Reconstructing Phylogenies Using Branch-Variable Substitution Models
and Unaligned Biomolecular Sequences: {A} Performance Study and New
Resampling Method},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {51:1--51:10},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613011},
doi = {10.1145/3584371.3613011},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/DokoL23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/FengYEHH023,
author = {Qizhang Feng and
Jiayi Yuan and
Forhan Bin Emdad and
Karim Hanna and
Xia Hu and
Zhe He},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Can Attention Be Used to Explain EHR-Based Mortality Prediction Tasks:
{A} Case Study on Hemorrhagic Stroke},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {26:1--26:6},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613002},
doi = {10.1145/3584371.3613002},
timestamp = {Sun, 28 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/FengYEHH023.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/FowlerKPA23,
author = {Zoe Fowler and
Kiran Premdat Kokilepersaud and
Mohit Prabhushankar and
Ghassan Alregib},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Clinical Trial Active Learning},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {6:1--6:10},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612961},
doi = {10.1145/3584371.3612961},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/FowlerKPA23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GadariBIJCSV23,
author = {Adarsh Gadari and
Sandeep Chandra Bollepalli and
Mohammed Nasar Ibrahim and
Jos{\'{e}}{-}Alain Sahel and
Jay Chhablani and
Shan Suthaharan and
Kiran Kumar Vupparaboina},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Robust Retinal Layer Segmentation Using {OCT} B-Scans: {A} Novel Approach
Based on Pix2Pix Generative Adversarial Network},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {52:1--52:6},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612979},
doi = {10.1145/3584371.3612979},
timestamp = {Wed, 20 Dec 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/GadariBIJCSV23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GadhiaSLBHNXKR23,
author = {Nandini Amit Gadhia and
Michalis Smyrnakis and
Po{-}Yu Liu and
Damer Blake and
Melanie Hay and
Anh Nguyen and
Dong Xia and
Ritesh Krishna and
Dominic Richards},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Formulating a method to analyse the differential expression of co-occurrence
networks for small-sampled microbiome data},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {9:1--9:6},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612969},
doi = {10.1145/3584371.3612969},
timestamp = {Fri, 17 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/GadhiaSLBHNXKR23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GargDR23,
author = {Ayush Garg and
Shyam Sundar Das and
Narayanan Ramamurthi},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {AutoML in Drug Discovery: Side-Effects Prediction Using AutoGluon
Framework and Its Applications in Drug Discovery},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {60:1},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613051},
doi = {10.1145/3584371.3613051},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/GargDR23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GargDR23a,
author = {Ayush Garg and
Shyam Sundar Das and
Narayanan Ramamurthi},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Drug Target Prioritization Based on Ligand Binding Pocket and Disease-Target
Association Scores},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {71:1},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613058},
doi = {10.1145/3584371.3613058},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/GargDR23a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GargNV23,
author = {Arnav Garg and
Pranav Narala and
Maruthi Vemula},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Doxorubicin Efficacy Prediction for Glioblastomas Using Deep Learning
and Differnetial Equations},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {70:1},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613031},
doi = {10.1145/3584371.3613031},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/GargNV23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GazeauN23,
author = {L{\'{e}}a Gazeau and
Hang Nguyen},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Automatically measuring dyspigmentation severity of the skin using
a convolutional neural network},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {59:1},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613046},
doi = {10.1145/3584371.3613046},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/GazeauN23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GoyalPCSAOMFPGM23,
author = {Abhay Goyal and
Nimay Parekh and
Lam Yin Cheung and
Koustuv Saha and
Frederick L. Altice and
Robin O'Hanlon and
Roger Ho Chun Man and
Chunki Fong and
Christian Poellabauer and
Honoria Guarino and
Pedro Mateu{-}Gelabert and
Navin Kumar},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Predicting Opioid Use Outcomes in Minoritized Communities},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {86:1--86:2},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613023},
doi = {10.1145/3584371.3613023},
timestamp = {Thu, 02 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/GoyalPCSAOMFPGM23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HamzeheiBRTON23,
author = {Sahand Hamzehei and
Jun Bai and
Gianna Raimondi and
Rebecca Tripp and
Linnaea Ostroff and
Sheida Nabavi},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {3D Biological/Biomedical Image Registration with enhanced Feature
Extraction and Outlier Detection},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {1:1--1:10},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612965},
doi = {10.1145/3584371.3612965},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/HamzeheiBRTON23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HasaniTTJ23,
author = {Moein Hasani and
Chantel N. Trost and
Nolen Timmerman and
Lingling Jin},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {AcrTransAct: Pre-trained Protein Transformer Models for the Detection
of Type {I} Anti-CRISPR Activities},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {22:1--22:6},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613007},
doi = {10.1145/3584371.3613007},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/HasaniTTJ23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HercegS23,
author = {Megan Herceg and
Amarda Shehu},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Structure- and Energy-based Analysis of Small Molecule Ligand Binding
to Steroid Nuclear Receptors},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {105:1--105:9},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612949},
doi = {10.1145/3584371.3612949},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/HercegS23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HirwayYTMIG23,
author = {Shreyas U. Hirway and
Xiang Yao and
Fetene B. Tekle and
Thomas De Marchin and
Onyi Irrechukwu and
Freddy Van Goethem},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Gene Regulatory Network Based Toxicity Classification and Prediction:
{A} {DILI} Case Study},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {74:1},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613041},
doi = {10.1145/3584371.3613041},
timestamp = {Sat, 13 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/HirwayYTMIG23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/JacksonL23,
author = {Felix Jackson and
Thomas Lukasiewicz},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Deconvolution of cell-free {DNA} in cancer liquid biopsy using a deep
AutoEncoder},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {32:1--32:6},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612976},
doi = {10.1145/3584371.3612976},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/JacksonL23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/JamilKG23,
author = {Hasan M. Jamil and
Stephen A. Krawetz and
Alexander Gow},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Leveraging Large Language Models for Automatic Hypotheses Testing
over Heterogeneous Biological Databases},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {80:1--80:2},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613022},
doi = {10.1145/3584371.3613022},
timestamp = {Wed, 22 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/JamilKG23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/JaswalRF23,
author = {Twinkle Jaswal and
Epaminondas Rosa Jr. and
Rosangela Follmann},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Temperature Effects on Neuronal Synchronization},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {94:1},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613037},
doi = {10.1145/3584371.3613037},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/JaswalRF23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/JhaF23,
author = {Sonal Jha and
Wu{-}chun Feng},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {{GRAPPEL:} {A} Graph-based Approach for Early Risk Assessment of Acute
Hypertension in Critical Care},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {36:1--36:6},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612978},
doi = {10.1145/3584371.3612978},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/JhaF23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/JiaPK23,
author = {Xinglin Jia and
An Phan and
Claus Kadelka},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Concise Ranked Functional Enrichment Analysis},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {64:1},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613044},
doi = {10.1145/3584371.3613044},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/JiaPK23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/JodhaMJSP23,
author = {Rajshree Jodha and
Priyanka Mishra and
J. Angel Arul Jothi and
Sameer Saifi and
Abhishek Purohit},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Performance Evaluation of Semantic Segmentation Models with and without
Attention for White Blood Cells Segmentation},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {43:1--43:4},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612975},
doi = {10.1145/3584371.3612975},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/JodhaMJSP23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KabirMS23,
author = {Anowarul Kabir and
Asher Moldwin and
Amarda Shehu},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {A Comparative Analysis of Transformer-based Protein Language Models
for Remote Homology Prediction},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {97:1--97:9},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612942},
doi = {10.1145/3584371.3612942},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/KabirMS23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KalbasiNA23,
author = {Reza Kalbasi and
David P. Nickerson and
Koray Atalag},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {PhysioMed: {A} Semantic Web based Framework for Linking Healthcare
Information with Computational Physiology Models},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {85:1},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613056},
doi = {10.1145/3584371.3613056},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/KalbasiNA23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KamelSQBSVMPB23,
author = {Mena Soliman Asaad Kamel and
Amrut Sarangi and
Cindy Qin and
Het Barot and
Pavel Senin and
Sergio Villordo and
Sunaal Mathew and
Albert Pla Planas and
Ziv Bar{-}Joseph},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Deep-Learning Based Cell Segmentation and Deconvolution in Spatial
Transcriptomics},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {68:1},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613050},
doi = {10.1145/3584371.3613050},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/KamelSQBSVMPB23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KarabulutV23,
author = {Mehmet Efruz Karabulut and
K. Vijay{-}Shanker},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Sectioning biomedical abstracts using pointer networks},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {16:1--16:9},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612959},
doi = {10.1145/3584371.3612959},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/KarabulutV23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KaturiRF23,
author = {Gangadhar Katuri and
Epaminondas Rosa Jr. and
Rosangela Follmann},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Phase Synchronization in Brain Collective Dynamics},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {44:1--44:7},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613012},
doi = {10.1145/3584371.3613012},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/KaturiRF23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Kinger23,
author = {Savik Kinger},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Quantifying Recombination Bias in Viral Evolution Using Persistent
Homology},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {50:1--50:6},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612992},
doi = {10.1145/3584371.3612992},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Kinger23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KogaM23,
author = {Tsukasa Koga and
Osamu Maruyama},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {{CBOEP:} Generating negative enhancer-promoter interactions to train
classifiers},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {27:1--27:6},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612997},
doi = {10.1145/3584371.3612997},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/KogaM23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Kromer-Edwards23,
author = {Cory Kromer{-}Edwards},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Optimizing K-Mer Fingerprint Generation for Machine Learning},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {101:1--101:5},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612946},
doi = {10.1145/3584371.3612946},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Kromer-Edwards23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Kromer-EdwardsO23,
author = {Cory Kromer{-}Edwards and
Suely Oliveira},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Compound {RNN} to predict MICs using K-Mer Fingerprints and Antibiotic
{SMILES}},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {30:1--30:5},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613003},
doi = {10.1145/3584371.3613003},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Kromer-EdwardsO23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LeK23,
author = {Nguyen{-}Quoc{-}Khanh Le and
Quang{-}Hien Kha},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {A Sequence-Based Prediction Model of Vesicular Transport Proteins
Using Ensemble Deep Learning},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {106:1--106:6},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612950},
doi = {10.1145/3584371.3612950},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/LeK23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiCK23,
author = {Mengzhen Li and
Mustafa Coskun and
Mehmet Koyut{\"{u}}rk},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Canonical Representation of Biological Networks Using Graph Convolution},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {5:1--5:9},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612963},
doi = {10.1145/3584371.3612963},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/LiCK23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiJ23,
author = {Changrui Li and
Filip Jagodzinski},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Identifying Impactful Pairs of Insertion Mutations in Proteins},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {99:1--99:8},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612944},
doi = {10.1145/3584371.3612944},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/LiJ23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiN23,
author = {Bingjun Li and
Sheida Nabavi},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Contrastive Learning in Single-cell Multiomics Clustering},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {65:1},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613010},
doi = {10.1145/3584371.3613010},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/LiN23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiS23,
author = {Xiang Li and
Mingfu Shao},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {On de novo Bridging Paired-end RNA-seq Data},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {41:1--41:5},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612987},
doi = {10.1145/3584371.3612987},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/LiS23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiW0L23,
author = {Rui Li and
Andrew Wen and
Jing Gao and
Hongfang Liu},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {{MLGAN:} a Meta-Learning based Generative Adversarial Network adapter
for rare disease differentiation tasks},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {11:1--11:10},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612967},
doi = {10.1145/3584371.3612967},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/LiW0L23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiuEHX023,
author = {Mengjing Liu and
Mohammed Elbadry and
Yindong Hua and
Zongxing Xie and
Fan Ye},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Proteus: Towards a Manageability-focused Home-based Health Monitoring
Infrastructure},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {49:1--49:6},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613006},
doi = {10.1145/3584371.3613006},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/LiuEHX023.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LukasD23,
author = {Brandon Edward Lukas and
Yang Dai},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {An Integrative Approach to Building Regulatory Potential-Weighted
Gene Regulatory Networks: {A} Leiomyoma Case Study},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {23:1--23:6},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612985},
doi = {10.1145/3584371.3612985},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/LukasD23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Ma0S23,
author = {Leran Ma and
Ke Chen and
Mingfu Shao},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {On the Maximal Independent Sets of \emph{k}-mers with the Edit Distance},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {42:1--42:6},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612982},
doi = {10.1145/3584371.3612982},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Ma0S23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MarshCC23,
author = {Alexis L. Marsh and
Myra B. Cohen and
Robert W. Cottingham},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {{CORE:} Comparable, Open, Reliable, Extensible Software: An Experience
Report of Four Flux Balance Analysis Tools},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {66:1},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613005},
doi = {10.1145/3584371.3613005},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/MarshCC23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MaxinGSMML23,
author = {Anthony James Maxin and
Bernice G. Gulek and
Rami Shaibani and
Alex Mariakakis and
Lynn B. McGrath and
Michael R. Levitt},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Smartphone-based Pupillometry for Diagnosis of Ischemic and Hemorrhagic
Stroke},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {92:1},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613049},
doi = {10.1145/3584371.3613049},
timestamp = {Thu, 10 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/MaxinGSMML23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/NampallyKPPL23,
author = {Arun Nampally and
Joseph Kim and
Eric Proffitt and
Eugene Palovcak and
Alix Lacoste},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Reference-Free Imputation of Targeted Next-Generation Sequence Datasets},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {90:1},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613047},
doi = {10.1145/3584371.3613047},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/NampallyKPPL23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/NguyenMS023,
author = {Thu Nguyen and
Yongcheng Mu and
Jiangwen Sun and
Jing He},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {An Approach to Developing Benchmark Datasets for Protein Secondary
Structure Segmentation from Cryo-EM Density Maps},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {102:1--102:8},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612947},
doi = {10.1145/3584371.3612947},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/NguyenMS023.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/NguyenO23,
author = {Quoc Nguyen and
Layla Oesper},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Generalized Matching Distance: Tumor Phylogeny Comparison Beyond the
Infinite Sites Assumption},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {10:1--10:9},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612970},
doi = {10.1145/3584371.3612970},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/NguyenO23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/NnamdiTSSMW23,
author = {Micky C. Nnamdi and
Junior Ben Tamo and
Sara Stackpole and
Wenqi Shi and
Benoit Marteau and
May Dongmei Wang},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Model Confidence Calibration for Reliable {COVID-19} Early Screening
via Audio Signal Analysis},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {39:1--39:6},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613015},
doi = {10.1145/3584371.3613015},
timestamp = {Tue, 17 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/NnamdiTSSMW23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Oduro-AfriyieJ23,
author = {Joel Oduro{-}Afriyie and
Hasan M. Jamil},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Enabling the Informed Patient Paradigm with Secure and Personalized
Medical Question Answering},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {33:1--33:6},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613016},
doi = {10.1145/3584371.3613016},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Oduro-AfriyieJ23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/PashaRKP23,
author = {Deepro Pasha and
Yohei Rosen and
Maxim Kuznetsov and
Benedict Paten},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Genetic Site-Aware Three-Dimensional Layout Algorithm for Variation
Graphs},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {75:1},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613053},
doi = {10.1145/3584371.3613053},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/PashaRKP23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/PrakashRPVVG23,
author = {Mukkamala Venkata Sai Prakash and
Siddartha Reddy and
Ganesh Parab and
Varun V and
Vishal Vaddina and
Saisubramaniam Gopalakrishnan},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Synergistic Fusion of Graph and Transformer Features for Enhanced
Molecular Property Prediction},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {93:1},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613014},
doi = {10.1145/3584371.3613014},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/PrakashRPVVG23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/QayyumQY23,
author = {Alif Bin Abdul Qayyum and
Xiaoning Qian and
Byung{-}Jun Yoon},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Enhancing Cryo-EM Particle Picking Through Consistency Model-based
Latent Space Denoiser},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {72:1},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613030},
doi = {10.1145/3584371.3613030},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/QayyumQY23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/QuintanaTK23,
author = {Felix Quintana and
Todd J. Treangen and
Lydia E. Kavraki},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Leveraging Large Language Models for Predicting Microbial Virulence
from Protein Structure and Sequence},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {103:1--103:6},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612953},
doi = {10.1145/3584371.3612953},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/QuintanaTK23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/RahimiMTSP23,
author = {Morteza Rahimi and
Zeina Al Masry and
John Michael Templeton and
Sandra L. Schneider and
Christian Poellabauer},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Beyond Motor Symptoms: Toward a Comprehensive Grading of Parkinson's
Disease Severity},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {24:1--24:6},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612988},
doi = {10.1145/3584371.3612988},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/RahimiMTSP23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/RanjanDR23,
author = {Pritish Ranjan and
Shyam Sundar Das and
Narayanan Ramamurthi},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Investigation of Drug Repurposing Opportunities Using Side-effects
data, Topic Modelling and Clustering Algorithms},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {79:1},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613052},
doi = {10.1145/3584371.3613052},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/RanjanDR23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/RashelbachRS23,
author = {Alon Rashelbach and
Ori Rottenstreich and
Mark Silberstein},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Nucleotide String Indexing using Range Matching},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {83:1--83:2},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613024},
doi = {10.1145/3584371.3613024},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/RashelbachRS23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/RoccoP23,
author = {Lorenzo Di Rocco and
Umberto Ferraro Petrillo},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {A Distributed Alignment-free Pipeline for Human SNPs Genotyping},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {20:1--20:8},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612990},
doi = {10.1145/3584371.3612990},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/RoccoP23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/SagarRSF23,
author = {Dikshant Sagar and
Ali Risheh and
Nida Sheikh and
Negin Forouzesh},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Physics-Guided Deep Generative Model For New Ligand Discovery},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {1--9},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613067},
doi = {10.1145/3584371.3613067},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/SagarRSF23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/SahaSPN23,
author = {Arpita Saha and
Maggie Samaan and
Bo Peng and
Xia Ning},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {A Multi-Layered {GRU} Model for {COVID-19} Patient Representation
and Phenotyping from Large-Scale {EHR} Data},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {21:1--21:6},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612986},
doi = {10.1145/3584371.3612986},
timestamp = {Wed, 10 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/SahaSPN23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/SahiLMDZ23,
author = {Niranjan Sahi and
Anda Liang and
Sean Mchale and
Wyn Van Devanter and
Peng Zhang},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Interoperable Healthcare with Blockchain: {A} Data Transfer Model},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {78:1},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613004},
doi = {10.1145/3584371.3613004},
timestamp = {Mon, 25 Dec 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/SahiLMDZ23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/SarkerZHZ23,
author = {Kowshika Sarker and
Ruoqing Zhu and
Hannah D. Holscher and
ChengXiang Zhai},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Augmenting nutritional metabolomics with a genome-scale metabolic
model for assessment of diet intake},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {4:1--4:10},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612958},
doi = {10.1145/3584371.3612958},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/SarkerZHZ23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Shan23,
author = {Mridula Shan},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Real-Time Monitoring of Health Security Attacks with R-based Data
Visualization Dashboard},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {89:1},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613035},
doi = {10.1145/3584371.3613035},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Shan23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ShiMGW23,
author = {Wenqi Shi and
Benoit Louis Marteau and
Felipe O. Giuste and
May Dongmei Wang},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Choice Over Effort: Mapping and Diagnosing Augmented Whole Slide Image
Datasets with Training Dynamics},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {28:1--28:6},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612980},
doi = {10.1145/3584371.3612980},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ShiMGW23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ShiZZIWW23,
author = {Wenqi Shi and
Yuchen Zhuang and
Yuanda Zhu and
Henry J. Iwinski and
J. Michael Wattenbarger and
May Dongmei Wang},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Retrieval-Augmented Large Language Models for Adolescent Idiopathic
Scoliosis Patients in Shared Decision-Making},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {14:1--14:10},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612956},
doi = {10.1145/3584371.3612956},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ShiZZIWW23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Strobl23,
author = {Eric V. Strobl},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Root Causal Inference from Single Cell {RNA} Sequencing with the Negative
Binomial},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {15:1--15:10},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612972},
doi = {10.1145/3584371.3612972},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Strobl23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/StubblefieldN23,
author = {Jonathan W. Stubblefield and
Trishna Niraula},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Using Large Language Models to Translate Machine Results to Human
Results},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {96:1},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613036},
doi = {10.1145/3584371.3613036},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/StubblefieldN23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/TamCGOODC23,
author = {Justin Z. Tam and
Alexandra Chua and
Adyn Gallagher and
Denice Omene and
Danielle Okun and
Dominic DiFranzo and
Brian Y. Chen},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {A Containerization Framework for Bioinformatics Software to Advance
Scalability, Portability, and Maintainability},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {104:1--104:5},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612948},
doi = {10.1145/3584371.3612948},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/TamCGOODC23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/TamoSZNIWW23,
author = {Junior Ben Tamo and
Wenqi Shi and
Yuanda Zhu and
Micky C. Nnamdi and
Henry J. Iwinski and
J. Michael Wattenbarger and
May Dongmei Wang},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Adolescent Idiopathic Scoliosis Patient Subphenotyping for Surgical
Planning and Improved Patient Outcomes},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {2:1--2:10},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612957},
doi = {10.1145/3584371.3612957},
timestamp = {Tue, 17 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/TamoSZNIWW23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/TangZSSY23,
author = {Zijia Tang and
Tonglin Zhang and
Qianqian Song and
Jing Su and
Baijian Yang},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {PINet: Privileged Information Improve the Interpretablity and generalization
of structural {MRI} in Alzheimer's Disease},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {47:1--47:9},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613000},
doi = {10.1145/3584371.3613000},
timestamp = {Mon, 29 Jul 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/TangZSSY23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/TanvirSIA23,
author = {Farhan Tanvir and
Khaled Mohammed Saifuddin and
Muhammad Ifte Khairul Islam and
Esra Akbas},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Predicting Drug-drug Interactions Using Heterogeneous Graph Attention
Networks},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {48:1--48:6},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613065},
doi = {10.1145/3584371.3613065},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/TanvirSIA23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/TestagroseGEWML23,
author = {Conrad T. Testagrose and
Vikash Gupta and
Barbaros S. Erdal and
Richard D. White and
Robert W. Maxwell and
Xudong Liu and
Indika Kahanda and
Sherif Elfayoumy and
William Klostermeyer and
Mutlu Demirer},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Breast-Density Semantic Segmentation with Probability Scaling for
{BI-RADS} Assessment using DeepLabV3},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {25:1--25:6},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612983},
doi = {10.1145/3584371.3612983},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/TestagroseGEWML23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/TheodorouX023,
author = {Brandon Philip Theodorou and
Cao Xiao and
Jimeng Sun},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {{TREEMENT:} Interpretable Patient-Trial Matching via Personalized
Dynamic Tree-based Memory Network},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {55:1--55:9},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612998},
doi = {10.1145/3584371.3612998},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/TheodorouX023.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/TripathiAHAG23,
author = {Shikha Tripathi and
Alejandro Acien and
Ashley A Holmes and
Teresa Arroyo{-}Gallego and
Luca Giancardo},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Self-Supervised Learning with Touchscreen Typing. {A} Generalizable
Strategy for Parkinson's Disease Detection Across Datasets},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {91:1},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613018},
doi = {10.1145/3584371.3613018},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/TripathiAHAG23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/VaddadiML23,
author = {Naga Sai Kavya Vaddadi and
Taher Mun and
Benjamin Thomas Langmead},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Minimizing Reference Bias: The Impute-First Approach for Personalized
Genome Analysis},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {81:1},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613034},
doi = {10.1145/3584371.3613034},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/VaddadiML23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Viet-NhiLTNDBTH23,
author = {Nguyen{-}Kieu Viet{-}Nhi and
Nguyen{-}Quoc{-}Khanh Le and
Vu Cong Truc and
Thi Thuy Nguyen and
Tran Nguyen Anh Duy and
Nguyen Tu Thai Bao and
How Tseng and
Shih{-}Han Hung},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Predicting Tumor Mutational Burden and Survival in Head and Neck Squamous
Cancer Patients Using Machine Learning and Bioinformatics Approaches},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {87:1},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613038},
doi = {10.1145/3584371.3613038},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Viet-NhiLTNDBTH23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WuMMRV23,
author = {Kwan{-}Ling Wu and
Melisa Montalvo and
Prashant Menon and
Badrinath Roysam and
Navin Varadarajan},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Automated Focus Restoration for High-throughput Phase Contrast Time-lapse
Microscopy with De-noising Diffusion Probabilistic Model},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {58:1},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613029},
doi = {10.1145/3584371.3613029},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/WuMMRV23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WuestneyLCF23,
author = {Katherine A. Wuestney and
Beiyu Lin and
Diane J. Cook and
Roschelle L. Fritz},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Modeling Human Frailty with a Smart Home-Based Approximation of Entropy},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {40:1--40:6},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613017},
doi = {10.1145/3584371.3613017},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/WuestneyLCF23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/XinKP23,
author = {Chu Xin and
Seokhwan Kim and
Kyoung Shin Park},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {A Comparison of Machine Learning Models with Data Augmentation Techniques
for Skeleton-based Human Action Recognition},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {19:1--19:6},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612999},
doi = {10.1145/3584371.3612999},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/XinKP23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/XuYTT23,
author = {Tianshu Xu and
Venkata V. B. Yallapragada and
Mark Tangney and
Sabin Tabirca},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {ProMVR-Interactive Protein Educational Tool},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {88:1},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613060},
doi = {10.1145/3584371.3613060},
timestamp = {Fri, 14 Jun 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/XuYTT23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/XueBCS23,
author = {Liang Xue and
Mykola Bordyuh and
Djork{-}Arn{\'{e}} Clevert and
Robert Stanton},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Benchmarking deep learning models and classical de novo sequencing
tools for immunopeptidomics},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {61:1},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613055},
doi = {10.1145/3584371.3613055},
timestamp = {Tue, 30 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/XueBCS23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/YangLJH23,
author = {Ju{-}Yeh Yang and
Tsung{-}Chun Lee and
Chih{-}Yu Jian and
Chih{-}Chung Hsu},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Multimodality-aware Intra-dialytic Hypotension Classifier: {A} Bilingual
{NLP} Approach to Classify Dialysis Records},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {82:1},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613054},
doi = {10.1145/3584371.3613054},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/YangLJH23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/YangLKJK23,
author = {Jeewon Yang and
Dohoon Lee and
Bonil Koo and
Dabin Jeong and
Sun Kim},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Deep learning-based survival prediction using {DNA} methylation-derived
3D genomic information},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {7:1--7:14},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612966},
doi = {10.1145/3584371.3612966},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/YangLKJK23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/YangS23,
author = {Kevin Kaizhe Yang and
Julian Stanley},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Computational Methods to Determine Genetic Factors in Nicotine Dependency},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {63:1},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613059},
doi = {10.1145/3584371.3613059},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/YangS23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhangC23,
author = {Selina Zhang and
Jake Yue Chen},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Designing Helicobacter pylori as an Anticancer Bacterial Vector},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {69:1},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613032},
doi = {10.1145/3584371.3613032},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ZhangC23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhangZYS023,
author = {Wenlong Zhang and
Kangping Zeng and
Xinming Yang and
Tian Shi and
Ping Wang},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Text-to-ESQ: {A} Two-Stage Controllable Approach for Efficient Retrieval
of Vaccine Adverse Events from NoSQL Database},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {54:1--54:10},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613008},
doi = {10.1145/3584371.3613008},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ZhangZYS023.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhaoBWGK23,
author = {Konghao Zhao and
Sapan Bhandari and
Nathan P. Whitener and
Jason M. Grayson and
Natalia Khuri},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {An Ensemble Machine Learning Approach for Benchmarking and Selection
of scRNA-seq Integration Methods},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {3:1--3:10},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3613072},
doi = {10.1145/3584371.3613072},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ZhaoBWGK23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhengNOBHL23,
author = {Julia Zheng and
Yuya Nishida and
Alicja Okrasinska and
Gregory M. Bonito and
Elizabeth A. C. Heath{-}Heckman and
Kevin J. Liu},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {The Impact of Species Tree Estimation Error on Cophylogenetic Reconstruction},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {18:1--18:10},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612964},
doi = {10.1145/3584371.3612964},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ZhengNOBHL23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhouTTHSL023,
author = {Zhuoping Zhou and
Boning Tong and
Davoud Ataee Tarzanagh and
Bojian Hou and
Andrew J. Saykin and
Qi Long and
Li Shen},
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Multi-Group Tensor Canonical Correlation Analysis},
booktitle = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
pages = {12:1--12:10},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371.3612962},
doi = {10.1145/3584371.3612962},
timestamp = {Fri, 27 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ZhouTTHSL023.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/bcb/2023,
editor = {May D. Wang and
Byung{-}Jun Yoon},
title = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2023, Houston,
TX, USA, September 3-6, 2023},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3584371},
doi = {10.1145/3584371},
timestamp = {Wed, 18 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/2023.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/0008S22,
author = {Zifeng Wang and
Jimeng Sun},
title = {SurvTRACE: transformers for survival analysis with competing events},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {49:1--49:9},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545521},
doi = {10.1145/3535508.3545521},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/0008S22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AnGBMYLH22,
author = {Weizhi An and
Yuzhi Guo and
Yatao Bian and
Hehuan Ma and
Jinyu Yang and
Chunyuan Li and
Junzhou Huang},
title = {MoDNA: motif-oriented pre-training for {DNA} language model},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {5:1--5:5},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545512},
doi = {10.1145/3535508.3545512},
timestamp = {Sun, 04 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/AnGBMYLH22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AsaithambiRR22,
author = {Asai Asaithambi and
Chandrika Rao and
Swapnoneel Roy},
title = {Implementing algorithms for sorting by strip swaps},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {76:1--76:9},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545566},
doi = {10.1145/3535508.3545566},
timestamp = {Mon, 01 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/AsaithambiRR22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BabjacRSE22,
author = {Ashley Babjac and
Taylor M. Royalty and
Andrew D. Steen and
Scott J. Emrich},
title = {A comparison of dimensionality reduction methods for large biological
data},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {15:1--15:7},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545536},
doi = {10.1145/3535508.3545536},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/BabjacRSE22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BaiJJWYN22,
author = {Jun Bai and
Annie Jin and
Andre Jin and
Tianyu Wang and
Clifford Yang and
Sheida Nabavi},
title = {Applying graph convolution neural network in digital breast tomosynthesis
for cancer classification},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {37:1--37:10},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545549},
doi = {10.1145/3535508.3545549},
timestamp = {Mon, 01 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/BaiJJWYN22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BaiLN22,
author = {Jun Bai and
Bingjun Li and
Sheida Nabavi},
title = {Semi-supervised classification of disease prognosis using {CR} images
with clinical data structured graph},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {44:1--44:9},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545548},
doi = {10.1145/3535508.3545548},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/BaiLN22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BarillaroAC22,
author = {Luca Barillaro and
Giuseppe Agapito and
Mario Cannataro},
title = {Scalable deep learning for healthcare: methods and applications},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {73:1--73:8},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545590},
doi = {10.1145/3535508.3545590},
timestamp = {Sun, 04 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/BarillaroAC22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BaskaranRSSO22,
author = {Vishal Athreya Baskaran and
Jolene Ranek and
Siyuan Shan and
Natalie Stanley and
Junier B. Oliva},
title = {Distribution-based sketching of single-cell samples},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {26:1--26:10},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545539},
doi = {10.1145/3535508.3545539},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/BaskaranRSSO22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BhandariWZK22,
author = {Sapan Bhandari and
Nathan P. Whitener and
Konghao Zhao and
Natalia Khuri},
title = {Multi-target integration and annotation of single-cell RNA-sequencing
data},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {29:1--29:4},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545511},
doi = {10.1145/3535508.3545511},
timestamp = {Mon, 01 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/BhandariWZK22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BhattacharyaLLM22,
author = {Avik Bhattacharya and
Molly C. Lyons and
Samuel J. Landry and
Ramgopal R. Mettu},
title = {Incorporating antigen processing into {CD4+} {T} cell epitope prediction
with integer linear programming},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {20:1--20:10},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545545},
doi = {10.1145/3535508.3545545},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/BhattacharyaLLM22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BottinoSC22,
author = {Lorella Bottino and
Marzia Settino and
Mario Cannataro},
title = {Scoliosis management through apps},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {72:1--72:4},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545592},
doi = {10.1145/3535508.3545592},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/BottinoSC22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BuminRSKH22,
author = {Aysegul Bumin and
Anna M. Ritz and
Donna K. Slonim and
Tamer Kahveci and
Kejun Huang},
title = {FiT: fiber-based tensor completion for drug repurposing},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {31:1--31:10},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545527},
doi = {10.1145/3535508.3545527},
timestamp = {Mon, 01 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/BuminRSKH22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Caoili22,
author = {Salvador Eugenio C. Caoili},
title = {B-cell epitope prediction for antipeptide paratopes with the {HAPTIC2/HEPTAD}
user toolkit {(HUT)}},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {61:1},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545101},
doi = {10.1145/3535508.3545101},
timestamp = {Mon, 01 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Caoili22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChuaTB22,
author = {Huey{-}Eng Chua and
Lisa Tucker{-}Kellogg and
Sourav S. Bhowmick},
title = {ArcheGEO: towards improving relevance of gene expression omnibus search
results},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {4:1--4:10},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545531},
doi = {10.1145/3535508.3545531},
timestamp = {Mon, 01 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ChuaTB22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/DangTM22,
author = {Huyen Trang Dang and
Shi Jie Samuel Tan and
Sara Mathieson},
title = {Comparison of cohort-based identical-by-descent {(IBD)} segment finding
methods for endogamous populations},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {64:1},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545104},
doi = {10.1145/3535508.3545104},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/DangTM22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/DasS22,
author = {Supratim Das and
Xinghua Shi},
title = {Offspring {GAN} augments biased human genomic data},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {50:1--50:10},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545537},
doi = {10.1145/3535508.3545537},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/DasS22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ErdenGHLSDC22,
author = {Mert Erden and
Megan Gelement and
Sarrah Hakimjee and
Kyla Levin and
Mary{-}Joy Sidhom and
Kapil Devkota and
Lenore J. Cowen},
title = {Neighborhood embedding and re-ranking of disease genes with {ADAGIO}},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {11:1--11:11},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545542},
doi = {10.1145/3535508.3545542},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ErdenGHLSDC22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GaoWL22,
author = {Meijun Gao and
Wei Wang and
Kevin J. Liu},
title = {The impact of gene sequence alignment and gene tree estimation error
on summary-based species network estimation},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {53:1--53:17},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545559},
doi = {10.1145/3535508.3545559},
timestamp = {Sun, 04 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/GaoWL22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GoelMBBHGMSW22,
author = {Aekansh Goel and
Zachary Mudge and
Sarah Bi and
Charles Brenner and
Nicholas Huffman and
Felipe O. Giuste and
Benoit Marteau and
Wenqi Shi and
May D. Wang},
title = {Identification of covid-19 severity and associated genetic biomarkers
based on scrna-SEQ data},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {45:1--45:5},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545519},
doi = {10.1145/3535508.3545519},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/GoelMBBHGMSW22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Goyal22,
author = {Rushank Goyal},
title = {A novel three-step transcriptomic framework for cancer prediction},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {59:1},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545098},
doi = {10.1145/3535508.3545098},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Goyal22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GoyalC22,
author = {Rushank Goyal and
Rashmi Chowdhary},
title = {Antibiotic resistance prediction and biomarker discovery in \emph{Neisseria
gonorrhoeae}},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {58:1},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545097},
doi = {10.1145/3535508.3545097},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/GoyalC22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GuanZ22,
author = {Hannah Guan and
Chonghao Zhang},
title = {Predicting diabetes in imbalanced datasets using neural networks},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {57:1--57:10},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545540},
doi = {10.1145/3535508.3545540},
timestamp = {Mon, 01 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/GuanZ22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HornbackSGZCHBS22,
author = {Andrew Hornback and
Wenqi Shi and
Felipe O. Giuste and
Yuanda Zhu and
Ashley M. Carpenter and
Coleman Hilton and
Vinieth N. Bijanki and
Hiram Stahl and
Gary S. Gottesman and
Chad Purnell and
Henry J. Iwinski and
J. Michael Wattenbarger and
May D. Wang},
title = {Development of a generalizable multi-site and multi-modality clinical
data cloud infrastructure for pediatric patient care},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {23:1--23:10},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545565},
doi = {10.1145/3535508.3545565},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/HornbackSGZCHBS22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HrytsenkoDS22,
author = {Yana Hrytsenko and
Noah M. Daniels and
Rachel S. Schwartz},
title = {Determining population structure from k-mer frequencies},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {60:1},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545100},
doi = {10.1145/3535508.3545100},
timestamp = {Mon, 01 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/HrytsenkoDS22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/JinV22,
author = {Zheming Jin and
Jeffrey S. Vetter},
title = {Performance portability study of epistasis detection using {SYCL}
on {NVIDIA} {GPU}},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {69:1--69:8},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545591},
doi = {10.1145/3535508.3545591},
timestamp = {Mon, 01 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/JinV22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/JohnstenPDBC22,
author = {Tom Johnsten and
Aishwarya Prakash and
Grant T. Daly and
Ryan G. Benton and
Tristan Clark},
title = {Computational framework for generating synthetic signal peptides},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {30:1--30:7},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545530},
doi = {10.1145/3535508.3545530},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/JohnstenPDBC22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KaturiRF22,
author = {Gangadhar Katuri and
Epaminondas Rosa Jr. and
Rosangela Follmann},
title = {Detecting synchronization in brain activity},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {66:1},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545106},
doi = {10.1145/3535508.3545106},
timestamp = {Mon, 01 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/KaturiRF22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KeV22,
author = {Ziqi Ke and
Haris Vikalo},
title = {Deep learning for assembly of haplotypes and viral quasispecies from
short and long sequencing reads},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {3:1--3:10},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545524},
doi = {10.1145/3535508.3545524},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/KeV22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KhuriBBWZ22,
author = {Natalia Khuri and
Sapan Bhandari and
Esteban Murillo Burford and
Nathan P. Whitener and
Konghao Zhao},
title = {An evolutionary approach to data valuation},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {43:1--43:10},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545522},
doi = {10.1145/3535508.3545522},
timestamp = {Mon, 01 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/KhuriBBWZ22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KimT022,
author = {Suyeon Kim and
Ishwor Thapa and
Hesham Ali},
title = {A multi-omics graph database for data integration and knowledge extraction},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {56:1--56:6},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545517},
doi = {10.1145/3535508.3545517},
timestamp = {Mon, 01 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/KimT022.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KolawoleC22,
author = {Blessing Kolawole and
Lenore J. Cowen},
title = {Combining spectral clustering and large cut algorithms to find compensatory
functional modules from yeast physical and genetic interaction data
with {GLASS}},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {14:1--14:4},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545509},
doi = {10.1145/3535508.3545509},
timestamp = {Mon, 01 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/KolawoleC22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KumarYKAMP22,
author = {Sayantan Kumar and
Sean C. Yu and
Thomas George Kannampallil and
Zachary B. Abrams and
Andrew P. Michelson and
Philip R. O. Payne},
title = {Self-explaining neural network with concept-based explanations for
{ICU} mortality prediction},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {8:1--8:9},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545547},
doi = {10.1145/3535508.3545547},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/KumarYKAMP22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiuLY22,
author = {Zheng Liu and
Xiaohan Li and
Philip S. Yu},
title = {Mitigating health disparities in {EHR} via deconfounder},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {6:1--6:6},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545516},
doi = {10.1145/3535508.3545516},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/LiuLY22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiuZJS22,
author = {Yuxi Liu and
Zhenhao Zhang and
Antonio Jimeno{-}Yepes and
Flora D. Salim},
title = {Modeling long-term dependencies and short-term correlations in patient
journey data with temporal attention networks for health prediction},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {16:1--16:10},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545535},
doi = {10.1145/3535508.3545535},
timestamp = {Mon, 01 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/LiuZJS22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LuYQGD22,
author = {Yuxuan Lu and
Jingya Yan and
Zhixuan Qi and
Zhongzheng Ge and
Yongping Du},
title = {Contextual embedding and model weighting by fusing domain knowledge
on biomedical question answering},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {54:1--54:4},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545508},
doi = {10.1145/3535508.3545508},
timestamp = {Mon, 30 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/LuYQGD22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MaJRGH22,
author = {Hehuan Ma and
Feng Jiang and
Yu Rong and
Yuzhi Guo and
Junzhou Huang},
title = {Robust self-training strategy for various molecular biology prediction
tasks},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {34:1--34:5},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545998},
doi = {10.1145/3535508.3545998},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/MaJRGH22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MannoneD22,
author = {Maria Mannone and
Veronica Distefano},
title = {Trajectory-based and sound-based medical data clustering},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {62:1},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545102},
doi = {10.1145/3535508.3545102},
timestamp = {Mon, 01 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/MannoneD22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MartinisZC22,
author = {Maria Chiara Martinis and
Chiara Zucco and
Mario Cannataro},
title = {An Italian lexicon-based sentiment analysis approach for medical applications},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {70:1--70:4},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545594},
doi = {10.1145/3535508.3545594},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/MartinisZC22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MazloomPBVH22,
author = {Reza Mazloom and
Leighton Pritchard and
C. Titus Brown and
Boris A. Vinatzer and
Lenwood S. Heath},
title = {LINgroups as a principled approach to compare and integrate multiple
bacterial taxonomies},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {55:1--55:7},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545546},
doi = {10.1145/3535508.3545546},
timestamp = {Mon, 01 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/MazloomPBVH22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/OdigweROSV22,
author = {Brendan E. Odigwe and
Alireza Bagheri Rajeoni and
Celestine I. Odigwe and
Francis G. Spinale and
Homayoun Valafar},
title = {Application of machine learning for patient response prediction to
cardiac resynchronization therapy},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {47:1--47:4},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545513},
doi = {10.1145/3535508.3545513},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/OdigweROSV22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/PastorinoB22,
author = {Javier Pastorino and
Ashis Kumer Biswas},
title = {Data adequacy bias impact in a data-blinded semi-supervised {GAN}
for privacy-aware {COVID-19} chest X-ray classification},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {36:1--36:8},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545560},
doi = {10.1145/3535508.3545560},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/PastorinoB22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/PeckhamPOH22,
author = {Joan Peckham and
Andy D. Perkins and
Tayo Obafemi{-}Ajayi and
Xiuzhen Huang},
title = {{NBT} (no-boundary thinking): needed to attend to ethical implications
of data and {AI}},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {74:1--74:2},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545595},
doi = {10.1145/3535508.3545595},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/PeckhamPOH22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/PerkinsPOH22,
author = {Andy D. Perkins and
Joan Peckham and
Tayo Obafemi{-}Ajayi and
Xiuzhen Huang},
title = {Team building without boundaries},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {75:1--75:3},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545596},
doi = {10.1145/3535508.3545596},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/PerkinsPOH22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/PeskinCHP22,
author = {Adele P. Peskin and
Joe Chalfoun and
Michael Halter and
Anne L. Plant},
title = {Semi-supervised 3D neural networks to track iPS cell division in label-free
phase contrast time series images},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {24:1--24:7},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545532},
doi = {10.1145/3535508.3545532},
timestamp = {Mon, 01 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/PeskinCHP22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Poonawala-Lohani22,
author = {Nooriyan Poonawala{-}Lohani and
Patricia Riddle and
Mehnaz Adnan and
J{\"{o}}rg Wicker},
title = {Geographic ensembles of observations using randomised ensembles of
autoregression chains: ensemble methods for spatio-temporal time series
forecasting of influenza-like illness},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {42:1--42:7},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545562},
doi = {10.1145/3535508.3545562},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Poonawala-Lohani22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/RahbarCSCSH22,
author = {Mahdi Rahbar and
Rahul Kumar Chauhan and
Pankil Nimeshbhai Shah and
Renzhi Cao and
Dong Si and
Jie Hou},
title = {Deep graph learning to estimate protein model quality using structural
constraints from multiple sequence alignments},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {21:1--21:10},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545558},
doi = {10.1145/3535508.3545558},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/RahbarCSCSH22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Raj22,
author = {Vinay Raj},
title = {Analysis of impact of diabetes mellitus in Arkansas and {U.S}},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {68:1},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545108},
doi = {10.1145/3535508.3545108},
timestamp = {Mon, 01 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Raj22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/RajkumarJBWYSB22,
author = {Utkrisht Rajkumar and
Sara Javadzadeh and
Mihir Bafna and
Dongxia Wu and
Rose Yu and
Jingbo Shang and
Vineet Bafna},
title = {DeepViFi: detecting oncoviral infections in cancer genomes using transformers},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {2:1--2:8},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545551},
doi = {10.1145/3535508.3545551},
timestamp = {Mon, 01 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/RajkumarJBWYSB22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/RamaziBB22,
author = {Ramin Ramazi and
Mary Elizabeth Bowen and
Rahmatollah Beheshti},
title = {Predicting acute events using the movement patterns of older adults:
an unsupervised clustering method},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {19:1--19:9},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545561},
doi = {10.1145/3535508.3545561},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/RamaziBB22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/RemitaD22,
author = {Amine M. Remita and
Abdoulaye Banir{\'{e}} Diallo},
title = {EvoVGM: a deep variational generative model for evolutionary parameter
estimation},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {1:1--1:10},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545563},
doi = {10.1145/3535508.3545563},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/RemitaD22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/RenSBHVDK22,
author = {Yuanfang Ren and
Aisharjya Sarkar and
Aysegul Bumin and
Kejun Huang and
Pierangelo Veltri and
Alin Dobra and
Tamer Kahveci},
title = {Identification of co-existing embeddings of a motif in multilayer
networks},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {39:1--39:10},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545528},
doi = {10.1145/3535508.3545528},
timestamp = {Mon, 01 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/RenSBHVDK22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ReyesKC0Y22,
author = {Diego Machado Reyes and
Mansu Kim and
Hanqing Chao and
Li Shen and
Pingkun Yan},
title = {Connectome transformer with anatomically inspired attention for Parkinson's
diagnosis},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {35:1--35:4},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545544},
doi = {10.1145/3535508.3545544},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ReyesKC0Y22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/RoyG22,
author = {Satyaki Roy and
Preetam Ghosh},
title = {Examining post-pandemic behaviors influencing human mobility trends},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {40:1--40:10},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545552},
doi = {10.1145/3535508.3545552},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/RoyG22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/SadasivuniZ22,
author = {Sudha Tushara Sadasivuni and
Yanqing Zhang},
title = {Timestamp analysis of mental health tweets of Twitter users along
with {COVID-19} confirmed cases},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {33:1--33:6},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545543},
doi = {10.1145/3535508.3545543},
timestamp = {Wed, 22 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/SadasivuniZ22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/SarkarSBDK22,
author = {Aisharjya Sarkar and
Aaditya Singh and
Richard Bailey and
Alin Dobra and
Tamer Kahveci},
title = {Optimal separation of high dimensional transcriptome for complex multigenic
traits},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {32:1--32:5},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545506},
doi = {10.1145/3535508.3545506},
timestamp = {Mon, 01 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/SarkarSBDK22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ShanBYRSO22,
author = {Siyuan Shan and
Vishal Athreya Baskaran and
Haidong Yi and
Jolene Ranek and
Natalie Stanley and
Junier B. Oliva},
title = {Transparent single-cell set classification with kernel mean embeddings},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {25:1--25:10},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545538},
doi = {10.1145/3535508.3545538},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ShanBYRSO22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/StroblL22,
author = {Eric V. Strobl and
Thomas A. Lasko},
title = {Identifying patient-specific root causes of disease},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {18:1--18:10},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545553},
doi = {10.1145/3535508.3545553},
timestamp = {Mon, 01 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/StroblL22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/SultanGS22,
author = {Syed Fahad Sultan and
Xingzhi Guo and
Steven Skiena},
title = {Low-dimensional genotype embeddings for predictive models},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {52:1--52:4},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545507},
doi = {10.1145/3535508.3545507},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/SultanGS22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/TavakoliGA22,
author = {Neda Tavakoli and
Daniel Gibney and
Srinivas Aluru},
title = {Haplotype-aware variant selection for genome graphs},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {51:1--51:9},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545556},
doi = {10.1145/3535508.3545556},
timestamp = {Mon, 01 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/TavakoliGA22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/TavoriL22,
author = {Jhonatan Tavori and
Hanoch Levy},
title = {Greedy and speedy: optimal vaccination strategies in multi-region
heterogeneous networks},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {67:1},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545107},
doi = {10.1145/3535508.3545107},
timestamp = {Mon, 01 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/TavoriL22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/TrinhHB22,
author = {Van{-}Giang Trinh and
Kunihiko Hiraishi and
Belaid Benhamou},
title = {Computing attractors of large-scale asynchronous boolean networks
using minimal trap spaces},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {13:1--13:10},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545520},
doi = {10.1145/3535508.3545520},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/TrinhHB22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/TurnerBO22,
author = {Maor Turner and
Mira Barshai and
Yaron Orenstein},
title = {rG4detector: convolutional neural network to predict {RNA} G-quadruplex
propensity based on rG4-seq data},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {22:1--22:9},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545534},
doi = {10.1145/3535508.3545534},
timestamp = {Mon, 01 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/TurnerBO22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/VizzaCGV22,
author = {Patrizia Vizza and
Mattia Cannistr{\`{a}} and
Raffaele Giancotti and
Pierangelo Veltri},
title = {Image processing segmentation algorithms evaluation through implementation
choices},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {71:1--71:7},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545593},
doi = {10.1145/3535508.3545593},
timestamp = {Mon, 01 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/VizzaCGV22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Wang0P22,
author = {Yuqing Wang and
Yun Zhao and
Linda R. Petzold},
title = {Predicting the need for blood transfusion in intensive care units
with reinforcement learning},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {7:1--7:10},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545523},
doi = {10.1145/3535508.3545523},
timestamp = {Mon, 01 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Wang0P22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WangJZMRS22,
author = {Honglin Wang and
Pujan Joshi and
Chenyu Zhang and
Peter F. Maye and
David W. Rowe and
Dong{-}Guk Shin},
title = {rCom: a route-based framework inferring cell type communication and
regulatory network using single cell data},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {27:1--27:4},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545514},
doi = {10.1145/3535508.3545514},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/WangJZMRS22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WangSACR22,
author = {Ping Wang and
Tian Shi and
Khushbu Agarwal and
Sutanay Choudhury and
Chandan K. Reddy},
title = {Attention-based aspect reasoning for knowledge base question answering
on clinical notes},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {10:1--10:6},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545518},
doi = {10.1145/3535508.3545518},
timestamp = {Wed, 18 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/WangSACR22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WanyanLKMGAZ0W022,
author = {Tingyi Wanyan and
Mingquan Lin and
Eyal Klang and
Kartikeya M. Menon and
Faris F. Gulamali and
Ariful Azad and
Yiye Zhang and
Ying Ding and
Zhangyang Wang and
Fei Wang and
Benjamin S. Glicksberg and
Yifan Peng},
title = {Supervised pretraining through contrastive categorical positive samplings
to improve {COVID-19} mortality prediction},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {9:1--9:9},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545541},
doi = {10.1145/3535508.3545541},
timestamp = {Mon, 01 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/WanyanLKMGAZ0W022.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WeiW22,
author = {Anqi Wei and
Liangjiang Wang},
title = {Deep sequence representation learning for predicting human proteins
with liquid-liquid phase separation propensity and synaptic functions},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {41:1--41:8},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545550},
doi = {10.1145/3535508.3545550},
timestamp = {Mon, 01 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/WeiW22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/XieWHS022,
author = {Zongxing Xie and
Hanrui Wang and
Song Han and
Elinor Schoenfeld and
Fan Ye},
title = {DeepVS: a deep learning approach for RF-based vital signs sensing},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {17:1--17:5},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545554},
doi = {10.1145/3535508.3545554},
timestamp = {Thu, 25 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/XieWHS022.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/YiS22,
author = {Haidong Yi and
Natalie Stanley},
title = {CytoEMD: detecting and visualizing between-sample variation in relation
to phenotype with earth mover's distance},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {28:1--28:14},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545525},
doi = {10.1145/3535508.3545525},
timestamp = {Mon, 01 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/YiS22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/YurovskyGFS22,
author = {Alisa Yurovsky and
Justin Gardin and
Bruce Futcher and
Steven Skiena},
title = {Statistical methodology for ribosomal frameshift detection},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {12:1--12:10},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545529},
doi = {10.1145/3535508.3545529},
timestamp = {Mon, 01 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/YurovskyGFS22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZellerSTSLKZG22,
author = {Michael A. Zeller and
Anugrah Saxena and
Giovani Trevisan and
Aditi Sharma and
Daniel Linhares and
Karen M. Krueger and
Jianqiang Zhang and
Phillip C. Gauger},
title = {PRRSView: an analytical platform for the assessment of {PRRSV} {ORF5}
genetic sequences},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {65:1},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545105},
doi = {10.1145/3535508.3545105},
timestamp = {Mon, 05 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ZellerSTSLKZG22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZengYZZ22,
author = {Li Zeng and
Zhaolong Yu and
Yiliang Zhang and
Hongyu Zhao},
title = {A general kernel boosting framework integrating pathways for predictive
modeling based on genomic data},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {48:1--48:8},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545526},
doi = {10.1145/3535508.3545526},
timestamp = {Sun, 04 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ZengYZZ22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhangXC22,
author = {Jingwen Zhang and
Enze Xu and
Minghan Chen},
title = {AT[N]-net: multimodal spatiotemporal network for subtype identification
in Alzheimer's disease},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {63:1},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545103},
doi = {10.1145/3535508.3545103},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ZhangXC22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhuMPMGAW22,
author = {Yuanda Zhu and
Aishwarya Mahale and
Kourtney Peters and
Lejy Mathew and
Felipe O. Giuste and
Blake J. Anderson and
May D. Wang},
title = {Using natural language processing on free-text clinical notes to identify
patients with long-term {COVID} effects},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {46:1--46:9},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545555},
doi = {10.1145/3535508.3545555},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ZhuMPMGAW22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhuZP22,
author = {Lillian Zhu and
Feng Zhu and
Jodi Price},
title = {TopographyNET: a deep learning model for EEG-based mind wandering
detection},
booktitle = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
pages = {38:1--38:10},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508.3545533},
doi = {10.1145/3535508.3545533},
timestamp = {Fri, 07 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ZhuZP22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/bcb/2022,
title = {{BCB} '22: 13th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Northbrook, Illinois,
USA, August 7 - 10, 2022},
publisher = {{ACM}},
year = {2022},
url = {https://doi.org/10.1145/3535508},
doi = {10.1145/3535508},
isbn = {978-1-4503-9386-7},
timestamp = {Mon, 01 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/2022.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/0001GC021,
author = {Mike Wong and
Saeideh Ghahghaei and
Arvind Chandna and
Anagha Kulkarni},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Scalable non-invasive pediatric cerebral visual impairment screening
with the higher visual function question inventory {(HVFQI)}},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {66:1},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469495},
doi = {10.1145/3459930.3469495},
timestamp = {Wed, 04 Aug 2021 13:34:07 +0200},
biburl = {https://dblp.org/rec/conf/bcb/0001GC021.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/0001LJ021,
author = {Mike Wong and
Nayana Laxmeshwar and
Rachit Joshi and
Anagha Kulkarni},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Browsing weighted interactome models using GeneDive},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {65:1},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469494},
doi = {10.1145/3459930.3469494},
timestamp = {Wed, 04 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/0001LJ021.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AhmedAMJ21,
author = {Tanbir Ahmed and
Md Momin Al Aziz and
Noman Mohammed and
Xiaoqian Jiang},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Privacy preserving neural networks for electronic health records de-identification},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {8:1--8:6},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469555},
doi = {10.1145/3459930.3469555},
timestamp = {Wed, 04 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/AhmedAMJ21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Asif21,
author = {Md. Sadek Hossain Asif},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Developing a modified version of generative adversarial network to
predict the potential anti-viral drug of {COVID-19}},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {60:1},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469489},
doi = {10.1145/3459930.3469489},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Asif21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AydayYH21,
author = {Erman Ayday and
Youngjin Yoo and
Anisa Halimi},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {ShareTrace: an iterative message passing algorithm for efficient and
effective disease risk assessment on an interaction graph},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {39:1--39:6},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469553},
doi = {10.1145/3459930.3469553},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/AydayYH21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BakerDBHL21,
author = {Daniel N. Baker and
Nathan Dyjack and
Vladimir Braverman and
Stephanie C. Hicks and
Ben Langmead},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Fast and memory-efficient scRNA-seq \emph{k}-means clustering with
various distances},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {24:1--24:8},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469523},
doi = {10.1145/3459930.3469523},
timestamp = {Wed, 04 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/BakerDBHL21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BealPN21,
author = {Christopher R. Beal and
John G. Peters and
Ronald J. Nowling},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Sequence model evaluation framework for STARR-seq peak calling},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {59:1},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469488},
doi = {10.1145/3459930.3469488},
timestamp = {Wed, 04 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/BealPN21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Ben-AriFPOS21,
author = {Yael Ben{-}Ari and
Dan Flomin and
Lianrong Pu and
Yaron Orenstein and
Ron Shamir},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Improving the efficiency of de Bruijn graph construction using compact
universal hitting sets},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {4:1--4:9},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469520},
doi = {10.1145/3459930.3469520},
timestamp = {Wed, 04 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Ben-AriFPOS21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BoatengNV21,
author = {Linkel Boateng and
Anita Nag and
Homayoun Valafar},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Computational modeling of SARS-CoV-2 Nsp1 binding to human ribosomal
40S complex},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {22:1--22:6},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469554},
doi = {10.1145/3459930.3469554},
timestamp = {Wed, 04 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/BoatengNV21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BobdeAWH21,
author = {Shravani Bobde and
Fahad Alsaab and
Guangshun Wang and
Monique L. van Hoek},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Designing novel antimicrobial peptides against multi-drug resistant
bacteria},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {78:1},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469507},
doi = {10.1145/3459930.3469507},
timestamp = {Wed, 04 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/BobdeAWH21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BoseSSHPKG21,
author = {Priyankar Bose and
William C. Sleeman IV and
Khajamoinuddin Syed and
Michael Hagan and
Jatinder Palta and
Rishabh Kapoor and
Preetam Ghosh},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Deep neural network models to automate incident triage in the radiation
oncology incident learning system},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {51:1--51:10},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469518},
doi = {10.1145/3459930.3469518},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/BoseSSHPKG21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BrandBW21,
author = {Lodewijk Brand and
Lauren Zoe Baker and
Hua Wang},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {A multi-instance support vector machine with incomplete data for clinical
outcome prediction of {COVID-19}},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {44:1--44:6},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469552},
doi = {10.1145/3459930.3469552},
timestamp = {Fri, 13 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/BrandBW21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Canales-FiscalL21,
author = {Martha Rebeca Canales{-}Fiscal and
Roc{\'{\i}}o Ortiz L{\'{o}}pez and
Regina Barzilay and
Victor Trevi{\~{n}}o and
Servando Cardona{-}Huerta and
Luis Javier Ram{\'{\i}}rez{-}Trevi{\~{n}}o and
Adam Yala and
Jos{\'{e}} G. Tamez{-}Pe{\~{n}}a},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {{COVID-19} classification using thermal images: thermal images capability
for identifying {COVID-19} using traditional machine learning classifiers},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {34:1--34:5},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469558},
doi = {10.1145/3459930.3469558},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Canales-FiscalL21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/CannistraYS21,
author = {Caroline Cannistra and
Alex Yuan and
Wenying Shou},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Inferring interaction networks from microbial time series data: it's
not just finding a statistic},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {75:1},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469504},
doi = {10.1145/3459930.3469504},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/CannistraYS21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChenGEL21,
author = {Cheng Chen and
Stephen K. Grady and
Sally R. Ellingson and
Michael A. Langston},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Gene-disease-drug link prediction using tripartite graphs},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {76:1},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469505},
doi = {10.1145/3459930.3469505},
timestamp = {Wed, 04 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ChenGEL21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/DavidsonTEWEPS21,
author = {Russell B. Davidson and
Mathialakan Thavappiragasam and
T. Chad Effler and
Jess Woods and
Dwayne A. Elias and
Jerry M. Parks and
Ada Sedova},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Modeling protein structures from predicted contacts with modern molecular
dynamics potentials: accuracy, sensitivity, and refinement},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {21:1--21:10},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469510},
doi = {10.1145/3459930.3469510},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/DavidsonTEWEPS21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/DebopadhayaEB21,
author = {Shayom Debopadhaya and
John S. Erickson and
Kristin P. Bennett},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Temporal analysis of social determinants associated with {COVID-19}
mortality},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {41:1--41:10},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469535},
doi = {10.1145/3459930.3469535},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/DebopadhayaEB21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/DuRMM21,
author = {Yuhan Du and
Anthony R. Rafferty and
Fionnuala M. McAuliffe and
Catherine Mooney},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Explaining large-for-gestational-age births: a random forest classifier
with a novel local interpretation method},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {64:1},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469493},
doi = {10.1145/3459930.3469493},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/DuRMM21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/FeigerLRBDVVHR21,
author = {Bradley Feiger and
Erick Lorenzana and
David Ranney and
Muath Bishawi and
Julie Doberne and
Andrew Vekstein and
Soraya Voigt and
G. Chad Hughes and
Amanda Randles},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Predicting aneurysmal degeneration of type {B} aortic dissection with
computational fluid dynamics},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {13:1--13:6},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469563},
doi = {10.1145/3459930.3469563},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/FeigerLRBDVVHR21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Feng21,
author = {Alice Feng},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Using electronic health records to accurately predict {COVID-19} health
outcomes through a novel machine learning pipeline},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {61:1},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469490},
doi = {10.1145/3459930.3469490},
timestamp = {Wed, 04 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Feng21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/FuXHGS21,
author = {Tianfan Fu and
Cao Xiao and
Kexin Huang and
Lucas M. Glass and
Jimeng Sun},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {{SPEAR:} self-supervised post-training enhancer for molecule optimization},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {27:1--27:10},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469530},
doi = {10.1145/3459930.3469530},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/FuXHGS21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/FujimotoMRSSUIB21,
author = {Kenji Fujimoto and
Tsubasa Mizugaki and
Utkrisht Rajkumar and
Hironori Shigeta and
Shigeto Seno and
Yutaka Uchida and
Masaru Ishii and
Vineet Bafna and
Hideo Matsuda},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {A CNN-based cell tracking method for multi-slice intravital imaging
data},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {35:1--35:7},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469559},
doi = {10.1145/3459930.3469559},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/FujimotoMRSSUIB21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GaoL21,
author = {Meijun Gao and
Kevin J. Liu},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Statistical analysis of GC-biased gene conversion and recombination
hotspots in eukaryotic genomes: a phylogenetic hidden Markov model-based
approach},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {15:1--15:24},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469509},
doi = {10.1145/3459930.3469509},
timestamp = {Sun, 04 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/GaoL21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GodaseRA21,
author = {Anuj Godase and
Md. Khaledur Rahman and
Ariful Azad},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {GNNfam: utilizing sparsity in protein family predictions using graph
neural networks},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {37:1--37:10},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469538},
doi = {10.1145/3459930.3469538},
timestamp = {Wed, 04 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/GodaseRA21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GolmaeiL21,
author = {Sara Nouri Golmaei and
Xiao Luo},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {DeepNote-GNN: predicting hospital readmission using clinical notes
and patient network},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {19:1--19:9},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469547},
doi = {10.1145/3459930.3469547},
timestamp = {Sat, 15 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/GolmaeiL21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Guan21,
author = {Hannah Guan},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {The genetics of human aging: predicting age and age-related diseases
by deep mining high dimensional biomarker data},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {79:1},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469508},
doi = {10.1145/3459930.3469508},
timestamp = {Wed, 04 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Guan21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GuptaPBB21,
author = {Mehak Gupta and
Thao{-}Ly T. Phan and
H. Timothy Bunnell and
Rahmatollah Beheshti},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Concurrent imputation and prediction on {EHR} data using bi-directional
GANs: Bi-GANs for {EHR} imputation and prediction},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {7:1--7:9},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469512},
doi = {10.1145/3459930.3469512},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/GuptaPBB21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GuptaRJK21,
author = {Riya Gupta and
Aditya M. Rao and
Lara Murphy Jones and
Purvesh Khatri},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Formulating a gene signature for diagnosis of autoimmune and infectious
diseases},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {68:1},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469497},
doi = {10.1145/3459930.3469497},
timestamp = {Thu, 23 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/GuptaRJK21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HoffmannMR21,
author = {Marie Hoffmann and
Michael T. Monaghan and
Knut Reinert},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {PriSeT: efficient \emph{de novo} primer discovery},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {2:1--2:12},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469546},
doi = {10.1145/3459930.3469546},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/HoffmannMR21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/JeonCSHY21,
author = {Seoungdeok Jeon and
Zachary Colburn and
Joshua Sakai and
Ling{-}Hong Hung and
Ka Yee Yeung},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Application of natural language processing and machine learning to
radiology reports},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {67:1},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469496},
doi = {10.1145/3459930.3469496},
timestamp = {Wed, 04 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/JeonCSHY21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KarinMO21,
author = {Jonathan Karin and
Hagai Michel and
Yaron Orenstein},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {MultiRBP: multi-task neural network for protein-RNA binding prediction},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {11:1--11:9},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469525},
doi = {10.1145/3459930.3469525},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/KarinMO21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KashfeenM21,
author = {Anwica Kashfeen and
Leonard McMillan},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Frontier: finding the boundaries of novel transposable element insertions
in genomes},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {14:1--14:10},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469545},
doi = {10.1145/3459930.3469545},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/KashfeenM21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KassabyGCB21,
author = {Bah{\'{a}} El Kassaby and
Kunde Ramamoorthy Govindarajan and
Francisco Castellanos and
Carol Bult},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {{MVAR:} a mouse variation registry},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {74:1},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469503},
doi = {10.1145/3459930.3469503},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/KassabyGCB21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KesimogluB21,
author = {Ziynet Nesibe Kesimoglu and
Serdar Bozdag},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {{SUPREME:} a cancer subtype prediction methodology integrating multiple
biological datatypes using graph convolutional neural networks},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {83:1},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3470853},
doi = {10.1145/3459930.3470853},
timestamp = {Wed, 04 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/KesimogluB21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KhuriP21,
author = {Natalia Khuri and
Sarah Parsons},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {A value-based approach for training of classifiers with high-throughput
small molecule screening data},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {28:1--28:10},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469514},
doi = {10.1145/3459930.3469514},
timestamp = {Wed, 04 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/KhuriP21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KoningPW21,
author = {Elizabeth R. Koning and
Malachi Phillips and
Tandy J. Warnow},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {ppIacerDC: a new scalable phylogenetic placement method},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {3:1--3:9},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469516},
doi = {10.1145/3459930.3469516},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/KoningPW21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KumarS21,
author = {Sumesh Kumar and
Fahad Saeed},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Real-time peptide identification from high-throughput mass-spectrometry
data},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {86:1},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3470856},
doi = {10.1145/3459930.3470856},
timestamp = {Wed, 04 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/KumarS21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LanchantinWSMQ21,
author = {Jack Lanchantin and
Tom Weingarten and
Arshdeep Sekhon and
Clint Miller and
Yanjun Qi},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Transfer learning for predicting virus-host protein interactions for
novel virus sequences},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {36:1--36:10},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469527},
doi = {10.1145/3459930.3469527},
timestamp = {Wed, 04 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/LanchantinWSMQ21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiK21,
author = {Zican Li and
Wooyoung Kim},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Investigating statistical analysis for network motifs},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {40:1--40:6},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469566},
doi = {10.1145/3459930.3469566},
timestamp = {Wed, 04 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/LiK21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiL21,
author = {Russell A. Li and
Zhandong Liu},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {A hybrid deep neural network for robust single-cell genome-wide {DNA}
methylation detection},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {25:1--25:6},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469565},
doi = {10.1145/3459930.3469565},
timestamp = {Wed, 04 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/LiL21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiLKGZ21,
author = {Zhao Li and
Rongbin Li and
Kendall J. Kiser and
Luca Giancardo and
W. Jim Zheng},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Segmenting thoracic cavities with neoplastic lesions: a head-to-head
benchmark with fully convolutional neural networks},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {33:1--33:8},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469564},
doi = {10.1145/3459930.3469564},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/LiLKGZ21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiW21,
author = {Zhuoyan Li and
Sheng Wang},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {{HYPON:} embedding biomedical ontology with entity sets},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {56:1--56:7},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469515},
doi = {10.1145/3459930.3469515},
timestamp = {Wed, 20 Jul 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/LiW21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiWN21,
author = {Bingjun Li and
Tianyu Wang and
Sheida Nabavi},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Cancer molecular subtype classification by graph convolutional networks
on multi-omics data},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {50:1--50:9},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469542},
doi = {10.1145/3459930.3469542},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/LiWN21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiuL0WL21,
author = {Jinpeng Liu and
Xinan Liu and
Ye Yu and
Chi Wang and
Jinze Liu},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {FastCount: a fast gene count software for single-cell RNA-seq data},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {23:1--23:8},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469544},
doi = {10.1145/3459930.3469544},
timestamp = {Thu, 15 Sep 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/LiuL0WL21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiuONC21,
author = {Lucas Jing Liu and
Victor Ortiz{-}Soriano and
Javier A. Neyra and
Jin Chen},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {{KGDAL:} knowledge graph guided double attention {LSTM} for rolling
mortality prediction for {AKI-D} patients},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {53:1--53:10},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469513},
doi = {10.1145/3459930.3469513},
timestamp = {Tue, 10 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/LiuONC21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LosinV21,
author = {Lauren Losin and
Daniel Veltri},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Exploring target specificity of antimicrobial peptides through deep
learning embeddings},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {77:1},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469506},
doi = {10.1145/3459930.3469506},
timestamp = {Wed, 04 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/LosinV21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LyonsLCCBCD21,
author = {Robert Lyons and
Geoffrey Ross Low and
Clare Bates Congdon and
Melissa Ceruolo and
Marissa Ballesteros and
Steven Cambria and
Paolo DePetrillo},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Towards an extensible ontology for streaming sensor data for clinical
trials},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {48:1--48:6},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469562},
doi = {10.1145/3459930.3469562},
timestamp = {Wed, 04 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/LyonsLCCBCD21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MancusoSC21,
author = {Rossana Mancuso and
Marzia Settino and
Mario Cannataro},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Data mining for electroencephalogram signal processing and analysis},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {81:1--81:10},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3470905},
doi = {10.1145/3459930.3470905},
timestamp = {Wed, 04 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/MancusoSC21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MandyamYSLE21,
author = {Aishwarya Mandyam and
Elizabeth C. Yoo and
Jeff Soules and
Krzysztof Laudanski and
Barbara E. Engelhardt},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {{COP-E-CAT:} cleaning and organization pipeline for {EHR} computational
and analytic tasks},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {5:1--5:9},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469536},
doi = {10.1145/3459930.3469536},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/MandyamYSLE21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MbuguiroG21,
author = {Wangui Mbuguiro and
Feilim Mac Gabhann},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Mechanistic model demonstrates importance of autocrine {IL-8} secretion
by neutrophils},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {71:1},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469500},
doi = {10.1145/3459930.3469500},
timestamp = {Wed, 04 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/MbuguiroG21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MichardLPMG21,
author = {Hugo Michard and
Bertrand Luvison and
Quoc Cuong Pham and
Antonio J. Morales{-}Artacho and
Ga{\"{e}}l Guilhem},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {AW-Net: automatic muscle structure analysis on B-mode ultrasound images
for injury prevention},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {31:1--31:9},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469531},
doi = {10.1145/3459930.3469531},
timestamp = {Wed, 04 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/MichardLPMG21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MohammadS21,
author = {Umair Mohammad and
Fahad Saeed},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Search feasibility in distributed MS-proteomics big data},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {85:1},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3470855},
doi = {10.1145/3459930.3470855},
timestamp = {Wed, 04 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/MohammadS21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MohanAMM21,
author = {Sunil Mohan and
Rico Angell and
Nicholas Monath and
Andrew McCallum},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Low resource recognition and linking of biomedical concepts from a
large ontology},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {54:1--54:10},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469524},
doi = {10.1145/3459930.3469524},
timestamp = {Wed, 04 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/MohanAMM21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/NarenZW21,
author = {Tarun Naren and
Yuanda Zhu and
May Dongmei Wang},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {{COVID-19} diagnosis using model agnostic meta-learning on limited
chest X-ray images},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {42:1--42:9},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469517},
doi = {10.1145/3459930.3469517},
timestamp = {Wed, 04 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/NarenZW21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/NohK21,
author = {Jiho Noh and
Ramakanth Kavuluru},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Joint learning for biomedical {NER} and entity normalization: encoding
schemes, counterfactual examples, and zero-shot evaluation},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {55:1--55:10},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469533},
doi = {10.1145/3459930.3469533},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/NohK21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/OhDB21,
author = {Lisa Oh and
Bowen Dai and
Chris Bailey{-}Kellogg},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {A multi-resolution graph convolution network for contiguous epitope
prediction},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {38:1--38:10},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469540},
doi = {10.1145/3459930.3469540},
timestamp = {Wed, 04 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/OhDB21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ParkB21,
author = {Gun Woo (Warren) Park and
Kevin Bryson},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {LDEncoder: reference deep learning-based feature detector for transfer
learning in the field of epigenomics},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {58:1},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469487},
doi = {10.1145/3459930.3469487},
timestamp = {Sun, 04 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ParkB21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/PaszekE021,
author = {Jaroslaw Paszek and
Oliver Eulenstein and
Pawel G{\'{o}}recki},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Novel genomic duplication models through integer linear programming},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {16:1--16:11},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469549},
doi = {10.1145/3459930.3469549},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/PaszekE021.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/RiosDHK21,
author = {Anthony Rios and
Eric B. Durbin and
Isaac Hands and
Ramakanth Kavuluru},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Assigning {ICD-O-3} codes to pathology reports using neural multi-task
training with hierarchical regularization},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {32:1--32:10},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469541},
doi = {10.1145/3459930.3469541},
timestamp = {Wed, 04 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/RiosDHK21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/RocheBB21,
author = {Rahmatullah Roche and
Sutanu Bhattacharya and
Debswapna Bhattacharya},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Hybridized distance- and contact- based hierarchical protein structure
modeling using DConStruct},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {62:1},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469491},
doi = {10.1145/3459930.3469491},
timestamp = {Thu, 23 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/RocheBB21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/SafariSZFCL21,
author = {Amir Hosein Safari and
Nafiseh Sedaghat and
Hooman Zabeti and
Alpha Forna and
Leonid Chindelevitch and
Maxwell W. Libbrecht},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Predicting drug resistance in \emph{M. tuberculosis} using a long-term
recurrent convolutional network},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {29:1--29:10},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469534},
doi = {10.1145/3459930.3469534},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/SafariSZFCL21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ShiC21,
author = {Lizhen Shi and
Bo Chen},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {LSHvec: a vector representation of {DNA} sequences using locality
sensitive hashing and FastText word embeddings},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {30:1--30:10},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469521},
doi = {10.1145/3459930.3469521},
timestamp = {Wed, 04 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ShiC21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ShouGSB21,
author = {Xiao Shou and
Tian Gao and
Dharmashankar Subramanian and
Kristin P. Bennett},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Match2: hybrid self-organizing map and deep learning strategies for
treatment effect estimation},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {46:1--46:10},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469532},
doi = {10.1145/3459930.3469532},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ShouGSB21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ShpynovCTA21,
author = {Oleg Shpynov and
Roman Chernyatchik and
Petr Tsurinov and
Maxim N. Artyomov},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {{SPAN} and {JBR:} analysis and visualization toolkit for peak calling},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {69:1},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469498},
doi = {10.1145/3459930.3469498},
timestamp = {Wed, 04 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ShpynovCTA21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ShpynovK21,
author = {Oleg Shpynov and
Nikolai Kapralov},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {PubTrends: a scientific literature explorer},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {72:1},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469501},
doi = {10.1145/3459930.3469501},
timestamp = {Wed, 04 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ShpynovK21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/SongTXLGPVBML21,
author = {Ziyang Song and
Xavier Sumba Toral and
Yixin Xu and
Aihua Liu and
Liming Guo and
Guido Powell and
Aman Verma and
David L. Buckeridge and
Ariane Marelli and
Yue Li},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Supervised multi-specialist topic model with applications on large-scale
electronic health record data},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {6:1--6:26},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469543},
doi = {10.1145/3459930.3469543},
timestamp = {Thu, 23 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/SongTXLGPVBML21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/StroblL21,
author = {Eric V. Strobl and
Thomas A. Lasko},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Synthesized difference in differences},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {45:1--45:10},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469528},
doi = {10.1145/3459930.3469528},
timestamp = {Wed, 04 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/StroblL21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/SuCNFVM21,
author = {Hang Su and
Ziwei Chen and
Maya L. Najarian and
Martin T. Ferris and
Fernando Pardo{-}Manuel de Villena and
Leonard McMillan},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {A \emph{k}-mer query tool for assessing population diversity in pangenomes},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {1:1--1:9},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469537},
doi = {10.1145/3459930.3469537},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/SuCNFVM21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/TianE00WZ0021,
author = {Shubo Tian and
Arslan Erdengasileng and
Xi Yang and
Yi Guo and
Yonghui Wu and
Jinfeng Zhang and
Jiang Bian and
Zhe He},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Transformer-based named entity recognition for parsing clinical trial
eligibility criteria},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {49:1--49:6},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469560},
doi = {10.1145/3459930.3469560},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/TianE00WZ0021.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/TsurinovSLLA21,
author = {Petr Tsurinov and
Oleg Shpynov and
Nina Lukashina and
Daria Likholetova and
Maxim N. Artyomov},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {{FARM:} hierarchical association rule mining and visualization method},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {70:1},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469499},
doi = {10.1145/3459930.3469499},
timestamp = {Wed, 04 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/TsurinovSLLA21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/VashishathB21,
author = {Yashu Vashishath and
Serdar Bozdag},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {{GWAS} analysis to compute genetic markers of progression to Alzheimer's
disease},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {84:1},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3470854},
doi = {10.1145/3459930.3470854},
timestamp = {Wed, 04 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/VashishathB21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WangDTRBW21,
author = {Yibin Wang and
William Neil Duggar and
Toms V. Thomas and
P. Russell Roberts and
Linkan Bian and
Haifeng Wang},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Extracapsular extension identification for head and neck cancer using
multi-scale 3D deep neural network},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {52:1--52:5},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469561},
doi = {10.1145/3459930.3469561},
timestamp = {Mon, 17 Jul 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/WangDTRBW21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WhitfieldLA21,
author = {Christopher Whitfield and
Yang Liu and
Mohd Anwar},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Surveillance of {COVID-19} pandemic using social media: a reddit study
in North Carolina},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {43:1--43:8},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469550},
doi = {10.1145/3459930.3469550},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/WhitfieldLA21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WilliamZ21,
author = {Femi William and
Feng Zhu},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {{CNN} models for eye state classification using {EEG} with temporal
ordering},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {80:1--80:8},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3471160},
doi = {10.1145/3459930.3471160},
timestamp = {Tue, 04 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/WilliamZ21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WuTLL21,
author = {Ye Wu and
Hing{-}Fung Ting and
Tak Wah Lam and
Ruibang Luo},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {BioNumQA-BERT: answering biomedical questions using numerical facts
with a deep language representation model},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {57:1--57:6},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469557},
doi = {10.1145/3459930.3469557},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/WuTLL21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Xie0021,
author = {Zongxing Xie and
Bing Zhou and
Fan Ye},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Signal quality detection towards practical non-touch vital sign monitoring},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {18:1--18:9},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469526},
doi = {10.1145/3459930.3469526},
timestamp = {Wed, 04 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Xie0021.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/XuC21,
author = {Chunrui Xu and
Yang Cao},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {A spatiotemporal model of polarity and spatial gradient establishment
in \emph{caulobacter crescentus}},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {12:1--12:10},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469539},
doi = {10.1145/3459930.3469539},
timestamp = {Wed, 25 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/XuC21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/YeomGBN21,
author = {Jae{-}Seung Yeom and
Konstantia Georgouli and
Robert Blake and
Ali Navid},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Towards dynamic simulation of a whole cell model},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {82:1--82:10},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3471161},
doi = {10.1145/3459930.3471161},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/YeomGBN21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/YiS21,
author = {Haidong Yi and
Natalie Stanley},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {CytoSet: predicting clinical outcomes via set-modeling of cytometry
data},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {47:1--47:8},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469529},
doi = {10.1145/3459930.3469529},
timestamp = {Wed, 04 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/YiS21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/YoonM21,
author = {Garrett Yoon and
Vincent J. Major},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Probing automated treatment of urinary tract infections for bias:
a case-study where machine learning perpetuates structural differences
and racial disparities},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {73:1},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469502},
doi = {10.1145/3459930.3469502},
timestamp = {Wed, 04 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/YoonM21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZareSN21,
author = {Fatima Zare and
Jacob Stark and
Sheida Nabavi},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Copy number variation detection using single cell sequencing data},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {26:1--26:6},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469556},
doi = {10.1145/3459930.3469556},
timestamp = {Wed, 04 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ZareSN21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZengL021,
author = {Xianlong Zeng and
Simon M. Lin and
Chang Liu},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Transformer-based unsupervised patient representation learning based
on medical claims for risk stratification and analysis},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {17:1--17:9},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469519},
doi = {10.1145/3459930.3469519},
timestamp = {Wed, 04 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ZengL021.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZenkovOMCG21,
author = {Viktor Zenkov and
James O'Connor and
Hayley McNamara and
Ian A. Cockburn and
Vitaly V. Ganusov},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Do microscopy imaging frequency and experiment duration impact the
analysis of {T} cell movement?},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {63:1},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469492},
doi = {10.1145/3459930.3469492},
timestamp = {Sun, 04 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ZenkovOMCG21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Zhang0MML21,
author = {Xiaofei Zhang and
Ye Yu and
Chan Hee Mok and
James N. MacLeod and
Jinze Liu},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Gazelle: transcript abundance query against large-scale RNA-seq experiments},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {10:1--10:8},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469548},
doi = {10.1145/3459930.3469548},
timestamp = {Wed, 04 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Zhang0MML21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhangJMCSS21,
author = {Kai Zhang and
Xiaoqian Jiang and
Mahboubeh Madadi and
Luyao Chen and
Sean I. Savitz and
Shayan Shams},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {DBNet: a novel deep learning framework for mechanical ventilation
prediction using electronic health records},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {9:1--9:8},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469551},
doi = {10.1145/3459930.3469551},
timestamp = {Thu, 24 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ZhangJMCSS21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhouKSKK021,
author = {Youjia Zhou and
Methun Kamruzzaman and
Patrick S. Schnable and
Bala Krishnamoorthy and
Ananth Kalyanaraman and
Bei Wang},
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {Pheno-mapper: an interactive toolbox for the visual exploration of
phenomics data},
booktitle = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
pages = {20:1--20:10},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930.3469511},
doi = {10.1145/3459930.3469511},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ZhouKSKK021.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/bcb/2021,
editor = {Hongmei Jiang and
Xiuzhen Huang and
Jiajie Zhang},
title = {{BCB} '21: 12th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Gainesville, Florida,
USA, August 1-4, 2021},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459930},
doi = {10.1145/3459930},
isbn = {978-1-4503-8450-6},
timestamp = {Wed, 04 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/2021.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/0003E020,
author = {Zhong Chen and
Andrea Edwards and
Kun Zhang},
title = {Fusion Lasso and Its Applications to Cancer Subtype and Stage Prediction},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {10:1--10:8},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412461},
doi = {10.1145/3388440.3412461},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/0003E020.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AbdillehAT20,
author = {Kawther Abdilleh and
Boris Aguilar and
J. Ross Thomson},
title = {Multi-omics data integration in the Cloud: Analysis of Statistically
Significant Associations Between Clinical and Molecular Features in
Breast Cancer},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {85:1},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3414917},
doi = {10.1145/3388440.3414917},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/AbdillehAT20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AgarwalEAZDBRL20,
author = {Saloni Agarwal and
Mohamedelfatih Eltigani Osman Abaker and
Xinyi Zhang and
Ovidiu Daescu and
Donald A. Barkauskas and
Erin R. Rudzinski and
Patrick Leavey},
title = {Rhabdomyosarcoma Histology Classification using Ensemble of Deep Learning
Networks},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {24:1--24:10},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412486},
doi = {10.1145/3388440.3412486},
timestamp = {Sat, 19 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/AgarwalEAZDBRL20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AhsenCGGSPB20,
author = {Mehmet Eren Ahsen and
Yoojin Chun and
Alexander Grishin and
Galina Grishina and
Gustavo Stolovitzky and
Gaurav Pandey and
Supinda Bunyavanich},
title = {NeTFactor, a framework for identifying transcriptional regulators
of gene expression-based biomarkers},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {18:1--18:13},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3414207},
doi = {10.1145/3388440.3414207},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/AhsenCGGSPB20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AlamS20,
author = {Fardina Fathmiul Alam and
Amarda Shehu},
title = {Variational Autoencoders for Protein Structure Prediction},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {27:1--27:10},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412471},
doi = {10.1145/3388440.3412471},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/AlamS20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Aluru020,
author = {Chaitanya Aluru and
Mona Singh},
title = {Identifying Evolutionary Origins of Repeat Domains in Protein Families},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {2:1--2:11},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412416},
doi = {10.1145/3388440.3412416},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/Aluru020.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AntoniadiGHHM20,
author = {Anna Antoniadi and
Miriam Galvin and
Mark Heverin and
Orla Hardiman and
Catherine Mooney},
title = {Using Patient Information for the Prediction of Caregiver Burden in
Amyotrophic Lateral Sclerosis},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {71:1},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3414908},
doi = {10.1145/3388440.3414908},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/AntoniadiGHHM20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Arora20,
author = {Bhumika Arora},
title = {Refinement of {G} protein-coupled receptor structure models: Improving
the prediction of loop conformations and the virtual ligand screening
performances},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {87:1},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3414920},
doi = {10.1145/3388440.3414920},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/Arora20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AvdeyevA20,
author = {Pavel Avdeyev and
Max A. Alekseyev},
title = {Linearization of Ancestral Genomes with Duplicated Genes},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {53:1--53:10},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412484},
doi = {10.1145/3388440.3412484},
timestamp = {Thu, 23 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/AvdeyevA20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AyadCP20,
author = {Lorraine A. K. Ayad and
Panagiotis Charalampopoulos and
Solon P. Pissis},
title = {{SMART:} SuperMaximal approximate repeats tool},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {17:1},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3414210},
doi = {10.1145/3388440.3414210},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/AyadCP20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BagheriGVJAO20,
author = {Ayoub Bagheri and
T. Katrien J. Groenhof and
Wouter B. Veldhuis and
Pim A. de Jong and
Folkert W. Asselbergs and
Daniel L. Oberski},
title = {Multimodal Learning for Cardiovascular Risk Prediction using {EHR}
Data},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {78:1},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3414924},
doi = {10.1145/3388440.3414924},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/BagheriGVJAO20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BaileyAAM20,
author = {Dondra Bailey and
Kawther Abdilleh and
Boris Aguilar and
Alexis McClary},
title = {Multi-omics characterization of Microtubule-actin cross linking factor
1 {(MACF1)} using the ISB-Cancer Genomics Cloud},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {76:1},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3414918},
doi = {10.1145/3388440.3414918},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/BaileyAAM20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BanerjeeWWBSA20,
author = {Sagnik Banerjee and
Margaret Woodhouse and
Roger P. Wise and
Priyanka Bhandary and
Taner Z. Sen and
Carson M. Andorf},
title = {{FINDER:} {A} fully automated pipeline to {FIND} accurate gene structures
from proteins and RNA-Seq expression data},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {79:1--79:2},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3414926},
doi = {10.1145/3388440.3414926},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/BanerjeeWWBSA20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BeheraDM20,
author = {Sairam Behera and
Jitender S. Deogun and
Etsuko N. Moriyama},
title = {MinIsoClust: Isoform clustering using minhash and locality sensitive
hashing},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {64:1--64:7},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412424},
doi = {10.1145/3388440.3412424},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/BeheraDM20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BoseB20,
author = {Banabithi Bose and
Serdar Bozdag},
title = {CTDPathSim: Cell line-tumor deconvoluted pathway-based similarity
in the context of precision medicine in cancer},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {7:1--7:10},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412456},
doi = {10.1145/3388440.3412456},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/BoseB20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Caoili20,
author = {Salvador Eugenio C. Caoili},
title = {Beyond B-Cell Epitopes: Curating Positive Data on Antipeptide Paratope
Binding to Support Development of Computational Tools for Vaccine
Design and Other Translational Applications},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {89:1},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3414923},
doi = {10.1145/3388440.3414923},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/Caoili20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/CarmichaelBBBGR20,
author = {Alexander F. B. Carmichael and
Deepayan Bhowmik and
Johanna L. Baily and
Andrew Brownlow and
George J. Gunn and
Aaron Reeves},
title = {Ir-Man: An Information Retrieval Framework for Marine Animal Necropsy
Analysis},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {67:1--67:9},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412417},
doi = {10.1145/3388440.3412417},
timestamp = {Thu, 05 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/CarmichaelBBBGR20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/CarothersGGKLPQ20,
author = {Morgan Carothers and
Joseph Gardi and
Gianluca Gross and
Tatsuki Kuze and
Nuo Liu and
Fiona Plunkett and
Julia Qian and
Yi{-}Chieh Wu},
title = {An Integer Linear Programming Solution for the Most Parsimonious Reconciliation
Problem under the Duplication-Loss-Coalescence Model},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {52:1--52:12},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412474},
doi = {10.1145/3388440.3412474},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/CarothersGGKLPQ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/CarreraDT20,
author = {Iv{\'{a}}n Carrera and
In{\^{e}}s Dutra and
Eduardo Tejera},
title = {Representing Cellular Lines with {SVM} and Text Processing},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {82:1},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3414912},
doi = {10.1145/3388440.3414912},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/CarreraDT20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChenAGWHSC20,
author = {Xiao Chen and
Nasrin Akhter and
Zhiye Guo and
Tianqi Wu and
Jie Hou and
Amarda Shehu and
Jianlin Cheng},
title = {Deep Ranking in Template-free Protein Structure Prediction},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {31:1--31:10},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412469},
doi = {10.1145/3388440.3412469},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ChenAGWHSC20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChenMS20,
author = {Junjie Chen and
Mohammad Erfan Mowlaei and
Xinghua Shi},
title = {Population-scale Genomic Data Augmentation Based on Conditional Generative
Adversarial Networks},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {26:1--26:6},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412475},
doi = {10.1145/3388440.3412475},
timestamp = {Tue, 04 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ChenMS20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/DasK20,
author = {William Das and
Shubh Khanna},
title = {A Novel Pupillometric-Based Application for the Automated Detection
of {ADHD} Using Machine Learning},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {68:1--68:6},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412427},
doi = {10.1145/3388440.3412427},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/DasK20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/DuLHC20,
author = {Yuhui Du and
Bang Li and
Yuliang Hou and
Vince D. Calhoun},
title = {A deep learning fusion model for brain disorder classification: Application
to distinguishing schizophrenia and autism spectrum disorder},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {56:1--56:7},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412478},
doi = {10.1145/3388440.3412478},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/DuLHC20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/DuMMM20,
author = {Yuhan Du and
John Mehegan and
Fionnuala M. McAuliffe and
Catherine Mooney},
title = {Prediction of Large for Gestational Age Infants in Overweight and
Obese Women at Approximately 20 Gestational Weeks},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {81:1},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3414906},
doi = {10.1145/3388440.3414906},
timestamp = {Tue, 29 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/DuMMM20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GanVA20,
author = {Luqin Gan and
Giuseppe Vinci and
Genevera I. Allen},
title = {Correlation Imputation in Single cell RNA-seq using Auxiliary Information
and Ensemble Learning},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {41:1--41:6},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412462},
doi = {10.1145/3388440.3412462},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/GanVA20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GasperCC0B20,
author = {William Gasper and
Kathryn M. Cooper and
Nathan Cornelius and
Hesham Ali and
Sanjukta Bhowmick},
title = {Characterization of S. cerevisiae Protein Complexes by Representative
{DDI} Graph Planarity},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {21:1--21:6},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412465},
doi = {10.1145/3388440.3412465},
timestamp = {Thu, 01 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/GasperCC0B20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GasperCG20,
author = {William Gasper and
Parvathi Chundi and
Dario Ghersi},
title = {MeSH Indexing Using the Biomedical Citation Network},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {49:1--49:8},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412466},
doi = {10.1145/3388440.3412466},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/GasperCG20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GhandikotaJ20,
author = {Sudhir Ghandikota and
Anil G. Jegga},
title = {A multi-context feature learning approach to identify disease-specific
gene neighborhoods},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {25:1--25:6},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412419},
doi = {10.1145/3388440.3412419},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/GhandikotaJ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GiusteVZTZDW20,
author = {Felipe O. Giuste and
Mythreye Venkatesan and
Conan Zhao and
Li Tong and
Yuanda Zhu and
Shriprasad R. Deshpande and
May D. Wang},
title = {Automated Classification of Acute Rejection from Endomyocardial Biopsies},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {6:1--6:9},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412430},
doi = {10.1145/3388440.3412430},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/GiusteVZTZDW20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HakimS20,
author = {Riyad Hakim and
Saeed Salem},
title = {Efficiently mining rich subgraphs from vertex-attributed graphs},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {65:1--65:9},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412423},
doi = {10.1145/3388440.3412423},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/HakimS20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HallmanCP20,
author = {Roger A. Hallman and
Anjali Chikkula and
Temiloluwa Prioleau},
title = {Predicting Criticality in {COVID-19} Patients},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {46:1--46:7},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412463},
doi = {10.1145/3388440.3412463},
timestamp = {Sun, 04 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/HallmanCP20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HaoJCSZ020,
author = {Junheng Hao and
Chelsea J.{-}T. Ju and
Muhao Chen and
Yizhou Sun and
Carlo Zaniolo and
Wei Wang},
title = {Bio-JOIE: Joint Representation Learning of Biological Knowledge Bases},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {42:1--42:10},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412477},
doi = {10.1145/3388440.3412477},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/HaoJCSZ020.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/JazayeriPSY20,
author = {Ali Jazayeri and
Sara Pajouhanfar and
Sadaf Saba and
Christopher C. Yang},
title = {Modularity Analysis of Bipartite Networks and Multivariate {ANOVA}
for Identification of Differentially Expressed Proteins in a Mouse
Model of Down Syndrome},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {3:1--3:8},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412421},
doi = {10.1145/3388440.3412421},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/JazayeriPSY20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/JiangAKTW20,
author = {Yixing Jiang and
Kristen Alford and
Frank Ketchum and
Li Tong and
May D. Wang},
title = {TLSurv: Integrating Multi-Omics Data by Multi-Stage Transfer Learning
for Cancer Survival Prediction},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {23:1--23:10},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412422},
doi = {10.1145/3388440.3412422},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/JiangAKTW20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KosfeldMDHA20,
author = {Tim Kosfeld and
Jonathan McMillan and
Richard J. DiPaolo and
Jie Hou and
Tae{-}Hyuk Ahn},
title = {Performance Evaluation of Viral Infection Diagnosis using T-Cell Receptor
Sequence and Artificial Intelligence},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {35:1--35:10},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412420},
doi = {10.1145/3388440.3412420},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/KosfeldMDHA20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KriegerK20,
author = {Spencer Krieger and
John D. Kececioglu},
title = {Predicting protein secondary structure by an ensemble through feature-based
accuracy estimation},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {29:1--29:10},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412425},
doi = {10.1145/3388440.3412425},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/KriegerK20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KriegerK20a,
author = {Spencer Krieger and
John D. Kececioglu},
title = {Boosting the accuracy of protein secondary structure prediction through
nearest neighbor search and method hybridization},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {30:1},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3414212},
doi = {10.1145/3388440.3414212},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/KriegerK20a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KuangT20,
author = {Mengmeng Kuang and
Hing{-}Fung Ting},
title = {A data-centric pipeline using convolutional neural network to select
better multiple sequence alignment method},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {72:1},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3414909},
doi = {10.1145/3388440.3414909},
timestamp = {Sun, 15 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/KuangT20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LeGrandSTTVALPS20,
author = {Scott LeGrand and
Aaron Scheinberg and
Andreas F. Tillack and
Mathialakan Thavappiragasam and
Josh Vincent Vermaas and
Rupesh Agarwal and
Jeff Larkin and
Duncan Poole and
Diogo Santos{-}Martins and
Leonardo Solis{-}Vasquez and
Andreas Koch and
Stefano Forli and
Oscar R. Hernandez and
Jeremy C. Smith and
Ada Sedova},
title = {GPU-Accelerated Drug Discovery with Docking on the Summit Supercomputer:
Porting, Optimization, and Application to {COVID-19} Research},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {43:1--43:10},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412472},
doi = {10.1145/3388440.3412472},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/LeGrandSTTVALPS20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiNWCOPSB20,
author = {Yue Li and
Pratheeksha Nair and
Zhi Wen and
Imane Chafi and
Anya Okhmatovskaia and
Guido Powell and
Yannan Shen and
David L. Buckeridge},
title = {Global Surveillance of {COVID-19} by mining news media using a multi-source
dynamic embedded topic model},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {34:1--34:14},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412418},
doi = {10.1145/3388440.3412418},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/LiNWCOPSB20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiuZDC20,
author = {Lucas Jing Liu and
Hongwei Zhang and
Jianzhong Di and
Jin Chen},
title = {{ELMV:} an Ensemble-Learning Approach for Analyzing Electrical Health
Records with Significant Missing Values},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {55:1--55:10},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412431},
doi = {10.1145/3388440.3412431},
timestamp = {Tue, 10 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/LiuZDC20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LlabresRV20,
author = {Merc{\`{e}} Llabr{\'{e}}s and
Francesc Rossell{\'{o}} and
Gabriel Valiente},
title = {A Generalized Robinson-Foulds Distance for Clonal Trees, Mutation
Trees, and Phylogenetic Trees and Networks},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {13:1--13:10},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412479},
doi = {10.1145/3388440.3412479},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/LlabresRV20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LuBNCRT20,
author = {Diyuan Lu and
Sebastian Bauer and
Valentin Neubert and
Lara Sophie Costard and
Felix Rosenow and
Jochen Triesch},
title = {Staging Epileptogenesis with Deep Neural Networks},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {60:1--60:10},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412480},
doi = {10.1145/3388440.3412480},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/LuBNCRT20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MitchellBMWKCMK20,
author = {Keith Mitchell and
Jaqueline J. Brito and
Igor Mandric and
Qiaozhen Wu and
Sergey Knyazev and
Sei Chang and
Lana S. Martin and
Aaron Karlsberg and
Ekaterina Gerasimov and
Russell Littman and
Brian L. Hill and
Nicholas C. Wu and
Harry (Taegyun) Yang and
Kevin Hsieh and
Linus Chen and
Eli Littman and
Taylor Shabani and
German Enik and
Douglas Yao and
Ren Sun and
Jan Schroeder and
Eleazar Eskin and
Alex Zelikovsky and
Pavel Skums and
Mihai Pop and
Serghei Mangul},
title = {Benchmarking of computational error-correction methods for next-generation
sequencing data},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {63:1},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3414209},
doi = {10.1145/3388440.3414209},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/MitchellBMWKCMK20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MondalKB20,
author = {Abhijit Mondal and
Misagh Kordi and
Mukul S. Bansal},
title = {A Supervised Machine Learning Approach for Distinguishing Between
Additive and Replacing Horizontal Gene Transfers},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {16:1--16:11},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412428},
doi = {10.1145/3388440.3412428},
timestamp = {Sun, 04 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/MondalKB20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MreyoudA20,
author = {Yassin Mreyoud and
Tae{-}Hyuk Ahn},
title = {Deep Neural Network Modeling for Phenotypic Prediction of Metagenomic
Samples},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {77:1},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3414921},
doi = {10.1145/3388440.3414921},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/MreyoudA20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/NambiarHLMHR20,
author = {Ananthan Nambiar and
Maeve Heflin and
Simon Liu and
Sergei Maslov and
Mark Hopkins and
Anna M. Ritz},
title = {Transforming the Language of Life: Transformer Neural Networks for
Protein Prediction Tasks},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {5:1--5:8},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412467},
doi = {10.1145/3388440.3412467},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/NambiarHLMHR20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/NowlingBEBHD20,
author = {Ronald J. Nowling and
Christopher R. Beal and
Scott J. Emrich and
Susanta K. Behura and
Marc S. Halfon and
Molly Duman{-}Scheel},
title = {PeakMatcher: Matching Peaks Across Genome Assemblies},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {70:1},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3414907},
doi = {10.1145/3388440.3414907},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/NowlingBEBHD20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/NowlingGH20,
author = {Ronald J. Nowling and
Rafael Reple Geromel and
Benjamin Halligan},
title = {Filtering STARR-Seq Peaks for Enhancers with Sequence Models},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {69:1},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3414905},
doi = {10.1145/3388440.3414905},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/NowlingGH20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/OlgunT20,
author = {Gulden Olgun and
{\"{O}}znur Tastan},
title = {Functional Enrichment Analysis of Deregulated Long Non-Coding RNAs
in Cancer Based on their Genomic Neighbors},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {9:1--9:10},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412454},
doi = {10.1145/3388440.3412454},
timestamp = {Sat, 20 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/OlgunT20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/OnianiW20,
author = {David Oniani and
Yanshan Wang},
title = {A Qualitative Evaluation of Language Models on Automatic Question-Answering
for {COVID-19}},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {33:1--33:9},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412413},
doi = {10.1145/3388440.3412413},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/OnianiW20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/OvensEM20,
author = {Katie L. Ovens and
B. Frank Eames and
Ian McQuillan},
title = {The impact of sample size and tissue type on the reproducibility of
gene co-expression networks},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {12:1--12:10},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412481},
doi = {10.1145/3388440.3412481},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/OvensEM20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/PandalaCMNV20,
author = {Niharika Pandala and
Casey A. Cole and
Devaun McFarland and
Anita Nag and
Homayoun Valafar},
title = {A Preliminary Investigation in the Molecular Basis of Host Shutoff
Mechanism in SARS-CoV},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {32:1--32:9},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412483},
doi = {10.1145/3388440.3412483},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/PandalaCMNV20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/PandeyB20,
author = {Akanksha Pandey and
Edward L. Braun},
title = {Protein evolution is structure dependent and non-homogeneous across
the tree of life},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {28:1--28:11},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412473},
doi = {10.1145/3388440.3412473},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/PandeyB20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/PratapaJLB020,
author = {Aditya Pratapa and
Amogh P. Jalihal and
Jeffrey N. Law and
Aditya Bharadwaj and
T. M. Murali},
title = {How to build regulatory networks from single-cell gene expression
data},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {11:1},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3414213},
doi = {10.1145/3388440.3414213},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/PratapaJLB020.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/PreisingFRR20,
author = {Gabriel A. Preising and
Joshua J. Faber{-}Hammond and
Suzy C. P. Renn and
Anna M. Ritz},
title = {A Protein-Protein Interactome for an African Cichlid},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {84:1},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3414916},
doi = {10.1145/3388440.3414916},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/PreisingFRR20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/RastegariOA20,
author = {Elham Rastegari and
Donovan Orn and
Hesham H. Ali},
title = {Smart Computational Approaches with Advanced Feature Selection Algorithms
for Optimizing the Classification of Mobility Data in Health Informatics},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {58:1--58:9},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412426},
doi = {10.1145/3388440.3412426},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/RastegariOA20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/RossettoZ20,
author = {Allison M. Rossetto and
Wenjin Zhou},
title = {{GANDALF:} Peptide Generation for Drug Design using Sequential and
Structural Generative Adversarial Networks},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {45:1--45:10},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412487},
doi = {10.1145/3388440.3412487},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/RossettoZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/RossettoZ20a,
author = {Allison M. Rossetto and
Wenjin Zhou},
title = {Novel Generated Peptides for {COVID-19} Targets},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {86:1},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3414919},
doi = {10.1145/3388440.3414919},
timestamp = {Mon, 16 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/RossettoZ20a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/RouzbehGGA20,
author = {Fatemeh Rouzbeh and
Ananth Grama and
Paul M. Griffin and
Mohammad Adibuzzaman},
title = {Collaborative Cloud Computing Framework for Health Data with Open
Source Technologies},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {48:1--48:10},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412460},
doi = {10.1145/3388440.3412460},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/RouzbehGGA20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/RouzbehGGA20a,
author = {Fatemeh Rouzbeh and
Ananth Grama and
Paul M. Griffin and
Mohammad Adibuzzaman},
title = {A Unified Cloud-Native Architecture For Heterogeneous Data Aggregation
And Computation},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {73:1},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3414911},
doi = {10.1145/3388440.3414911},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/RouzbehGGA20a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/RubelR20,
author = {Tobias Rubel and
Anna M. Ritz},
title = {Augmenting Signaling Pathway Reconstructions},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {1:1--1:10},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412411},
doi = {10.1145/3388440.3412411},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/RubelR20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/RuedaF20,
author = {Luis Rueda and
Nazia Fatima},
title = {iSOM-GSN: An Integrative Approach for Transforming Multi-omic Data
into Gene Similarity Networks via Self-organizing Maps},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {38:1},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3414206},
doi = {10.1145/3388440.3414206},
timestamp = {Thu, 09 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/RuedaF20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/SahaWR20,
author = {Subrata Saha and
Zigeng Wang and
Sanguthevar Rajasekaran},
title = {{HMSC:} a Hybrid Metagenomic Sequence Classification Algorithm},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {19:1--19:6},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412468},
doi = {10.1145/3388440.3412468},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/SahaWR20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/SchreiberDNB20,
author = {Jacob M. Schreiber and
Timothy J. Durham and
William S. Noble and
Jeffrey A. Bilmes},
title = {Avocado: Deep tensor factorization characterizes the human epigenome
via imputation of tens of thousands of functional experiments},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {37:1},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3414215},
doi = {10.1145/3388440.3414215},
timestamp = {Thu, 29 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/SchreiberDNB20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/SchreiberHN20,
author = {Jacob M. Schreiber and
Deepthi Hegde and
William S. Noble},
title = {Zero-shot imputations across species are enabled through joint modeling
of human and mouse epigenomics},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {39:1--39:9},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412412},
doi = {10.1145/3388440.3412412},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/SchreiberHN20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/SharmaLK020,
author = {Ruby Sharma and
Xuye Luo and
Sajal Kumar and
Mingzhou Song},
title = {Three Co-expression Pattern Types across Microbial Transcriptional
Networks of Plankton in Two Oceanic Waters},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {14:1--14:10},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412485},
doi = {10.1145/3388440.3412485},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/SharmaLK020.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ShiTZZW20,
author = {Wenqi Shi and
Li Tong and
Yuchen Zhuang and
Yuanda Zhu and
May D. Wang},
title = {{EXAM:} An Explainable Attention-based Model for {COVID-19} Automatic
Diagnosis},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {36:1--36:6},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412455},
doi = {10.1145/3388440.3412455},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ShiTZZW20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ShimkoFO20,
author = {Tyler C. Shimko and
Polly M. Fordyce and
Yaron Orenstein},
title = {DeCoDe: degenerate codon design for complete protein-coding {DNA}
libraries},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {51:1},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3414211},
doi = {10.1145/3388440.3414211},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ShimkoFO20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/SinghDBRLFDDSDN20,
author = {Ritambhara Singh and
Pinar Demetci and
Giancarlo Bonora and
Vijay Ramani and
Choli Lee and
He Fang and
Zhi{-}jun Duan and
Xinxian Deng and
Jay Shendure and
Christine Disteche and
William Stafford Noble},
title = {Unsupervised manifold alignment for single-cell multi-omics data},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {40:1--40:10},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412410},
doi = {10.1145/3388440.3412410},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/SinghDBRLFDDSDN20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/SmallCK20,
author = {Ellie Small and
Javier Cabrera and
John B. Kostis},
title = {Abstract Mining},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {47:1--47:6},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412476},
doi = {10.1145/3388440.3412476},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/SmallCK20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Su020,
author = {Cui Su and
Jun Pang},
title = {A Dynamics-based Approach for the Target Control of Boolean Networks},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {50:1--50:8},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412464},
doi = {10.1145/3388440.3412464},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/Su020.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/TomasettiEKK20,
author = {Luca Tomasetti and
Kjersti Engan and
Mahdieh Khanmohammadi and
Kathinka D{\ae}hli Kurz},
title = {{CNN} Based Segmentation of Infarcted Regions in Acute Cerebral Stroke
Patients From Computed Tomography Perfusion Imaging},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {59:1--59:8},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412470},
doi = {10.1145/3388440.3412470},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/TomasettiEKK20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/VallianiSATKC20,
author = {Aly A. Valliani and
John T. Schwartz and
Varun Arvind and
Amir Taree and
Jun S. Kim and
Samuel K. Cho},
title = {Multi-Site Assessment of Pediatric Bone Age Using Deep Learning},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {66:1--66:5},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412429},
doi = {10.1145/3388440.3412429},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/VallianiSATKC20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/VargheseCHPAUAA20,
author = {Bino A. Varghese and
Frank Chen and
Darryl Hwang and
Suzanne L. Palmer and
Andre Luis De Castro Abreu and
Osamu Ukimura and
Monish Aron and
Manju Aron and
Inderbir S. Gill and
Vinay A. Duddalwar and
Gaurav Pandey},
title = {Objective risk stratification of prostate cancer using machine learning
and radiomics applied to multiparametric magnetic resonance images},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {22:1--22:10},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3414208},
doi = {10.1145/3388440.3414208},
timestamp = {Wed, 03 Jul 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/VargheseCHPAUAA20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/VijayanGKMM20,
author = {Vipin Vijayan and
Shawn Gu and
Eric T. Krebs and
Lei Meng and
Tijana Milenkovic},
title = {Pairwise Versus Multiple Global Network Alignment},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {4:1},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3414205},
doi = {10.1145/3388440.3414205},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/VijayanGKMM20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WanKFW20,
author = {Shibiao Wan and
Junil Kim and
Yiping Fan and
Kyoung{-}Jae Won},
title = {Processing Millions of Single Cells by {SHARP}},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {62:1},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3414214},
doi = {10.1145/3388440.3414214},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/WanKFW20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WangK020,
author = {Jiandong Wang and
Sajal Kumar and
Mingzhou Song},
title = {Joint Grid Discretization for Biological Pattern Discovery},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {57:1--57:10},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412415},
doi = {10.1145/3388440.3412415},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/WangK020.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WijesekaraLRV20,
author = {Rajitha Yasas Wijesekara and
Ashwin Lahorkar and
Kunal Rathore and
Jayaraman K. Valadi},
title = {RA2Vec: Distributed Representation of Protein Sequences with Reduced
Alphabet Embeddings: RA2Vec: Distributed Representation},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {80:1},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3414925},
doi = {10.1145/3388440.3414925},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/WijesekaraLRV20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WuLLTW20,
author = {Ye Wu and
Ruibang Luo and
Tak Wah Lam and
Hing{-}Fung Ting and
Junwen Wang},
title = {Translocator: local realignment and global remapping enabling accurate
translocation detection using single-molecule sequencing long reads},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {15:1--15:7},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412457},
doi = {10.1145/3388440.3412457},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/WuLLTW20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/YanWYXH20,
author = {Chaochao Yan and
Sheng Wang and
Jinyu Yang and
Tingyang Xu and
Junzhou Huang},
title = {Re-balancing Variational Autoencoder Loss for Molecule Sequence Generation},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {54:1--54:7},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412458},
doi = {10.1145/3388440.3412458},
timestamp = {Sun, 04 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/YanWYXH20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/YangBN20,
author = {Wei Yang and
Jeffrey A. Bilmes and
William Stafford Noble},
title = {Submodular sketches of single-cell RNA-seq measurements},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {61:1--61:6},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412409},
doi = {10.1145/3388440.3412409},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/YangBN20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/YaoCFHLH20,
author = {Hao{-}Ren Yao and
Der{-}Chen Chang and
Ophir Frieder and
Wendy Huang and
I{-}Chia Liang and
Chi{-}Feng Hung},
title = {Cross-Global Attention Graph Kernel Network Prediction of Drug Prescription},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {44:1--44:10},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412459},
doi = {10.1145/3388440.3412459},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/YaoCFHLH20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZacharyG20,
author = {Wayne Zachary and
Hita Gupta},
title = {Comparing Type 2 Diabetes Self-Management Apps Against the Needs of
Low-Income Minority Patients: Is There An Implicit Functionality Bias?},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {83:1},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3414913},
doi = {10.1145/3388440.3414913},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ZacharyG20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZareNWCN20,
author = {Fatima Zare and
Javad Noorbakhsh and
Tianyu Wang and
Jeffrey H. Chuang and
Sheida Nabavi},
title = {Integrative Deep Learning for PanCancer Molecular Subtype Classification
Using Histopathological Images and RNAseq Data},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {8:1--8:8},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412414},
doi = {10.1145/3388440.3412414},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ZareNWCN20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZengR20,
author = {Heyuan Zeng and
Anna M. Ritz},
title = {Graphery: a Biological Network Algorithm Tutorial Webservice},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {75:1},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3414915},
doi = {10.1145/3388440.3414915},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ZengR20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhuangCR20,
author = {Yuan Zhuang and
Kara L. Cerveny and
Anna M. Ritz},
title = {Prefix/Suffix Variation in Retinoic Acid Response Elements},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {74:1},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3414914},
doi = {10.1145/3388440.3414914},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ZhuangCR20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Zrimec20,
author = {Jan Zrimec},
title = {Structural representations of {DNA} regulatory substrates can enhance
sequence-based algorithms by associating functional sequence variants},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {20:1--20:6},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3412482},
doi = {10.1145/3388440.3412482},
timestamp = {Tue, 29 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/Zrimec20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZrimecZ20,
author = {Jan Zrimec and
Aleksej Zelezniak},
title = {Learning the regulatory grammar of {DNA} for gene expression engineering},
booktitle = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
pages = {88:1},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440.3414922},
doi = {10.1145/3388440.3414922},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ZrimecZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/bcb/2020,
title = {{BCB} '20: 11th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, Virtual Event, USA,
September 21-24, 2020},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3388440},
doi = {10.1145/3388440},
isbn = {978-1-4503-7964-9},
timestamp = {Fri, 13 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/2020.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/0005WIKS019,
author = {Fei He and
Duolin Wang and
Yulia Innokenteva and
Olha Kholod and
Dmitriy Shin and
Dong Xu},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Extracting Molecular Entities and Their Interactions from Pathway
Figures Based on Deep Learning},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {397--404},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342187},
doi = {10.1145/3307339.3342187},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/0005WIKS019.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AbdelhafizNAYB19,
author = {Dina Abdelhafiz and
Sheida Nabavi and
Reda Ammar and
Clifford Yang and
Jinbo Bi},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Residual Deep Learning System for Mass Segmentation and Classification
in Mammography},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {475--484},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342157},
doi = {10.1145/3307339.3342157},
timestamp = {Tue, 29 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/AbdelhafizNAYB19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AgapitoL019,
author = {Giuseppe Agapito and
Wes Lloyd and
Mario Cannataro},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {ParBio'19 - 8th Workshop on Parallel and Cloud-based Bioinformatics
and Biomedicine},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {652},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343459},
doi = {10.1145/3307339.3343459},
timestamp = {Sun, 04 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/AgapitoL019.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AlamRS19,
author = {Fardina Fathmiul Alam and
Taseef Rahman and
Amarda Shehu},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Learning Reduced Latent Representations of Protein Structure Data},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {592--597},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343866},
doi = {10.1145/3307339.3343866},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/AlamRS19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AlkhateebFAMR19,
author = {Abed Alkhateeb and
Nazia Fatima and
Govindaraja Atikukke and
Sabeena Misra and
Luis Rueda},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {A Deep Learning Model to Identify a Genomic Signature Driving Sporadic
Colorectal Cancer in Young Adults},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {645},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343481},
doi = {10.1145/3307339.3343481},
timestamp = {Thu, 09 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/AlkhateebFAMR19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Amsy19,
author = {Tarik Elamsy},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Machine Learning Approach for Predicting Metastatic Sites of Prostate
Cancer},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {626},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343477},
doi = {10.1145/3307339.3343477},
timestamp = {Wed, 01 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Amsy19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AqilaM19,
author = {Tasmia Aqila and
Ananda Mohan Mondal},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Pseudotime Based Analysis of Cancer Dynamics},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {544},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343253},
doi = {10.1145/3307339.3343253},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/AqilaM19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AraLSR19,
author = {Lena Ara and
Xiao Luo and
Alan Sawchuk and
Dave Rollins},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Automate the Peripheral Arterial Disease Prediction in Lower Extremity
Arterial Doppler Study using Machine Learning and Neural Networks},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {130--135},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342180},
doi = {10.1145/3307339.3342180},
timestamp = {Fri, 05 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/AraLSR19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AyatiWSMLKC19,
author = {Marzieh Ayati and
Danica Wiredja and
Daniela Schlatzer and
Sean Maxwell and
Ming Li and
Mehmet Koyut{\"{u}}rk and
Mark R. Chance},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {CoPhosK: {A} Method for Comprehensive Kinase Substrate Annotation
using Co-phosphorylation Analysis},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {550},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342621},
doi = {10.1145/3307339.3342621},
timestamp = {Wed, 15 Feb 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/AyatiWSMLKC19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BarshaiO19,
author = {Mira Barshai and
Yaron Orenstein},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Predicting G-Quadruplexes from {DNA} Sequences Using Multi-Kernel
Convolutional Neural Networks},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {357--365},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342133},
doi = {10.1145/3307339.3342133},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/BarshaiO19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BarshaiO19a,
author = {Mira Barshai and
Yaron Orenstein},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Predicting G-quadruplexes from {DNA} Sequences Using Multi-Kernel
Convolutional Neural Networks},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {539},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343259},
doi = {10.1145/3307339.3343259},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/BarshaiO19a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BhattacharyaB19,
author = {Sutanu Bhattacharya and
Debswapna Bhattacharya},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Contact-assisted Protein Threading: An Evolving New Direction},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {536},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343243},
doi = {10.1145/3307339.3343243},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/BhattacharyaB19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BhattacharyaB19a,
author = {Sutanu Bhattacharya and
Debswapna Bhattacharya},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {How Effective is Contact-assisted Protein Threading?},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {553},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342624},
doi = {10.1145/3307339.3342624},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/BhattacharyaB19a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BicherC19,
author = {Devan Bicher and
Brian Y. Chen},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {A Volumetric Survey of Cavities and Electrostatic Patterns in Protein-RNA
Binding Sites},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {611--617},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343869},
doi = {10.1145/3307339.3343869},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/BicherC19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BlankenbergC19,
author = {Daniel J. Blankenberg and
Martin Cech},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {You Wrote It, Now Get It Used: Publishing Your Software with Galaxy
and Bioconda},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {559},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343178},
doi = {10.1145/3307339.3343178},
timestamp = {Fri, 27 Dec 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/BlankenbergC19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Borodovsky19,
author = {Mark Borodovsky},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {New Machine Learning Algorithms for Genome Annotation},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {1},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342128},
doi = {10.1145/3307339.3342128},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Borodovsky19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BoseB19,
author = {Banabithi Bose and
Serdar Bozdag},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {miRDriver: {A} Tool to Infer Copy Number Derived miRNA-Gene Networks
in Cancer},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {366--375},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342172},
doi = {10.1145/3307339.3342172},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/BoseB19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Caoili19,
author = {Salvador Eugenio C. Caoili},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Toward a Sequence-Based Physicochemical Approach to Variable-Length
B-Cell Epitope Prediction for Antipeptide Paratopes Recognizing Flexibly
Disordered Targets: Insights Drawn from Protein Folding Modeled as
Polymer Collapse},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {534},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343242},
doi = {10.1145/3307339.3343242},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Caoili19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChenDKWL19,
author = {Qingyu Chen and
Jingcheng Du and
Sun Kim and
W. John Wilbur and
Zhiyong Lu},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Evaluation of Five Sentence Similarity Models on Electronic Medical
Records},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {533},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343239},
doi = {10.1145/3307339.3343239},
timestamp = {Fri, 03 Jan 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ChenDKWL19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChenH19,
author = {Lin Chen and
Jing He},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {A Histogram-based Outlier Profile for Atomic Structures Derived from
Cryo-Electron Microscopy},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {586--591},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343865},
doi = {10.1145/3307339.3343865},
timestamp = {Fri, 03 Dec 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ChenH19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChenIL19,
author = {Huiyuan Chen and
Sudha K. Iyengar and
Jing Li},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Large-scale Analysis of Drug Combinations by Integrating Multiple
Heterogeneous Information Networks},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {67--76},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342142},
doi = {10.1145/3307339.3342142},
timestamp = {Sat, 11 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ChenIL19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChenS19,
author = {Junjie Chen and
Xinghua Shi},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {A Sparse Convolutional Predictor with Denoising Autoencoders for Phenotype
Prediction},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {217--222},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342179},
doi = {10.1145/3307339.3342179},
timestamp = {Tue, 04 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ChenS19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Cheng19,
author = {Jianlin Cheng},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Introduction to 2019 {ACM-BCB} Highlights Session},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {548},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342619},
doi = {10.1145/3307339.3342619},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Cheng19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Cheng19a,
author = {Jianlin Cheng},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Protein Tertiary Structure Modeling Driven by Deep Learning and Contact
Distance Prediction in {CASP13}},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {551},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342622},
doi = {10.1145/3307339.3342622},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Cheng19a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChoudharyWLW19,
author = {Anirudh Choudhary and
Hang Wu and
Li Tong and
May D. Wang},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Learning to Evaluate Color Similarity for Histopathology Images using
Triplet Networks},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {466--474},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342170},
doi = {10.1145/3307339.3342170},
timestamp = {Sun, 30 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ChoudharyWLW19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/CiccolellaPBV19,
author = {Simone Ciccolella and
Murray D. Patterson and
Paola Bonizzoni and
Gianluca Della Vedova},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Effective Clustering for Single Cell Sequencing Cancer Data},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {437--446},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342149},
doi = {10.1145/3307339.3342149},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/CiccolellaPBV19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ConsulV19,
author = {Shorya Consul and
Haris Vikalo},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Reconstructing Intra-Tumor Heterogeneity via Convex Optimization and
Branch-and-Bound Search},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {524--529},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342178},
doi = {10.1145/3307339.3342178},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ConsulV19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Crespo-CepedaAV19,
author = {Rodrigo Crespo{-}Cepeda and
Giuseppe Agapito and
Jos{\'{e}} Luis V{\'{a}}zquez{-}Poletti and
Mario Cannataro},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Challenges and Opportunities of Amazon Serverless Lambda Services
in Bioinformatics},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {663--668},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343462},
doi = {10.1145/3307339.3343462},
timestamp = {Sun, 04 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Crespo-CepedaAV19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/DeBlasioGKM19,
author = {Dan F. DeBlasio and
Fiyinfoluwa Gbosibo and
Carl Kingsford and
Guillaume Mar{\c{c}}ais},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Practical Universal k-mer Sets for Minimizer Schemes},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {167--176},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342144},
doi = {10.1145/3307339.3342144},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/DeBlasioGKM19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/DissezCPCM19,
author = {Ga{\"{e}}tan Dissez and
Gaia Ceddia and
Pietro Pinoli and
Stefano Ceri and
Marco Masseroli},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Drug Repositioning Predictions by Non-Negative Matrix Tri-Factorization
of Integrated Association Data},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {25--33},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342154},
doi = {10.1145/3307339.3342154},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/DissezCPCM19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/DubeyHCT19,
author = {Abhishek Kumar Dubey and
Jacob D. Hinkle and
James Blair Christian and
Georgia D. Tourassi},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Extraction of Tumor Site from Cancer Pathology Reports using Deep
Filters},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {320--327},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342173},
doi = {10.1145/3307339.3342173},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/DubeyHCT19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/DursunSSSB19,
author = {Cagatay Dursun and
Naoki Shimoyama and
Mary Shimoyama and
Michael Schl{\"{a}}ppi and
Serdar Bozdag},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {PhenoGeneRanker: {A} Tool for Gene Prioritization Using Complete Multiplex
Heterogeneous Networks},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {279--288},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342155},
doi = {10.1145/3307339.3342155},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/DursunSSSB19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ElderW19,
author = {C. Shane Elder and
Catherine E. Welsh},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {MitoMut: An Efficient Approach to Detecting Mitochondrial {DNA} Deletions
from Paired-end Next-generation Sequencing Data},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {177--182},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342158},
doi = {10.1145/3307339.3342158},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ElderW19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ElheshaSCBK19,
author = {Rasha Elhesha and
Aisharjya Sarkar and
Pietro Cinaglia and
Christina Boucher and
Tamer Kahveci},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Co-evolving Patterns in Temporal Networks of Varying Evolution},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {494--503},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342152},
doi = {10.1145/3307339.3342152},
timestamp = {Mon, 10 Jun 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ElheshaSCBK19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ElkinAZ19,
author = {Magdalyn E. Elkin and
Whitney Angelica Andrews and
Xingquan Zhu},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Network Analysis and Recommendation for Infectious Disease Clinical
Trial Research},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {347--356},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342156},
doi = {10.1145/3307339.3342156},
timestamp = {Tue, 18 May 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ElkinAZ19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/EslamiS19,
author = {Taban Eslami and
Fahad Saeed},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Auto-ASD-Network: {A} Technique Based on Deep Learning and Support
Vector Machines for Diagnosing Autism Spectrum Disorder using fMRI
Data},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {646--651},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343482},
doi = {10.1145/3307339.3343482},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/EslamiS19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/FuGXMS19,
author = {Tianfan Fu and
Tian Gao and
Cao Xiao and
Tengfei Ma and
Jimeng Sun},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {{PEARL:} Prototype Learning via Rule Learning},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {223--232},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342159},
doi = {10.1145/3307339.3342159},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/FuGXMS19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/FuGXMS19a,
author = {Tianfan Fu and
Tian Gao and
Cao Xiao and
Tengfei Ma and
Jimeng Sun},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {{PEARL:} Prototype Learning via Rule Learning},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {542},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343250},
doi = {10.1145/3307339.3343250},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/FuGXMS19a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GandhiLSZH019,
author = {Priyanka Gandhi and
Xiao Luo and
Susan Storey and
Zuoyi Zhang and
Zhi Han and
Kun Huang},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Identifying Symptom Clusters in Breast Cancer and Colorectal Cancer
Patients using {EHR} Data},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {405--413},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342164},
doi = {10.1145/3307339.3342164},
timestamp = {Thu, 04 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/GandhiLSZH019.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GeroH19,
author = {Zelalem Gero and
Joyce C. Ho},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {NamedKeys: Unsupervised Keyphrase Extraction for Biomedical Documents},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {328--337},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342147},
doi = {10.1145/3307339.3342147},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/GeroH19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GuoS0K19,
author = {Yue Guo and
Jason L. Stein and
Guorong Wu and
Ashok K. Krishnamurthy},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {SAU-Net: {A} Universal Deep Network for Cell Counting},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {299--306},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342153},
doi = {10.1145/3307339.3342153},
timestamp = {Tue, 13 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/GuoS0K19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GurukarB19,
author = {Saket Gurukar and
Srikanta Bedathur},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Time-series as Background Data for Relating Medical Diagnoses Terms},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {243--252},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342145},
doi = {10.1145/3307339.3342145},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/GurukarB19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Gusfield19,
author = {Dan Gusfield},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Integer Linear Programming in Computational and Systems Biology: Tutorial},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {560},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343179},
doi = {10.1145/3307339.3343179},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Gusfield19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HamzehR19,
author = {Osama Hamzeh and
Luis Rueda},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {A Gene-disease-based Machine Learning Approach to Identify Prostate
Cancer Biomarkers},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {633--638},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343479},
doi = {10.1145/3307339.3343479},
timestamp = {Thu, 09 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/HamzehR19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HassounEGKR19,
author = {Soha Hassoun and
Yasser El{-}Manzalawy and
Georg Gerber and
David Koslicki and
Gail Rosen},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Workshop on Microbiomics, Metagenomics, and Metabolomics},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {618},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343860},
doi = {10.1145/3307339.3343860},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/HassounEGKR19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HosseiniG19,
author = {Seyedroohollah Hosseini and
Xuan Guo},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Deep Convolutional Neural Network for Automated Detection of Mind
Wandering using {EEG} Signals},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {314--319},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342176},
doi = {10.1145/3307339.3342176},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/HosseiniG19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Huang19,
author = {Heng Huang},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Large-Scale Machine Learning Algorithms for Biomedical Data Science},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {4},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342130},
doi = {10.1145/3307339.3342130},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Huang19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HumphreyLNM19,
author = {Marty Humphrey and
Vincent Lin and
Shweta Notani and
Jose Mattos},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Leveraging the Cloud for Intelligent Clinical Data Registries},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {675--682},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343464},
doi = {10.1145/3307339.3343464},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/HumphreyLNM19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/IsmailDM019,
author = {Nur Hafieza Ismail and
Mengnan Du and
Diego Martinez and
Zhe He},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Multivariate Multi-step Deep Learning Time Series Approach in Forecasting
Parkinson's Disease Future Severity Progression},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {383--389},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342185},
doi = {10.1145/3307339.3342185},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/IsmailDM019.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/JammulaA19,
author = {Nagakishore Jammula and
Srinivas Aluru},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {ParRefCom: Parallel Reference-based Compression of Paired-end Genomics
Read Datasets},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {447--456},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342171},
doi = {10.1145/3307339.3342171},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/JammulaA19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/JazayeriCYKCA19,
author = {Ali Jazayeri and
Muge Capan and
Christopher C. Yang and
Farzaneh Khoshnevisan and
Min Chi and
Ryan Arnold},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Network-Based Modeling of Sepsis: Quantification and Evaluation of
Simultaneity of Organ Dysfunctions},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {87--96},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342160},
doi = {10.1145/3307339.3342160},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/JazayeriCYKCA19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/JazayeriCYNMIA19,
author = {Ali Jazayeri and
Muge Capan and
Christopher C. Yang and
Siddhartha Nambiar and
Maria E. Mayorga and
Julie S. Ivy and
Ryan Arnold},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Simulating Uncertainty of Early Warning Scores in Sepsis Detection},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {543},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343252},
doi = {10.1145/3307339.3343252},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/JazayeriCYNMIA19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/JeongKRZL19,
author = {Hyun{-}Hwan Jeong and
Seon Young Kim and
Maxime W. C. Rousseaux and
Huda Y. Zoghbi and
Zhandong Liu},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Beta-Binomial Modeling of {CRISPR} Pooled Screen Data Identifies Target
Genes with Greater Sensitivity and fewer False Negatives},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {552},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342623},
doi = {10.1145/3307339.3342623},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/JeongKRZL19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/JinF19,
author = {Zheming Jin and
Hal Finkel},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Simulation of Random Network of Hodgkin and Huxley Neurons with Exponential
Synaptic Conductances on an {FPGA} Platform},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {653--657},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343460},
doi = {10.1145/3307339.3343460},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/JinF19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KarimCJUBD19,
author = {Md. Rezaul Karim and
Michael Cochez and
Joao Bosco Jares and
Mamtaz Uddin and
Oya Beyan and
Stefan Decker},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Drug-Drug Interaction Prediction Based on Knowledge Graph Embeddings
and Convolutional-LSTM Network},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {113--123},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342161},
doi = {10.1145/3307339.3342161},
timestamp = {Thu, 25 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/KarimCJUBD19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KashfeenFBVM19,
author = {Anwica Kashfeen and
Harper B. Fauni and
Timothy A. Bell and
Fernando Pardo{-}Manuel de Villena and
Leonard McMillan},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {{ELITE:} Efficiently Locating Insertions of Transposable Elements},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {183--189},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342182},
doi = {10.1145/3307339.3342182},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/KashfeenFBVM19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KaushikDMNA19,
author = {Abhinav Kaushik and
Diane Dunham and
Monali Manohar and
Kari C. Nadeau and
Sandra Andorf},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {A Novel Workflow for Semi-supervised Annotation of Cell-type Clusters
in Mass Cytometry Data},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {532},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343238},
doi = {10.1145/3307339.3343238},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/KaushikDMNA19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KhoshghalbvashG19,
author = {Fariba Khoshghalbvash and
Jean X. Gao},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Integrative Feature Ranking by Applying Deep Learning on Multi Source
Genomic Data},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {207--216},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342139},
doi = {10.1145/3307339.3342139},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/KhoshghalbvashG19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KhudyakovMSZ19,
author = {Yury Khudyakov and
Ion I. Mandoiu and
Pavel Skums and
Alexander Zelikovsky},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Workshop on Computational Advances in Molecular Epidemiology},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {561},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343859},
doi = {10.1145/3307339.3343859},
timestamp = {Fri, 27 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/KhudyakovMSZ19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KordiKB19,
author = {Misagh Kordi and
Soumya Kundu and
Mukul S. Bansal},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {On Inferring Additive and Replacing Horizontal Gene Transfers Through
Phylogenetic Reconciliation},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {514--523},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342168},
doi = {10.1145/3307339.3342168},
timestamp = {Sun, 04 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/KordiKB19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LazarsfeldRELC19,
author = {John Lazarsfeld and
Jonathan Rodr{\'{\i}}guez and
Mert Erden and
Yuelin Liu and
Lenore J. Cowen},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Majority Vote Cascading: {A} Semi-Supervised Framework for Improving
Protein Function Prediction},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {51--60},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342135},
doi = {10.1145/3307339.3342135},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/LazarsfeldRELC19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LazarteFR19,
author = {Amy R. Lazarte and
Samuel B. Fey and
Anna M. Ritz},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Modeling Phytoplankton Movement and Fitness in Lakes},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {530},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343236},
doi = {10.1145/3307339.3343236},
timestamp = {Wed, 18 Dec 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/LazarteFR19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Leslie19,
author = {Christina S. Leslie},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Decoding Epigenomic Programs in Immunity and Cancer},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {2--3},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342129},
doi = {10.1145/3307339.3342129},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Leslie19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiNXGCW19,
author = {Zhen Li and
Chongming Ni and
Jinbo Xu and
Xin Gao and
Shuguang Cui and
Sheng Wang},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Transmembrane Topology Identification by Fusing Evolutionary and Co-evolutionary
Information with Cascaded Bidirectional Transformers},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {136--143},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342140},
doi = {10.1145/3307339.3342140},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/LiNXGCW19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiNXGCW19a,
author = {Zhen Li and
Chongming Ni and
Jinbo Xu and
Xin Gao and
Shuguang Cui and
Sheng Wang},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Transmembrane Topology Identification by Fusing Evolutionary and Co-evolutionary
Information with Cascaded Bidirectional Transformers},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {547},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343256},
doi = {10.1145/3307339.3343256},
timestamp = {Mon, 03 May 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/LiNXGCW19a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LuSKCDNSHR019,
author = {Qiuhao Lu and
Nisansa de Silva and
Sabin Kafle and
Jiazhen Cao and
Dejing Dou and
Thien Huu Nguyen and
Prithviraj Sen and
Brent Hailpern and
Berthold Reinwald and
Yunyao Li},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Learning Electronic Health Records through Hyperbolic Embedding of
Medical Ontologies},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {338--346},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342148},
doi = {10.1145/3307339.3342148},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/LuSKCDNSHR019.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LuckettWMHB19,
author = {Patrick Luckett and
Thomas Watts and
Jeffrey Todd McDonald and
Lee M. Hively and
Ryan Benton},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {A Deep Learning Approach to Phase-Space Analysis for Seizure Detection},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {190--196},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342131},
doi = {10.1145/3307339.3342131},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/LuckettWMHB19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Lugo-MartinezDB19,
author = {Jose Lugo{-}Martinez and
J{\"{o}}rn Dengjel and
Ziv Bar{-}Joseph and
Robert F. Murphy},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Integration of Heterogeneous Experimental Data Improves Global Map
of Human Protein Complexes},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {144--153},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342150},
doi = {10.1145/3307339.3342150},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Lugo-MartinezDB19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LymanCCFKB19,
author = {Cole A. Lyman and
Mark J. Clement and
Travis J. A. Craddock and
Mary Fletcher and
Nancy G. Klimas and
Gordon Broderick},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Feedback Regulation of Immune Response to Maximum Exercise in Gulf
War Illness},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {124--129},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342188},
doi = {10.1145/3307339.3342188},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/LymanCCFKB19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MaZ0B19,
author = {Fenglong Ma and
Shiran Zhong and
Jing Gao and
Ling Bian},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Influenza-Like Symptom Prediction by Analyzing Self-Reported Health
Status and Human Mobility Behaviors},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {233--242},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342141},
doi = {10.1145/3307339.3342141},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/MaZ0B19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MadhobiKKLMK19,
author = {Kaniz Fatema Madhobi and
Methun Kamruzzaman and
Ananth Kalyanaraman and
Eric Lofgren and
Rebekah Moehring and
Bala Krishnamoorthy},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {A Visual Analytics Framework for Analysis of Patient Trajectories},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {15--24},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342143},
doi = {10.1145/3307339.3342143},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/MadhobiKKLMK19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MalekiOMRRK19,
author = {Farhad Maleki and
Katie L. Ovens and
Ian McQuillan and
Elham Rezaei and
Alan M. Rosenberg and
Anthony J. Kusalik},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Gene Set Databases: {A} Fountain of Knowledge or a Siren Call?},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {269--278},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342146},
doi = {10.1145/3307339.3342146},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/MalekiOMRRK19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MamunM19,
author = {Abdullah Al Mamun and
Ananda Mohan Mondal},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Long Non-coding {RNA} Based Cancer Classification using Deep Neural
Networks},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {541},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343249},
doi = {10.1145/3307339.3343249},
timestamp = {Thu, 10 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/MamunM19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ManuweeraMKMRC19,
author = {Buwani Manuweera and
Joann Mudge and
Indika Kahanda and
Brendan Mumey and
Thiruvarangan Ramaraj and
Alan M. Cleary},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Poster: Pangenome-Wide Association Studies with Frequented Regions},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {537},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343244},
doi = {10.1145/3307339.3343244},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ManuweeraMKMRC19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ManuweeraMKMRC19a,
author = {Buwani Manuweera and
Joann Mudge and
Indika Kahanda and
Brendan Mumey and
Thiruvarangan Ramaraj and
Alan M. Cleary},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Pangenome-Wide Association Studies with Frequented Regions},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {627--632},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343478},
doi = {10.1145/3307339.3343478},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ManuweeraMKMRC19a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MarkinAVE19,
author = {Alexey Markin and
Tavis K. Anderson and
Venkata Sai Krishna Teja Vadali and
Oliver Eulenstein},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Robinson-Foulds Reticulation Networks},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {77--86},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342151},
doi = {10.1145/3307339.3342151},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/MarkinAVE19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MerSH19,
author = {Arvind Singh Mer and
Petr Smirnov and
Benjamin Haibe{-}Kains},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Machine Learning for Biomarker Discovery in Cancer Pharmacogenomics
Data},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {557},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343176},
doi = {10.1145/3307339.3343176},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/MerSH19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MilanoG019,
author = {Marianna Milano and
Pietro Hiram Guzzi and
Mario Cannataro},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Towards Local Alignment of Multiple Networks: Multi-GLAlign},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {658--662},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343461},
doi = {10.1145/3307339.3343461},
timestamp = {Wed, 19 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/MilanoG019.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/NiuKHLY19,
author = {Xingzhi Niu and
Dimitar Kumanov and
Ling{-}Hong Hung and
Wes Lloyd and
Ka Yee Yeung},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Leveraging Serverless Computing to Improve Performance for Sequence
Comparison},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {683--687},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343465},
doi = {10.1145/3307339.3343465},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/NiuKHLY19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/NoharaMSN19,
author = {Yasunobu Nohara and
Koutarou Matsumoto and
Hidehisa Soejima and
Naoki Nakashima},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Explanation of Machine Learning Models Using Improved Shapley Additive
Explanation},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {546},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343255},
doi = {10.1145/3307339.3343255},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/NoharaMSN19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/OniQ19,
author = {Olatunji Oni and
Sanzheng Qiao},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Model-Agnostic Interpretation of Cancer Classification with Multi-Platform
Genomic Data},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {34--41},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342189},
doi = {10.1145/3307339.3342189},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/OniQ19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/OrtizKWSM19,
author = {Michael Segundo Ortiz and
Heejun Kim and
Mengqian Wang and
Kazuhiro Seki and
Javed Mostafa},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Dynamic Cluster-based Retrieval and Discovery for Biomedical Literature},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {390--396},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342191},
doi = {10.1145/3307339.3342191},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/OrtizKWSM19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Pearson19,
author = {Antony Pearson},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Extracting Structure from Contaminated Symbolic Data},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {556},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343175},
doi = {10.1145/3307339.3343175},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Pearson19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/PengN19,
author = {Bo Peng and
Xia Ning},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Deep Learning for High-Order Drug-Drug Interaction Prediction},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {197--206},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342136},
doi = {10.1145/3307339.3342136},
timestamp = {Wed, 10 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/PengN19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/PerkinsH19,
author = {Patrick Perkins and
Steffen Heber},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Using a Novel Negative Selection Inspired Anomaly Detection Algorithm
to Identify Corrupted Ribo-seq and RNA-seq Samples},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {457--465},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342169},
doi = {10.1145/3307339.3342169},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/PerkinsH19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/PfabS19,
author = {Jonas Pfab and
Dong Si},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Automated Threshold Selection for Cryo-EM Density Maps},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {161--166},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342190},
doi = {10.1145/3307339.3342190},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/PfabS19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/PhamGGPN19,
author = {Huy Quang Pham and
Jurko Guba and
Mousa Gawanmeh and
Lisa A. Porter and
Alioune Ngom},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {A Network-based Machine Learning Approach for Identifying Biomarkers
of Breast Cancer Survivability},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {639--644},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343480},
doi = {10.1145/3307339.3343480},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/PhamGGPN19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ProsperiAJSMO19,
author = {Mattia Prosperi and
Taj Azarian and
Judith A. Johnson and
Marco Salemi and
Franco Milicchio and
Marco Oliva},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Unexpected Predictors of Antibiotic Resistance in Housekeeping Genes
of Staphylococcus Aureus},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {259--268},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342138},
doi = {10.1145/3307339.3342138},
timestamp = {Wed, 06 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ProsperiAJSMO19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/RamaziPSLB19,
author = {Ramin Ramazi and
Christine Perndorfer and
Emily Soriano and
Jean{-}Philippe Laurenceau and
Rahmatollah Beheshti},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Multi-modal Predictive Models of Diabetes Progression},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {253--258},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342177},
doi = {10.1145/3307339.3342177},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/RamaziPSLB19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ReadCHJ19,
author = {Hunter Read and
Dylan Carpenter and
Sam Herr and
Filip Jagodzinski},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {{PETRA:} Protein-ligand Complex Engineering Through Rigidity Analysis},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {568--573},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343862},
doi = {10.1145/3307339.3343862},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ReadCHJ19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/RenSADK19,
author = {Yuanfang Ren and
Aisharjya Sarkar and
Ahmet Ay and
Alin Dobra and
Tamer Kahveci},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Finding Conserved Patterns in Multilayer Networks},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {97--102},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342184},
doi = {10.1145/3307339.3342184},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/RenSADK19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/RossettoZ19,
author = {Allison M. Rossetto and
Wenjin Zhou},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {{GANDALF:} {A} Prototype of a GAN-based Peptide Design Method},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {61--66},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342183},
doi = {10.1145/3307339.3342183},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/RossettoZ19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/SantosBH19,
author = {Hannah De Los Santos and
Kristin P. Bennett and
Jennifer M. Hurley},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {{ENCORE:} {A} Visualization Tool for Insight into Circadian Omics},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {5--14},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342137},
doi = {10.1145/3307339.3342137},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/SantosBH19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Settino0CAM019,
author = {Marzia Settino and
Anna Bernasconi and
Gaia Ceddia and
Giuseppe Agapito and
Marco Masseroli and
Mario Cannataro},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Using GMQL-Web for Querying, Downloading and Integrating Public with
Private Genomic Datasets},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {688--693},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343466},
doi = {10.1145/3307339.3343466},
timestamp = {Sun, 04 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Settino0CAM019.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ShahriRRK19,
author = {Morteza Pourreza Shahri and
Gillian Reynolds and
Mandi Marie Roe and
Indika Kahanda},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {PPPred: Classifying Protein-phenotype Co-mentions Extracted from Biomedical
Literature},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {414--422},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342167},
doi = {10.1145/3307339.3342167},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ShahriRRK19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/SieradzkiML19,
author = {Guinevere Sieradzki and
Sabrina Mierswa and
Jung Lee},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Application of Comparative Biosequence Analysis to Understand Antibiotic
Resistance in Superbug},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {531},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343237},
doi = {10.1145/3307339.3343237},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/SieradzkiML19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/TagliamonteWPM19,
author = {Massimiliano S. Tagliamonte and
Sheldon G. Waugh and
Mattia Prosperi and
Volker Mai},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {An Integrated Approach for Efficient Multi-Omics Joint Analysis},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {619--625},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343476},
doi = {10.1145/3307339.3343476},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/TagliamonteWPM19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/TanvirMM19,
author = {Raihanul Bari Tanvir and
Mona Maharjan and
Ananda Mohan Mondal},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Community Based Cancer Biomarker Identification from Gene Co-expression
Network},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {545},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343254},
doi = {10.1145/3307339.3343254},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/TanvirMM19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Tillquist19,
author = {Richard C. Tillquist},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Low-Dimensional Representation of Biological Sequence Data},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {555},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343174},
doi = {10.1145/3307339.3343174},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Tillquist19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/TillquistL19,
author = {Richard C. Tillquist and
Manuel E. Lladser},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Low-Dimensional Representation of Genomic Sequences},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {549},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342620},
doi = {10.1145/3307339.3342620},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/TillquistL19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/VajdiJH19,
author = {Amir Vajdi and
Arpita Joshi and
Nurit Haspel},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Integrating Co-Evolutionary Information in Monte Carlo Based Method
for Proteins Trajectory Simulation},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {598--603},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343867},
doi = {10.1145/3307339.3343867},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/VajdiJH19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/VeltriM19,
author = {Daniel Veltri and
Kevin Molloy},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Employing Deep Learning to Study Biomolecules},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {554},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343173},
doi = {10.1145/3307339.3343173},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/VeltriM19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/VizcarraPTGW19,
author = {Juan Carlos Vizcarra and
Ryan Place and
Li Tong and
David A. Gutman and
May Dongmei Wang},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Fusion In Breast Cancer Histology Classification},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {485--493},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342166},
doi = {10.1145/3307339.3342166},
timestamp = {Wed, 26 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/VizcarraPTGW19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WangC19,
author = {Jinbu Wang and
Brian Y. Chen},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {On Conformations of Peptides Bound to Class {I} Major Histocompatibility
Complexes},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {604--610},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343868},
doi = {10.1145/3307339.3343868},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/WangC19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WangGWSH19,
author = {Sheng Wang and
Yuzhi Guo and
Yuhong Wang and
Hongmao Sun and
Junzhou Huang},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {{SMILES-BERT:} Large Scale Unsupervised Pre-Training for Molecular
Property Prediction},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {429--436},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342186},
doi = {10.1145/3307339.3342186},
timestamp = {Tue, 23 Jul 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/WangGWSH19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WangLLW19,
author = {Fei Wang and
Xiujuan Lei and
Bo Liao and
Fang{-}Xiang Wu},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Human Protein Complex Signatures for Drug Repositioning},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {42--50},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342132},
doi = {10.1145/3307339.3342132},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/WangLLW19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WangW19,
author = {May D. Wang and
Hang Wu},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Tutorial: Causal Inference in Biomedical Data Analytics - Basics and
Recent Advances},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {558},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343177},
doi = {10.1145/3307339.3343177},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/WangW19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WeiALL19,
author = {Chih{-}Hsuan Wei and
Alexis Allot and
Robert Leaman and
Zhiyong Lu},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {A Text-Mining System for Concept Annotation in Biomedical Full Text
Articles},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {540},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343246},
doi = {10.1145/3307339.3343246},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/WeiALL19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WeiLLL19,
author = {Chih{-}Hsuan Wei and
Kyubum Lee and
Robert Leaman and
Zhiyong Lu},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Biomedical Mention Disambiguation using a Deep Learning Approach},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {307--313},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342162},
doi = {10.1145/3307339.3342162},
timestamp = {Sun, 25 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/WeiLLL19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WestDMRVJ19,
author = {Elizabeth West and
Kyle Daling and
Courtney Miller and
Wes Rosales and
Sasa Vukovic and
Filip Jagodzinski},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {{CONSEQUENCES:} CONstrained {SEQUENCE} alignmentS With Multiple User
Weights},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {574--579},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343863},
doi = {10.1145/3307339.3343863},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/WestDMRVJ19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WuRD19,
author = {Chao{-}Jung Wu and
Amine M. Remita and
Abdoulaye Banir{\'{e}} Diallo},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {MirLibSpark: {A} Scalable {NGS} Plant MicroRNA Prediction Pipeline
for Multi-Library Functional Annotation},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {669--674},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343463},
doi = {10.1145/3307339.3343463},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/WuRD19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WuyunVKML19,
author = {Qiqige Wuyun and
Nicholas W. VanKuren and
Marcus Kronforst and
Sean P. Mullen and
Kevin J. Liu},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Scalable Statistical Introgression Mapping Using Approximate Coalescent-Based
Inference},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {504--513},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342165},
doi = {10.1145/3307339.3342165},
timestamp = {Sun, 04 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/WuyunVKML19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WuyunVKML19a,
author = {Qiqige Wuyun and
Nicholas W. VanKuren and
Marcus Kronforst and
Sean P. Mullen and
Kevin J. Liu},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Scalable Statistical Introgression Mapping Using Approximate Coalescent-Based
Inference},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {535},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343352},
doi = {10.1145/3307339.3343352},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/WuyunVKML19a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/XuHW19,
author = {Moran Xu and
Dianlin Hu and
Weiwen Wu},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {{\(\mathscr{l}\)}0DL: Joint Image Gradient {\(\mathscr{l}\)}0-norm
With Dictionary Learning for Limited-angle {CT}},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {538},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343245},
doi = {10.1145/3307339.3343245},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/XuHW19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/YaoCFHL19,
author = {Hao{-}Ren Yao and
Der{-}Chen Chang and
Ophir Frieder and
Wendy Huang and
Tian{-}Shyug Lee},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Multiple Graph Kernel Fusion Prediction of Drug Prescription},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {103--112},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342134},
doi = {10.1145/3307339.3342134},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/YaoCFHL19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/YaoCRP19,
author = {Hua{-}Ting Yao and
C{\'{e}}dric Chauve and
Mireille R{\'{e}}gnier and
Yann Ponty},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Exponentially Few {RNA} Structures are Designable},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {289--298},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342163},
doi = {10.1145/3307339.3342163},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/YaoCRP19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/YurovskyFS19,
author = {Alisa Yurovsky and
Bruce Futcher and
Steven Skiena},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Pre-Phaser: Precise Cell-Cycle Phase Detector for scRNA-seq},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {376--382},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342174},
doi = {10.1145/3307339.3342174},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/YurovskyFS19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZamanKDS19,
author = {Ahmed Bin Zaman and
Parastoo Kamranfar and
Carlotta Domeniconi and
Amarda Shehu},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Decoy Ensemble Reduction in Template-free Protein Structure Prediction},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {562--567},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343861},
doi = {10.1145/3307339.3343861},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ZamanKDS19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZamanPS19,
author = {Ahmed Bin Zaman and
Prasanna Venkatesh Parthasarathy and
Amarda Shehu},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Using Sequence-Predicted Contacts to Guide Template-free Protein Structure
Prediction},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {154--160},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342175},
doi = {10.1145/3307339.3342175},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ZamanPS19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZareN19,
author = {Fatima Zare and
Sheida Nabavi},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Copy Number Variation Detection Using Total Variation},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {423--428},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3342181},
doi = {10.1145/3307339.3342181},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ZareN19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhaoG19,
author = {Zhenni Zhao and
Xinqi Gong},
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Trimer Protein-Protein Complex Interface Interacting Residue Pairs
Prediction Using Deep Learning Approach},
booktitle = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
pages = {580--585},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3307339.3343864},
doi = {10.1145/3307339.3343864},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ZhaoG19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/bcb/2019,
editor = {Xinghua Mindy Shi and
Michael Buck and
Jian Ma and
Pierangelo Veltri},
title = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
Computational Biology and Health Informatics, {BCB} 2019, Niagara
Falls, NY, USA, September 7-10, 2019},
publisher = {{ACM}},
year = {2019},
url = {https://dl.acm.org/citation.cfm?id=3307339},
isbn = {978-1-4503-6666-3},
timestamp = {Wed, 18 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/2019.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/0001CMTKRMMR18,
author = {Guo{-}Qiang Zhang and
Licong Cui and
Remo Mueller and
Shiqiang Tao and
Matthew Kim and
Michael Rueschman and
Sara Mariani and
Daniel R. Mobley and
Susan Redline},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {The National Sleep Research Resource: Towards a Sleep Data Commons},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {572},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233725},
doi = {10.1145/3233547.3233725},
timestamp = {Mon, 10 Jun 2024 20:41:10 +0200},
biburl = {https://dblp.org/rec/conf/bcb/0001CMTKRMMR18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AbbasLBHE18,
author = {Mostafa M. Abbas and
Thanh Le and
Halima Bensmail and
Vasant G. Honavar and
Yasser El{-}Manzalawy},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Microbiomarkers Discovery in Inflammatory Bowel Diseases using Network-Based
Feature Selection},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {172--177},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233602},
doi = {10.1145/3233547.3233602},
timestamp = {Tue, 06 Aug 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/AbbasLBHE18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Agapito018,
author = {Giuseppe Agapito and
Mario Cannataro},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Services4SNPs: {A} RESTful Platform for Association Rule Mining and
Survival Analysis of Genotyping Data},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {517},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233626},
doi = {10.1145/3233547.3233626},
timestamp = {Sun, 04 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Agapito018.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AgapitoL18,
author = {Giuseppe Agapito and
Wes Lloyd},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {{ACM-BCB} 2018 ParBio Chairs' Welcome {\&} Organization},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {687--688},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233727},
doi = {10.1145/3233547.3233727},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/AgapitoL18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AhmadET18,
author = {Muhammad Aurangzeb Ahmad and
Carly Eckert and
Ankur Teredesai},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Interpretable Machine Learning in Healthcare},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {559--560},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233667},
doi = {10.1145/3233547.3233667},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/AhmadET18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AhmadianT018,
author = {Mansooreh Ahmadian and
John J. Tyson and
Yang Cao},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {A Stochastic Model of Size Control in the Budding Yeast Cell Cycle},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {589--590},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233685},
doi = {10.1145/3233547.3233685},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/AhmadianT018.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AlapatiB18,
author = {Rahul Alapati and
Debswapna Bhattacharya},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {clustQ: Efficient Protein Decoy Clustering Using Superposition-free
Weighted Internal Distance Comparisons},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {307--314},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233570},
doi = {10.1145/3233547.3233570},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/AlapatiB18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AllenTX18,
author = {Daniel R. Allen and
Sharma V. Thankachan and
Bojian Xu},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {A Practical and Efficient Algorithm for the k-mismatch Shortest Unique
Substring Finding Problem},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {428--437},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233564},
doi = {10.1145/3233547.3233564},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/AllenTX18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AlmsnedGBKBS18,
author = {Fahad Almsned and
Gideon Gogovi and
Nicole Bracci and
Kylene Kehn{-}Hall and
Estela Blaisten{-}Barojas and
Amarda Shehu},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Modeling the Tertiary Structure of a Multi-domain Protein: Structure
Prediction of Multi-domain Proteins},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {615--620},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233702},
doi = {10.1145/3233547.3233702},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/AlmsnedGBKBS18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AlokshiyaSA18,
author = {Mohammed Alokshiya and
Saeed Salem and
Fidaa Abed},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {A Linear Delay Linear Space Algorithm for Enumeration of All Connected
Induced Subgraphs},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {607},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233695},
doi = {10.1145/3233547.3233695},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/AlokshiyaSA18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AminYTS18,
author = {Mohammad Ruhul Amin and
Alisa Yurovsky and
Yingtao Tian and
Steven Skiena},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {DeepAnnotator: Genome Annotation with Deep Learning},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {254--259},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233577},
doi = {10.1145/3233547.3233577},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/AminYTS18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AndorfMCGMGN18,
author = {Sandra Andorf and
Monali Manohar and
R. Sharon Chinthrajah and
Sheena Gupta and
Holden T. Maecker and
Stephen J. Galli and
Kari C. Nadeau},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Determination of Immunophenotypic Changes by CyTOF, Epigenetics and
Component Resolved Diagnostics During Successful Desensitization in
Multi-food Oral Immunotherapy},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {536},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233644},
doi = {10.1145/3233547.3233644},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/AndorfMCGMGN18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AntunesDMLK18,
author = {Dinler A. Antunes and
Didier Devaurs and
Mark Moll and
Gregory Liz{\'{e}}e and
Lydia E. Kavraki},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {General Prediction of Peptide-MHC Binding Modes Using Incremental
Docking: {A} Proof of Concept},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {568},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233719},
doi = {10.1145/3233547.3233719},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/AntunesDMLK18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ArachchilageP18,
author = {Madara Hetti Arachchilage and
Helen Piontkivska},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Coevolutionary Patterns in {HIV-1} Pre-integration Complex Offer Insights
into Protein Structural Constraints},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {545},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233653},
doi = {10.1145/3233547.3233653},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ArachchilageP18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ArslanturkD18,
author = {Suzan Arslanturk and
Sorin Draghici},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Disease Subtyping using Somatic Variant Data},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {277--282},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233565},
doi = {10.1145/3233547.3233565},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ArslanturkD18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AshishB18,
author = {Naveen Ashish and
Mi{-}Youn K. Brusniak},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Automated Mouse Organ Segmentation: {A} Deep Learning Based Solution},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {236--243},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233552},
doi = {10.1145/3233547.3233552},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/AshishB18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AvdeyevJA18,
author = {Pavel Avdeyev and
Shuai Jiang and
Max A. Alekseyev},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Implicit Transpositions in {DCJ} Scenarios},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {571},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233724},
doi = {10.1145/3233547.3233724},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/AvdeyevJA18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AvramovS18,
author = {Todor K. Avramov and
Dong Si},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Deep Learning for Resolution Validation of Three Dimensional Cryo-Electron
Microscopy Density Maps},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {669--674},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233712},
doi = {10.1145/3233547.3233712},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/AvramovS18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BarryMNSFMH18,
author = {Joseph D. Barry and
Svetlana Shulga Morskaya and
Tuyen Nguyen and
Sarah Solomon and
Kevin Fitzgerald and
Stuart Milstein and
Greg Hinkle},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {RNA-Seq Dose Response Experiments for Quantification of Off-Target
Effects with RNAi Therapeutics},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {547},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233656},
doi = {10.1145/3233547.3233656},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/BarryMNSFMH18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BarrySTG18,
author = {Justin Barry and
Srivathsan Srinivasagopalan and
Sharma V. Thankachan and
Varadraj Prabhu Gurupur},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Diagnosing Schizophrenia: {A} Deep Learning Approach},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {549},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233658},
doi = {10.1145/3233547.3233658},
timestamp = {Thu, 02 Apr 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/BarrySTG18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BasitKW18,
author = {Mujeeb A. Basit and
Vaishnavi Kannan and
DuWayne L. Willett},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Agile Clinical Decision Support Development and Implementation},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {555},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233663},
doi = {10.1145/3233547.3233663},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/BasitKW18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BeheraGDV18,
author = {Sairam Behera and
Sutanu Gayen and
Jitender S. Deogun and
N. V. Vinodchandran},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {KmerEstimate: {A} Streaming Algorithm for Estimating k-mer Counts
with Optimal Space Usage},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {438--447},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233587},
doi = {10.1145/3233547.3233587},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/BeheraGDV18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BernKAR18,
author = {Miriam Bern and
Alexander King and
Derek A. Applewhite and
Anna M. Ritz},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Network-Based Prediction of Polygenic Disease Genes Involved in Cell
Motility: Extended Abstract},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {610--611},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233697},
doi = {10.1145/3233547.3233697},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/BernKAR18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BhattacharyaJS18,
author = {Moumita Bhattacharya and
Claudine Jurkovitz and
Hagit Shatkay},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Co-occurrence of Medical Conditions: Exposing Patterns Through Probabilistic
Topic Modeling},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {570},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233723},
doi = {10.1145/3233547.3233723},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/BhattacharyaJS18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BolukiDQD18,
author = {Shahin Boluki and
Siamak Zamani Dadaneh and
Xiaoning Qian and
Edward R. Dougherty},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Optimal Clustering with Missing Values},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {593--594},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233687},
doi = {10.1145/3233547.3233687},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/BolukiDQD18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Caoili18,
author = {Salvador Eugenio C. Caoili},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Interpreting Negative Data on Antipeptide Paratope Binding to Support
Development of B-Cell Epitope Prediction for Vaccine Design and Other
Translational Applications},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {518},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233627},
doi = {10.1145/3233547.3233627},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/Caoili18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChallaLLZSHP18,
author = {Anup P. Challa and
Robert R. Lavieri and
Judith T. Lewis and
Nicole M. Zaleski and
Jana K. Shirey{-}Rice and
Paul A. Harris and
Jill M. Pulley},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Systematically Prioritizing Targets in Genome-Based Drug Repurposing},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {543},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233651},
doi = {10.1145/3233547.3233651},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ChallaLLZSHP18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Chen018,
author = {Minghan Chen and
Yang Cao},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Analysis and Remedy of Negativity Problem in Hybrid Stochastic Simulation
Algorithm and its Application: Extended Abstract},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {585--586},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233683},
doi = {10.1145/3233547.3233683},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/Chen018.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChenCARFRP18,
author = {Ye Chen and
Ryan D. Calvert and
Ariful Azad and
Bartek Rajwa and
James Fleet and
Timothy Ratliff and
Alex Pothen},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Phenotyping Immune Cells in Tumor and Healthy Tissue Using Flow Cytometry
Data},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {73--78},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233583},
doi = {10.1145/3233547.3233583},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ChenCARFRP18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChenCRGWHWAZM18,
author = {Chuming Chen and
Julie E. Cowart and
Jia Ren and
Sachin Gavali and
Yuqi Wang and
Hongzhan Huang and
Cathy H. Wu and
Leslie Arminski and
Jian Zhang and
Peter B. McGarvey},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Cloud-based Semantic Integration and Knowledge Discovery Systems in
Precision Medicine},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {542},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233650},
doi = {10.1145/3233547.3233650},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ChenCRGWHWAZM18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChenH18,
author = {Lin Chen and
Jing He},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Using Combined Features to Analyze Atomic Structures derived from
Cryo-EM Density Maps},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {651--655},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233709},
doi = {10.1145/3233547.3233709},
timestamp = {Tue, 28 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ChenH18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChenJJL18,
author = {Xuhui Chen and
Jinlong Ji and
Tianxi Ji and
Pan Li},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Cost-Sensitive Deep Active Learning for Epileptic Seizure Detection},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {226--235},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233566},
doi = {10.1145/3233547.3233566},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ChenJJL18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChenKWL18,
author = {Qingyu Chen and
Sun Kim and
W. John Wilbur and
Zhiyong Lu},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Sentence Similarity Measures Revisited: Ranking Sentences in PubMed
Documents},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {531--532},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233640},
doi = {10.1145/3233547.3233640},
timestamp = {Fri, 03 Jan 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ChenKWL18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChenRLLNAL18,
author = {David Chen and
Steve Rust and
En{-}Ju D. Lin and
Simon M. Lin and
Leslie Nelson and
Lindsay Alfano and
Linda P. Lowes},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Prediction of Clinical Outcomes of Spinal Muscular Atrophy Using Motion
Tracking Data and Elastic Net Regression},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {474--481},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233572},
doi = {10.1145/3233547.3233572},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ChenRLLNAL18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChoiKOYPYY18,
author = {Hyun{-}Soo Choi and
Siwon Kim and
Jung Eun Oh and
Jee Eun Yoon and
Jung Ah Park and
Chang{-}Ho Yun and
Sungroh Yoon},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {XGBoost-Based Instantaneous Drowsiness Detection Framework Using Multitaper
Spectral Information of Electroencephalography},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {111--121},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233567},
doi = {10.1145/3233547.3233567},
timestamp = {Fri, 27 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ChoiKOYPYY18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChowAEK18,
author = {Kevin Chow and
Ahmet Ay and
Rasha Elhesha and
Tamer Kahveci},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {{ANCA:} Alignment-based Network Construction Algorithm},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {21--26},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233576},
doi = {10.1145/3233547.3233576},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ChowAEK18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/CowenJ18,
author = {Lenore Cowen and
Xiaoqian Jiang},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Highlights Talks at {ACM} {BCB} 2018},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {564},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233715},
doi = {10.1145/3233547.3233715},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/CowenJ18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/DaDYC18,
author = {Ting Da and
Jianzhong Ding and
Liang Yang and
Gregory S. Chirikjian},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {A Method for Fully Automated Particle Picking in Cryo-Electron Microscopy
Based on a {CNN}},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {633--638},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233706},
doi = {10.1145/3233547.3233706},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/DaDYC18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Denny18,
author = {Joshua C. Denny},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Huge Cohorts, Genomics, and Clinical Data to Personalize Medicine},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {562},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233608},
doi = {10.1145/3233547.3233608},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/Denny18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/DesaiMKSREY18,
author = {Ishika C. Desai and
William Miller and
Vamsi K. Kodali and
Girija Syamlal and
Jenny R. Roberts and
Aaron D. Erdely and
Naveena Yanamala},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Classification of Carbonaceous Nanomaterials based on Patterns of
Inflammatory Markers in {BAL} Fluid and Pathological Outcomes in Lungs},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {505},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233616},
doi = {10.1145/3233547.3233616},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/DesaiMKSREY18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/DhuliawalaFGD18,
author = {Murtaza Dhuliawala and
Nicholas Fay and
Daniel M. Gruen and
Amar K. Das},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {What Happens When?: Interpreting Schedule of Activity Tables in Clinical
Trial Documents},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {301--306},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233578},
doi = {10.1145/3233547.3233578},
timestamp = {Mon, 02 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/DhuliawalaFGD18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/DuDJS18,
author = {Wei Du and
Kristin Dickinson and
Calvin A. Johnson and
Leorey N. Saligan},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Identifying Genes to Predict Cancer Radiotherapy-Related Fatigue with
Machine-Learning Methods},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {527},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233636},
doi = {10.1145/3233547.3233636},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/DuDJS18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/DuN18,
author = {Peng Du and
Luay Nakhleh},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Species Tree and Reconciliation Estimation under a Duplication-Loss-Coalescence
Model},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {376--385},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233600},
doi = {10.1145/3233547.3233600},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/DuN18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/DyerD18,
author = {Matthew Dyer and
Julian Dymacek},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {A Distributed Constrained Non-negative Matrix Factorization Algorithm
for Time-Series Gene Expression Data},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {97--102},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233579},
doi = {10.1145/3233547.3233579},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/DyerD18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ElheshaSBK18,
author = {Rasha Elhesha and
Aisharjya Sarkar and
Christina Boucher and
Tamer Kahveci},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Identification of Co-evolving Temporal Networks},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {591--592},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233686},
doi = {10.1145/3233547.3233686},
timestamp = {Mon, 10 Jun 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ElheshaSBK18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ElmansyK18,
author = {Dalia Elmansy and
Mehmet Koyut{\"{u}}rk},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Cross-Population Analysis for Functional Characterization of Type
{II} Diabetes Variants},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {595},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233688},
doi = {10.1145/3233547.3233688},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ElmansyK18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/EstradaBCRCWDT18,
author = {Trilce Estrada and
Jeremy Benson and
Hector Carrillo{-}Cabada and
Asghar M. Razavi and
Michel A. Cuendet and
Harel Weinstein and
Ewa Deelman and
Michela Taufer},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Graphic Encoding of Macromolecules for Efficient High-Throughput Analysis},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {315--324},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233607},
doi = {10.1145/3233547.3233607},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/EstradaBCRCWDT18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/FalvoSLC018,
author = {Valentina Falvo and
Mariagrazia Scalise and
Francesco Lupia and
Pierfrancesco Casella and
Mario Cannataro},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {A Cooperative Vehicle Routing Platform for Logistic Management in
Healthcare},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {689--692},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233728},
doi = {10.1145/3233547.3233728},
timestamp = {Wed, 19 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/FalvoSLC018.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/FanSCG18,
author = {Ziling Fan and
Luca Soldaini and
Arman Cohan and
Nazli Goharian},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Relation Extraction for Protein-protein Interactions Affected by Mutations},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {506--507},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233617},
doi = {10.1145/3233547.3233617},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/FanSCG18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Gallagher18,
author = {Carla J. Gallagher},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Use of the Informatics for Integrating Biology and the Bedside (i2b2)
Population to Test Serum Bilirubin Levels and Risk for Inflammatory
Bowl Diseases and the Involvement of Uridine Glucuronosyltransferase
Genes},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {529},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233638},
doi = {10.1145/3233547.3233638},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/Gallagher18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GavaliCCRW18,
author = {Sachin Gavali and
Julie Cowart and
Chuming Chen and
Karen Ross and
Cathy H. Wu},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {RESTful {API} for iPTMnet: An Integrated Resource for Protein Post-translational
Modification Network Discovery},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {541},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233649},
doi = {10.1145/3233547.3233649},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/GavaliCCRW18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GongSP18,
author = {Yuan Gong and
Kevin Shin and
Christian Poellabauer},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Improving {LIWC} Using Soft Word Matching},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {523},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233632},
doi = {10.1145/3233547.3233632},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/GongSP18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GongYPSL18,
author = {Yuan Gong and
Hasini Yatawatte and
Christian Poellabauer and
Sandra L. Schneider and
Susan Latham},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Automatic Autism Spectrum Disorder Detection Using Everyday Vocalizations
Captured by Smart Devices},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {465--473},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233574},
doi = {10.1145/3233547.3233574},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/GongYPSL18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GovekSO18,
author = {Kiya Govek and
Camden Sikes and
Layla Oesper},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {A Consensus Approach to Infer Tumor Evolutionary Histories},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {63--72},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233584},
doi = {10.1145/3233547.3233584},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/GovekSO18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GriffinW18,
author = {Madeline P. Griffin and
Catherine E. Welsh},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Comparative Analysis of Tools for Predicting the Functional Impact
of mtDNA Variants},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {535},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233643},
doi = {10.1145/3233547.3233643},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/GriffinW18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GuT18,
author = {Austin Gu and
Casey Overby Taylor},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Differences in Engagement Among BabyCenter.com Community Forum Contributors:
{A} Pilot Study},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {513},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233621},
doi = {10.1145/3233547.3233621},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/GuT18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GundersonJ18,
author = {Sarah Gunderson and
Filip Jagodzinski},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Ensemble Voting Schemes that Improve Machine Learning Models for Predicting
the Effects of Protein Mutations},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {211--219},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233606},
doi = {10.1145/3233547.3233606},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/GundersonJ18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HaasMGM18,
author = {Kyle Haas and
Malika Mahoui and
Simone Gupta and
Stuart Morton},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Leveraging Treatment Patterns to Predict Survival of Patients with
Advanced Non-Small-Cell Lung Cancer},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {283--290},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233562},
doi = {10.1145/3233547.3233562},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/HaasMGM18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HaasMGM18a,
author = {Kyle Haas and
Malika Mahoui and
Simone Gupta and
Stuart Morton},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Using Similarity Metrics on Real World Data to Recommend the Next
Treatment},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {539},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233647},
doi = {10.1145/3233547.3233647},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/HaasMGM18a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HajiramezanaliI18,
author = {Ehsan Hajiramezanali and
Mahdi Imani and
Ulisses M. Braga{-}Neto and
Xiaoning Qian and
Edward R. Dougherty},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Scalable Optimal Bayesian Classification of Single-Cell Trajectories
under Regulatory Model Uncertainty},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {596--597},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233689},
doi = {10.1145/3233547.3233689},
timestamp = {Fri, 24 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/HajiramezanaliI18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HaslamZL018,
author = {Devin Haslam and
Tao Zeng and
Rongjian Li and
Jing He},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Exploratory Studies Detecting Secondary Structures in Medium Resolution
3D Cryo-EM Images Using Deep Convolutional Neural Networks},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {628--632},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233704},
doi = {10.1145/3233547.3233704},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/HaslamZL018.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HassanRAS18,
author = {Liban Hassan and
Zahra Rajabi and
Nasrin Akhter and
Amarda Shehu},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Community Detection for Decoy Selection in Template-free Protein Structure
Prediction},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {621--627},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233703},
doi = {10.1145/3233547.3233703},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/HassanRAS18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HeT18,
author = {Ting He and
Casey Overby Taylor},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Identifying Symptom Clusters in Women Experiencing Preterm Birth},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {520},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233629},
doi = {10.1145/3233547.3233629},
timestamp = {Wed, 25 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/HeT18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HoffmanVQWW18,
author = {Ryan A. Hoffman and
Janani Venugopalan and
Li Qu and
Hang Wu and
May D. Wang},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Improving Validity of Cause of Death on Death Certificates},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {178--183},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233581},
doi = {10.1145/3233547.3233581},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/HoffmanVQWW18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HooshmandAGAT18,
author = {Sahar Hooshmand and
Paniz Abedin and
Daniel Gibney and
Srinivas Aluru and
Sharma V. Thankachan},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Faster Computation of Genome Mappability},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {537},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233645},
doi = {10.1145/3233547.3233645},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/HooshmandAGAT18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HouAC18,
author = {Jie Hou and
Badri Adhikari and
Jianlin Cheng},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {DeepSF: Deep Convolutional Neural Network for Mapping Protein Sequences
to Folds},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {565},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233716},
doi = {10.1145/3233547.3233716},
timestamp = {Tue, 27 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/HouAC18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HrytsenkoDS18,
author = {Yana Hrytsenko and
Noah M. Daniels and
Rachel S. Schwartz},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Efficient Distance Calculations Between Genomes Using Mathematical
Approximation},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {546},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233654},
doi = {10.1145/3233547.3233654},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/HrytsenkoDS18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HsiehOC18,
author = {Min{-}Wei Hsieh and
Hayato Ohwada and
Sheng{-}I Chen},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Practical Feature Selection for Lung Cancer Gene Detection},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {522},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233631},
doi = {10.1145/3233547.3233631},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/HsiehOC18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/JagodzinskiCM18,
author = {Filip Jagodzinski and
Brian Y. Chen and
Kevin Molloy},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {{ACM-BCB} 2018 Computational Structural Bioinformatics Workshop {(CSBW)}
Chairs' Welcome},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {613--614},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233701},
doi = {10.1145/3233547.3233701},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/JagodzinskiCM18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/JensenBDFLSGC18,
author = {Tanner D. Jensen and
Kristi A. Bresciano and
Emma Dallon and
M. Stanley Fujimoto and
Cole A. Lyman and
Enoch Stewart and
Joel Griffitts and
Mark J. Clement},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {The PepSeq Pipeline: Software for Antimicrobial Motif Discovery in
Randomly-Generated Peptide Libraries},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {139--144},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233599},
doi = {10.1145/3233547.3233599},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/JensenBDFLSGC18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KamatJMTAW18,
author = {Alisha Kamat and
Ting Jin and
So Yeon Min and
Flaminia Talos and
Jonas S. Almeida and
Daifeng Wang},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Interpretable Machine Learning Approach Reveals Developmental Gene
Expression Biomarkers for Cancer Patient Outcomes at Early Stages},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {510},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233619},
doi = {10.1145/3233547.3233619},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/KamatJMTAW18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KamruzzamanKK18,
author = {Methun Kamruzzaman and
Ananth Kalyanaraman and
Bala Krishnamoorthy},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Detecting Divergent Subpopulations in Phenomics Data using Interesting
Flares},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {155--164},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233593},
doi = {10.1145/3233547.3233593},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/KamruzzamanKK18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KhaledianGBB18,
author = {Ehdieh Khaledian and
Assefaw H. Gebremedhin and
Kelly A. Brayton and
Shira L. Broschat},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {A Network Science Approach for Determining the Ancestral Phylum of
Bacteria},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {398--403},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233575},
doi = {10.1145/3233547.3233575},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/KhaledianGBB18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KhudyakovMSZ18,
author = {Yury Khudyakov and
Ion I. Mandoiu and
Pavel Skums and
Alexander Zelikovsky},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {{ACM-BCB} 2018 Computational Advances in Molecular Epidemiology {(CAME)}
Chairs' Welcome},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {574},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233670},
doi = {10.1145/3233547.3233670},
timestamp = {Fri, 27 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/KhudyakovMSZ18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KotlarW18,
author = {Alex V. Kotlar and
Thomas S. Wingo},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Tutorial: Rapidly Identifying Disease-associated Rare Variants using
Annotation and Machine Learning at Whole-genome Scale Online},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {558},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233666},
doi = {10.1145/3233547.3233666},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/KotlarW18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KrivakJH18,
author = {Radoslav Kriv{\'{a}}k and
Luk{\'{a}}s Jendele and
David Hoksza},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Peptide-Binding Site Prediction From Protein Structure via points
on the Solvent Accessible Surface},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {645--650},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233708},
doi = {10.1145/3233547.3233708},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/KrivakJH18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LahiriVD18,
author = {Aditya Lahiri and
Priyadharshini S. Venkatasubramani and
Aniruddha Datta},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Bayesian Modeling of Plant Drought Resistance Pathway},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {576},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233676},
doi = {10.1145/3233547.3233676},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/LahiriVD18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LetuHLZ18,
author = {Letu Qingge and
Xiaozhou He and
Zhihui Liu and
Binhai Zhu},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {On the Minimum Copy Number Generation Problem in Cancer Genomics},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {260--269},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233586},
doi = {10.1145/3233547.3233586},
timestamp = {Tue, 02 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/LetuHLZ18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiB18,
author = {Lei Li and
Mukul S. Bansal},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {An Integer Linear Programming Solution for the Domain-Gene-Species
Reconciliation Problem},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {386--397},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233603},
doi = {10.1145/3233547.3233603},
timestamp = {Sun, 04 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/LiB18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiangYHRY18,
author = {Xiao Liang and
William Chad Young and
Ling{-}Hong Hung and
Adrian E. Raftery and
Ka Yee Yeung},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Integration of Multiple Data Sources for Gene Network Inference using
Genetic Perturbation Data: Extended Abstract},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {601--602},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233692},
doi = {10.1145/3233547.3233692},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/LiangYHRY18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LibbrechtBN18,
author = {Maxwell W. Libbrecht and
Jeffrey A. Bilmes and
William Stafford Noble},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Choosing Non-redundant Representative Subsets Of Protein Sequence
Data Sets Using Submodular Optimization},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {566},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233717},
doi = {10.1145/3233547.3233717},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/LibbrechtBN18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LimX18,
author = {Hansaim Lim and
Lei Xie},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Target Gene Prediction of Transcription Factor Using a New Neighborhood-regularized
Tri-factorization One-class Collaborative Filtering Algorithm},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {1--10},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233551},
doi = {10.1145/3233547.3233551},
timestamp = {Fri, 28 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/LimX18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LoM18,
author = {Chieh Lo and
Radu Marculescu},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {MetaNN: Accurate Classification of Host Phenotypes From Metagenomic
Data Using Neural Networks},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {608--609},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233696},
doi = {10.1145/3233547.3233696},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/LoM18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LyuH18,
author = {Boyu Lyu and
Anamul Haque},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Deep Learning Based Tumor Type Classification Using Gene Expression
Data},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {89--96},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233588},
doi = {10.1145/3233547.3233588},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/LyuH18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MaGDCW18,
author = {Christopher Ma and
Tina Gui and
Xin Dang and
Yixin Chen and
Dawn Wilkins},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Integration of Cancer Data through Multiple Mixed Graphical Model},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {341--350},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233557},
doi = {10.1145/3233547.3233557},
timestamp = {Wed, 11 Jan 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/MaGDCW18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Maayan18,
author = {Avi Ma'ayan},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {The Art of Connectivity Mapping},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {563},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233610},
doi = {10.1145/3233547.3233610},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/Maayan18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MaherRCI18,
author = {Alexander S. Maher and
Kenneth A. Rostowsky and
Nahian F. Chowdhury and
Andrei Irimia},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Neuroinformatics and Analysis of Connectomic Alterations Due to Cerebral
Microhemorrhages in Geriatric Mild Neurotrauma: Microhemorrhages in
Geriatric Neurotrauma},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {165--171},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233598},
doi = {10.1145/3233547.3233598},
timestamp = {Fri, 29 Nov 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/MaherRCI18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MajeskeJHI18,
author = {Nicholas Majeske and
Filip Jagodzinski and
Brian Hutchinson and
Tanzima Z. Islam},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Low Rank Smoothed Sampling Methods for Identifying Impactful Pairwise
Mutations},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {681--686},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233714},
doi = {10.1145/3233547.3233714},
timestamp = {Tue, 01 Feb 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/MajeskeJHI18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MangulYZ18,
author = {Serghei Mangul and
Harry (Taegyun) Yang and
Noah Zaitlen},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {{ROP:} Dumpster Diving in RNA-sequencing to Find the Source of 1 Trillion
Reads Across Diverse Adult Human Tissues},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {573},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233726},
doi = {10.1145/3233547.3233726},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/MangulYZ18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ManoochehriKBN18,
author = {Hafez Eslami Manoochehri and
Susmitha Sri Kadiyala and
Javad Birjandtalab and
Mehrdad Nourani},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Feature Selection to Predict Compound's Effect on Aging},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {419--427},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233597},
doi = {10.1145/3233547.3233597},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ManoochehriKBN18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MarksHNN18,
author = {Brian Marks and
Nina Hees and
Hung Nguyen and
Tin Nguyen},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {{MIA:} Multi-cohort Integrated Analysis for Biomarker Identification},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {360--365},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233605},
doi = {10.1145/3233547.3233605},
timestamp = {Thu, 09 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/MarksHNN18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MilanoG018,
author = {Marianna Milano and
Pietro Hiram Guzzi and
Mario Cannataro},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {HetNetAligner: {A} Novel Algorithm for Local Alignment of Heterogeneous
Biological Networks},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {598--599},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233690},
doi = {10.1145/3233547.3233690},
timestamp = {Wed, 19 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/MilanoG018.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MilanoHV0G18,
author = {Marianna Milano and
Wayne B. Hayes and
Pierangelo Veltri and
Mario Cannataro and
Pietro Hiram Guzzi},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {SL-GLAlign: Improving the Local Alignment of Biological Networks through
Simulated Annealing},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {577--578},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233677},
doi = {10.1145/3233547.3233677},
timestamp = {Wed, 26 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/MilanoHV0G18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MolloyAS18,
author = {Kevin Molloy and
Nasrin Akhter and
Amarda Shehu},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Modeling Macromolecular Structures and Motions: Computational Methods
for Sampling and Analysis of Energy Landscapes},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {554},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233662},
doi = {10.1145/3233547.3233662},
timestamp = {Tue, 15 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/MolloyAS18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MorrisDCHB18,
author = {Paul Morris and
Yahchayil DaSilva and
Evan Clark and
William Edward Hahn and
Elan Barenholtz},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Convolutional Neural Networks for Predicting Molecular Binding Affinity
to {HIV-1} Proteins},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {220--225},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233596},
doi = {10.1145/3233547.3233596},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/MorrisDCHB18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MortonHP18,
author = {Scott P. Morton and
Jonathan Howton and
Joshua L. Phillips},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Sub-Class Differences of PH-Dependent {HIV} {GP120-CD4} Interactions},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {663--668},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233711},
doi = {10.1145/3233547.3233711},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/MortonHP18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MotohashiTAO18,
author = {Haruka Motohashi and
Tatsuro Teraoka and
Shin Aoki and
Hayato Ohwada},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Ranking Methods of Candidates for p53 Inhibitors Considering Cytotoxicity
Using Machine Learning},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {521},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233630},
doi = {10.1145/3233547.3233630},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/MotohashiTAO18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/NafeesRP18,
author = {Saba Nafees and
Sean H. Rice and
Caleb Phillips},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Analyzing Genomic Data Using Tensor-based Orthogonal Polynomials},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {584},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233682},
doi = {10.1145/3233547.3233682},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/NafeesRP18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/NekhaiAAA18,
author = {Anton Nekhai and
Maria Atamanova and
Pavel Avdeyev and
Max A. Alekseyev},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {A Rapid Exact Solution for the Guided Genome Halving Problem},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {550},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233659},
doi = {10.1145/3233547.3233659},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/NekhaiAAA18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/NguyenBW18,
author = {Nam D. Nguyen and
Ian Blaby and
Daifeng Wang},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {A Manifold Learning Based Approach to Reveal the Functional Linkages
across Multiple Gene Networks},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {514},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233622},
doi = {10.1145/3233547.3233622},
timestamp = {Tue, 14 Sep 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/NguyenBW18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/NordHCW18,
author = {Alex S. Nord and
Peter V. Hornbeck and
Kaitlin Carey and
Travis J. Wheeler},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Splice-Aware Multiple Sequence Alignment of Protein Isoforms},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {200--210},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233592},
doi = {10.1145/3233547.3233592},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/NordHCW18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/NowlingE18,
author = {Ronald J. Nowling and
Scott J. Emrich},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Detecting Chromosomal Inversions from Dense SNPs by Combining {PCA}
and Association Tests},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {270--276},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233571},
doi = {10.1145/3233547.3233571},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/NowlingE18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/OlsonW18,
author = {Daniel Olson and
Travis J. Wheeler},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {{ULTRA:} {A} Model Based Tool to Detect Tandem Repeats},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {37--46},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233604},
doi = {10.1145/3233547.3233604},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/OlsonW18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/OthmanRTKV18,
author = {Manal Othman and
Sujay Ratna and
Anant Tewari and
Anthony M. Kang and
Iosif I. Vaisman},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Machine Learning Classification of Antimicrobial Peptides Using Reduced
Alphabets},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {548},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233657},
doi = {10.1145/3233547.3233657},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/OthmanRTKV18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/PannuCTA18,
author = {Jodh Pannu and
Sriram P. Chockalingam and
Sharma V. Thankachan and
Srinivas Aluru},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {An Alignment-free Heuristic for Fast Sequence Comparisons with Applications
to Phylogeny Reconstruction},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {540},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233648},
doi = {10.1145/3233547.3233648},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/PannuCTA18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ParkMSXZBTAW18,
author = {Cooper J. Park and
Keir J. Macartney and
Junfu Shen and
Kunpeng Xie and
Xin Zhang and
R. Daniel Bergeron and
W. Kelley Thomas and
Cheryl P. Andam and
Anthony Westbrook},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {A Novel Approach for Increasing Taxonomic Resolution in Protein-Based
Alignments},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {538},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233646},
doi = {10.1145/3233547.3233646},
timestamp = {Mon, 15 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ParkMSXZBTAW18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/PattabiramanW18,
author = {Srilakshmi Pattabiraman and
Tandy J. Warnow},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Are Profile Hidden Markov Models Identifiable?},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {448--456},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233563},
doi = {10.1145/3233547.3233563},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/PattabiramanW18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/PaulSPM18,
author = {Soumya Paul and
Cui Su and
Jun Pang and
Andrzej Mizera},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {A Decomposition-based Approach towards the Control of Boolean Networks},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {11--20},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233550},
doi = {10.1145/3233547.3233550},
timestamp = {Sat, 31 Aug 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/PaulSPM18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/PerryGO18,
author = {Daniela Silvia Perry and
Jeremy Gunawardena and
Nicolas M. Orsi},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Identification of Non-invasive Cytokine Biomarkers for Polycystic
Ovary Syndrome Using Supervised Machine Learning},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {502},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233611},
doi = {10.1145/3233547.3233611},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/PerryGO18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Pfaltz18,
author = {John L. Pfaltz},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {An Algorithmic Approach to the Representation of Biological Information
and Long-term Memory},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {579--580},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233679},
doi = {10.1145/3233547.3233679},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/Pfaltz18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/PhillipsCN18,
author = {Joshua L. Phillips and
Michael E. Colvin and
Shawn D. Newsam},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Dimensionality Estimation of Protein Dynamics Using Polymer Models},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {675--680},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233713},
doi = {10.1145/3233547.3233713},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/PhillipsCN18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/PietrasOS18,
author = {Christopher Michael Pietras and
Faith Ocitti and
Donna K. Slonim},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {{TEMPO:} Detecting Pathway-Specific Temporal Dysregulation of Gene
Expression in Disease},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {79--88},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233559},
doi = {10.1145/3233547.3233559},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/PietrasOS18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/PourD18,
author = {Ali Foroughi Pour and
Lori A. Dalton},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Biomarker Discovery via Optimal Bayesian Feature Filtering for Structured
Multiclass Data},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {331--340},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233558},
doi = {10.1145/3233547.3233558},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/PourD18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/PourD18a,
author = {Ali Foroughi Pour and
Lori A. Dalton},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Bayesian Biomarker Discovery for RNAseq Data},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {603--604},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233693},
doi = {10.1145/3233547.3233693},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/PourD18a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/PratapaAKFTPM18,
author = {Aditya Pratapa and
Neil Adames and
Pavel K. Kraikivski and
Nicholas Franzese and
John J. Tyson and
Jean Peccoud and
T. M. Murali},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {CrossPlan: Systematic Planning of Genetic Crosses to Validate Mathematical
Models},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {567},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233718},
doi = {10.1145/3233547.3233718},
timestamp = {Wed, 25 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/PratapaAKFTPM18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/PratapaJRM18,
author = {Aditya Pratapa and
Amogh P. Jalihal and
S. S. Ravi and
T. M. Murali},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Efficient Synthesis of Mutants Using Genetic Crosses},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {53--62},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233556},
doi = {10.1145/3233547.3233556},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/PratapaJRM18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Qi18,
author = {Yanjun Qi},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {ACM-BCB'18 Tutorial: Making Deep Learning Understandable for Analyzing
Sequential Data about Gene Regulation},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {556},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233664},
doi = {10.1145/3233547.3233664},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/Qi18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/RahmanDGP18,
author = {Aminur Rahman and
Saugato Rahman Dhruba and
Souparno Ghosh and
Ranadip Pal},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Recursive Model for Dose-time Responses in Pharmacological Studies},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {583},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233681},
doi = {10.1145/3233547.3233681},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/RahmanDGP18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/RahmanR18,
author = {Mohammad Arifur Rahman and
Huzefa Rangwala},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {RegMIL: Phenotype Classification from Metagenomic Data},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {145--154},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233585},
doi = {10.1145/3233547.3233585},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/RahmanR18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Rastegar-Mojarad18,
author = {Majid Rastegar{-}Mojarad and
Sijia Liu and
Yanshan Wang and
Naveed Afzal and
Liwei Wang and
Feichen Shen and
Sunyang Fu and
Hongfang Liu},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {BioCreative/OHNLP Challenge 2018},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {575},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233672},
doi = {10.1145/3233547.3233672},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Rastegar-Mojarad18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/RenADK18,
author = {Yuanfang Ren and
Ahmet Ay and
Alin Dobra and
Tamer Kahveci},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Characterizing Building Blocks of Resource Constrained Biological
Networks},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {581--582},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233680},
doi = {10.1145/3233547.3233680},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/RenADK18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/RichterK18,
author = {Aaron N. Richter and
Taghi M. Khoshgoftaar},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Melanoma Risk Prediction with Structured Electronic Health Records},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {194--199},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233561},
doi = {10.1145/3233547.3233561},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/RichterK18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/RoychoudhuryS18,
author = {Sharmila Roychoudhury and
Amarda Shehu},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Analysis of Molecular Structure Data]\{Systematic Study of Different
Design Decisions in Markov Model-based Analysis of Molecular Structure
Data: Extended Abstract},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {508--509},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233618},
doi = {10.1145/3233547.3233618},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/RoychoudhuryS18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/SarkarZMP18,
author = {Hirak Sarkar and
Mohsen Zakeri and
Laraib Malik and
Rob Patro},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Towards Selective-Alignment: Bridging the Accuracy Gap between Alignment-Based
and Alignment-Free Transcript Quantification},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {27--36},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233589},
doi = {10.1145/3233547.3233589},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/SarkarZMP18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ShamsPKZLYP18,
author = {Shayan Shams and
Richard Platania and
Joohyun Kim and
Jian Zhang and
Kisung Lee and
Seungwon Yang and
Seung{-}Jong Park},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {A Distributed Semi-Supervised Platform for DNase-Seq Data Analytics
using Deep Generative Convolutional Networks},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {244--253},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233601},
doi = {10.1145/3233547.3233601},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ShamsPKZLYP18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Singh18,
author = {Mona Singh},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Sequence, Structure and Network Methods to Uncover Cancer Genes},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {561},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233609},
doi = {10.1145/3233547.3233609},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/Singh18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/SinghG18,
author = {Salvi Singh and
Nancy Lan Guo},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Genet-CNV: Boolean Implication Networks for Modelling Genome-Wide
Co-occurrence of {DNA} Copy Number Variations},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {544},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233652},
doi = {10.1145/3233547.3233652},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/SinghG18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/SoferG18,
author = {Tamar Sofer and
Mariaelisa Graff},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Analysis of Sequencing Data: Tutorial Overview Abstract},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {553},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233661},
doi = {10.1145/3233547.3233661},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/SoferG18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/StephensI18,
author = {Zachary D. Stephens and
Ravishankar K. Iyer},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Measuring the Mappability Spectrum of Reference Genome Assemblies},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {47--52},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233582},
doi = {10.1145/3233547.3233582},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/StephensI18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/SyzonenkoP18,
author = {Ivan Syzonenko and
Joshua L. Phillips},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Hybrid Spectral/Subspace Clustering of Molecular Dynamics Simulations},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {325--330},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233595},
doi = {10.1145/3233547.3233595},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/SyzonenkoP18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/TabaszewskiGE18,
author = {Pawel Tabaszewski and
Pawel G{\'{o}}recki and
Oliver Eulenstein},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Phylogenetic Consensus for Exact Median Trees},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {366--375},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233560},
doi = {10.1145/3233547.3233560},
timestamp = {Fri, 17 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/TabaszewskiGE18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/TamimM18,
author = {Saleh Tamim and
Blake Meyers},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Using a Network Approach to Identify Genes Important during Anther
Development},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {530},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233639},
doi = {10.1145/3233547.3233639},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/TamimM18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/TradigoVLGQV18,
author = {Giuseppe Tradigo and
Patrizia Vizza and
Pasquale Lambardi and
Pietro Hiram Guzzi and
Aldo Quattrone and
Pierangelo Veltri},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {A Voice-Aware System for Vocal Wellness},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {693--698},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233729},
doi = {10.1145/3233547.3233729},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/TradigoVLGQV18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/TsangA18,
author = {Hsinyi Tsang and
KanakaDurga Addepalli},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {National Cancer Institute Cloud Resources},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {707},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233671},
doi = {10.1145/3233547.3233671},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/TsangA18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/TurkASUS18,
author = {Erdem Turk and
Turkan Arit and
Delikanli Mertcan Susus and
Ilayda Ucar and
Baris E. Suzek},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {ProSetComp: {A} Platform for Protein Set Comparisons},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {519},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233628},
doi = {10.1145/3233547.3233628},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/TurkASUS18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/VeltriLXOCHBZEF18,
author = {Daniel Veltri and
Zhiwen Li and
Sandhya Xirasagar and
Andrew J. Oler and
Xi Cheng and
Ke Huang and
Jason Barnett and
Lingwen Zhang and
Octavio Juarez Espinosa and
Yongjie Fan and
Morgan Similuk and
Magdalena Walkiewicz and
Celine Hong and
Joyce Johnson and
Joshua D. Milner},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Balancing Confidentiality and Sharing of Genomic and Phenotypic Data
in a Clinical Research System},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {533},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233641},
doi = {10.1145/3233547.3233641},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/VeltriLXOCHBZEF18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/VijayanM18,
author = {Vipin Vijayan and
Tijana Milenkovic},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Aligning Dynamic Networks with DynaWAVE},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {569},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233721},
doi = {10.1145/3233547.3233721},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/VijayanM18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WangC18,
author = {Jinbu Wang and
Brian Y. Chen},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {{MAPS:} Analyzing Peptide Binding Subsites in Major Histocompatibility
Complexes},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {656--662},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233710},
doi = {10.1145/3233547.3233710},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/WangC18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WangCQ18,
author = {Huijun Wang and
An Chi and
Xudong Qiao},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Understand Compound Mechanism of Action at a System Biology Scale
through Chemical Biology Data Management and Analysis},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {515},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233623},
doi = {10.1145/3233547.3233623},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/WangCQ18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WangGCTWL18,
author = {Huijun Wang and
Francisco Garcia and
An Chi and
Ivan Cornella Taracido and
Anne Mai Wasssermann and
Andy Liaw},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Profiling Diverse Chemical Space to Map the Druggable Proteome},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {516},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233624},
doi = {10.1145/3233547.3233624},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/WangGCTWL18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WangN18,
author = {Tianyu Wang and
Sheida Nabavi},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Single-cell Clustering Based on Word Embedding and Nonparametric Methods},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {130--138},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233590},
doi = {10.1145/3233547.3233590},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/WangN18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WangZLC018,
author = {Xuan Wang and
Yu Zhang and
Qi Li and
Yinyin Chen and
Jiawei Han},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Open Information Extraction with Meta-pattern Discovery in Biomedical
Literature},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {291--300},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233594},
doi = {10.1145/3233547.3233594},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/WangZLC018.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WillettPIKBB18,
author = {DuWayne L. Willett and
Ambarish Pandey and
NNeka L. Ifejika and
Vaishnavi Kannan and
Jarett D. Berry and
Mujeeb A. Basit},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {State Diagrams for Automating Disease "Risk Pyramid" Data Collection
and Tailored Clinical Decision Support},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {551--552},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233660},
doi = {10.1145/3233547.3233660},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/WillettPIKBB18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WooJY18,
author = {Hyun{-}Myung Woo and
Hyundoo Jeong and
Byung{-}Jun Yoon},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Comprehensive Updates in Network Synthesis Models to Create An Improved
Benchmark for Network Alignment Algorithms},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {587--588},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233684},
doi = {10.1145/3233547.3233684},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/WooJY18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WrightRCE18,
author = {Gabriel Wright and
Anabel Rodriguez and
Patricia L. Clark and
Scott J. Emrich},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {HarMinMax: Harmonizing Codon Usage to Replicate Local Host Translation},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {528},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233637},
doi = {10.1145/3233547.3233637},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/WrightRCE18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/XuZLW18,
author = {Clerk Nuo Xu and
Changjiang Zhang and
Leng Leng Lim and
Aloysius Wong},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Bioinformatic Analysis of Nucleotide Cyclase Functional Centers and
Development of ACPred Webserver},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {122--129},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233549},
doi = {10.1145/3233547.3233549},
timestamp = {Sun, 21 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/XuZLW18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/XueC18,
author = {Qinghan Xue and
Mooi Choo Chuah},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Deep Learning Based Medical Diagnosis System Using Multiple Data Sources},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {699--706},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233730},
doi = {10.1145/3233547.3233730},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/XueC18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/YalamanchiliJL18,
author = {Hari Krishna Yalamanchili and
Hyun{-}Hwan Jeong and
Zhandong Liu},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Decoding {TDP-43} Dependent Cryptic Splicing in Amyotrophic Lateral
Sclerosis and Identifying Novel Disease-causing Genes},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {612},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233698},
doi = {10.1145/3233547.3233698},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/YalamanchiliJL18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/YanYL0H18,
author = {Chaochao Yan and
Jiawen Yao and
Ruoyu Li and
Zheng Xu and
Junzhou Huang},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Weakly Supervised Deep Learning for Thoracic Disease Classification
and Localization on Chest X-rays},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {103--110},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233573},
doi = {10.1145/3233547.3233573},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/YanYL0H18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/YangCS18,
author = {Jingjing Yang and
Renzhi Cao and
Dong Si},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {EMNets: {A} Convolutional Autoencoder for Protein Surface Retrieval
Based on Cryo-Electron Microscopy Imaging},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {639--644},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233707},
doi = {10.1145/3233547.3233707},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/YangCS18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/YeungHL18,
author = {Ka Yee Yeung and
Ling{-}Hong Hung and
Wes Lloyd},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Using BioDepot-workflow-Builder to Create and Execute Reproducible
Bioinformatics Workflows},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {557},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233665},
doi = {10.1145/3233547.3233665},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/YeungHL18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZarkoobDMKFB18,
author = {Hadi Zarkoob and
Prasanna Desikan and
Prakash Menon and
Harshna Kapashi and
Hossein Fakhrai{-}Rad and
Barrie Bradley},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Early Prediction of Risk Adjustment Factor {(RAF)} for Medicare Advantage
{(MA)} and Evaluation of its Benefits},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {534},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233642},
doi = {10.1145/3233547.3233642},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ZarkoobDMKFB18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZenginS18,
author = {Talip Zengin and
Tugba Onal Suzek},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {{TCGA} Lung Cancer Analysis Pipeline},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {504},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233615},
doi = {10.1145/3233547.3233615},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ZenginS18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhangRLWZ0S18,
author = {Gongbo Zhang and
Debarati Roychowdhury and
Pengyuan Li and
Heng{-}Yi Wu and
Shijun Zhang and
Lang Li and
Hagit Shatkay},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Identifying Experimental Evidence in Biomedical Abstracts Relevant
to Drug-Drug Interactions},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {414--418},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233568},
doi = {10.1145/3233547.3233568},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ZhangRLWZ0S18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhangRMJWG18,
author = {Xu Zhang and
Karen E. Ross and
Tapan K. Maity and
Jake Jaffe and
Cathy H. Wu and
Udayan Guha},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {{PTM} Knowledge Networks and {LINCS} Multi-Omics Data for Kinase Inhibitor
Drug-Analytics in Lung Cancer},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {524},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233633},
doi = {10.1145/3233547.3233633},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ZhangRMJWG18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhangWZXWH18,
author = {Xiaoyu Zhang and
Sheng Wang and
Feiyun Zhu and
Zheng Xu and
Yuhong Wang and
Junzhou Huang},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Seq3seq Fingerprint: Towards End-to-end Semi-supervised Deep Drug
Discovery},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {404--413},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233548},
doi = {10.1145/3233547.3233548},
timestamp = {Fri, 26 Jul 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ZhangWZXWH18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhangZFMCH18,
author = {Songyao Zhang and
Shaowu Zhang and
Xiaonan Fan and
Jia Meng and
Yidong Chen and
Yufei Huang},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {A Machine Learning Approach for Uncovering N6-methyladenosine-Disease
Association},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {600},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233691},
doi = {10.1145/3233547.3233691},
timestamp = {Mon, 27 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ZhangZFMCH18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhangZLFL18,
author = {Yi Zhang and
Xiaofei Zhang and
Andrew N. Lane and
Teresa W.{-}M. Fan and
Jinze Liu},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {TFmeta: {A} Machine Learning Approach to Uncover Transcription Factors
Governing Metabolic Reprogramming},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {351--359},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233580},
doi = {10.1145/3233547.3233580},
timestamp = {Mon, 22 Nov 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ZhangZLFL18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhaoJL0018,
author = {Sendong Zhao and
Meng Jiang and
Ming Liu and
Bing Qin and
Ting Liu},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {CausalTriad: Toward Pseudo Causal Relation Discovery and Hypotheses
Generation from Medical Text Data},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {184--193},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233555},
doi = {10.1145/3233547.3233555},
timestamp = {Sun, 08 Dec 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ZhaoJL0018.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhbannikovAY18,
author = {Ilya Zhbannikov and
Konstantin G. Arbeev and
Anatoliy I. Yashin},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Applying Stochastic Process Model to Imputation of Censored Longitudinal
Data},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {457--464},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233591},
doi = {10.1145/3233547.3233591},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ZhbannikovAY18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhengMBG18,
author = {Qi Zheng and
Jacquelyn Meisel and
Casey Bartow{-}McKenney and
Elizabeth A. Grice},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {HmmUFOtu: An {HMM} and Phylogenetic Placement based Ultra-fast Taxonomic
Assignment and {OTU} Picking Tool for Microbiome Amplicon Sequencing
Studies},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {503},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233612},
doi = {10.1145/3233547.3233612},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ZhengMBG18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhouLM18,
author = {Gaoxiang Zhou and
Kai{-}Wen Liang and
Natasa Miskov{-}Zivanov},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Sensitivity Analysis of Discrete Models and Application in Biological
Networks},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {605--606},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233694},
doi = {10.1145/3233547.3233694},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ZhouLM18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhuGLH18,
author = {Feiyun Zhu and
Jun Guo and
Ruoyu Li and
Junzhou Huang},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Robust Actor-Critic Contextual Bandit for Mobile Health (mHealth)
Interventions},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {492--501},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233554},
doi = {10.1145/3233547.3233554},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ZhuGLH18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhuKLH18,
author = {Weizhong Zhu and
Tarrah Kirkpatrick and
Josephina Lin and
Susan Hmwe},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Expert and Student User Evaluation of Semantic Protocol Search},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {511--512},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233620},
doi = {10.1145/3233547.3233620},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ZhuKLH18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhuLZYH18,
author = {Feiyun Zhu and
Peng Liao and
Xinliang Zhu and
Jiawen Yao and
Junzhou Huang},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Cohesion-driven Online Actor-Critic Reinforcement Learning for mHealth
Intervention},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {482--491},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233553},
doi = {10.1145/3233547.3233553},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ZhuLZYH18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhuTLA18,
author = {Weizhong Zhu and
Jennifer Berano Teh and
Haiqing Li and
Saro H. Armenian},
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Knowledge Extraction of Long-Term Complications from Clinical Narratives
of Blood Cancer Patients with {HCT} Treatments},
booktitle = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
pages = {525--526},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547.3233635},
doi = {10.1145/3233547.3233635},
timestamp = {Wed, 21 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ZhuTLA18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/bcb/2018,
editor = {Amarda Shehu and
Cathy H. Wu and
Christina Boucher and
Jing Li and
Hongfang Liu and
Mihai Pop},
title = {Proceedings of the 2018 {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2018, Washington,
DC, USA, August 29 - September 01, 2018},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3233547},
doi = {10.1145/3233547},
timestamp = {Mon, 10 Jun 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/2018.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/0005WZH17,
author = {Zheng Xu and
Sheng Wang and
Feiyun Zhu and
Junzhou Huang},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Seq2seq Fingerprint: An Unsupervised Deep Molecular Embedding for
Drug Discovery},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {285--294},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107424},
doi = {10.1145/3107411.3107424},
timestamp = {Sat, 20 Jul 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/0005WZH17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AbbasE17,
author = {Mostafa M. Abbas and
Yasser El{-}Manzalawy},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Predictive and Comparative Network Analysis of the Gut Microbiota
in Type 2 Diabetes},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {313--320},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107472},
doi = {10.1145/3107411.3107472},
timestamp = {Tue, 06 Aug 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/AbbasE17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AbdelkarimMD17,
author = {Basma Abdelkarim and
Vincent Maranda and
Guy Drouin},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {The Fate of Retrotransposed Processed Genes in \emph{Arabidopsis Thaliana}},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {579},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108186},
doi = {10.1145/3107411.3108186},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/AbdelkarimMD17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AbdelkarimP17,
author = {Basma Abdelkarim and
Theodore J. Perkins},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Super-enhancer Dynamics Throughout Myogenesis},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {580},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108187},
doi = {10.1145/3107411.3108187},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/AbdelkarimP17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AdjerohATLJAZ17,
author = {Donald A. Adjeroh and
Maen Allaga and
Jun Tan and
Jie Lin and
Yue Jiang and
Ahmed Abbasi and
Xiaobo Zhou},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {String-Based Models for Predicting RNA-Protein Interaction},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {661--666},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107508},
doi = {10.1145/3107411.3107508},
timestamp = {Sun, 04 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/AdjerohATLJAZ17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AgapitoGC17,
author = {Giuseppe Agapito and
Pietro Hiram Guzzi and
Mario Cannataro},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Using GenotypeAnalytics to Analyze Pharmacogenomic Datasets},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {740--743},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108177},
doi = {10.1145/3107411.3108177},
timestamp = {Wed, 19 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/AgapitoGC17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AhernSYD17,
author = {Olivia M. Ahern and
Rebecca J. Stevick and
Li Yuan and
Noah M. Daniels},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Analysis of 16S Genomic Data using Graphical Databases},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {599},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108208},
doi = {10.1145/3107411.3108208},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/AhernSYD17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AhmadianWTC17,
author = {Mansooreh Ahmadian and
Shuo Wang and
John J. Tyson and
Young Cao},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Hybrid {ODE/SSA} Model of the Budding Yeast Cell Cycle Control Mechanism
with Mutant Case Study},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {464--473},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107437},
doi = {10.1145/3107411.3107437},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/AhmadianWTC17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Al-NasrYJJ17,
author = {Kamal Al{-}Nasr and
Feras Yousef and
Christopher Jones and
Ruba Jebril},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Geometry Analysis for Protein Secondary Structures Matching Problem},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {716--721},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107505},
doi = {10.1145/3107411.3107505},
timestamp = {Mon, 16 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Al-NasrYJJ17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AminGNH17,
author = {Sara A. Amin and
Venkatesh Endalur Gopinarayanan and
Nikhil U. Nair and
Soha Hassoun},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {ProSol {DB:} {A} Protein Solubility Database},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {625},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108235},
doi = {10.1145/3107411.3108235},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/AminGNH17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AnderssonJ17,
author = {Erik Andersson and
Filip Jagodzinski},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {ProMuteHT: {A} High Throughput Compute Pipeline for Generating Protein
Mutants \emph{in silico}},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {655--660},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3116251},
doi = {10.1145/3107411.3116251},
timestamp = {Fri, 25 Aug 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/AnderssonJ17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AnyaiweS17,
author = {Oriehi Edisemi Destiny Anyaiwe and
Gautam B. Singh},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Fuzzy Prediction of Incipient Alzheimer's Disease cases from Mild
Cognitive Impaired cases},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {735--739},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108176},
doi = {10.1145/3107411.3108176},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/AnyaiweS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AtiiaHW17,
author = {Ali Atiia and
Corbin Hopper and
J{\'{e}}r{\^{o}}me Waldisp{\"{u}}hl},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Computational Intractability Generates the Topology of Biological
Networks},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {500--509},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107453},
doi = {10.1145/3107411.3107453},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/AtiiaHW17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AwanS17,
author = {Muaaz Gul Awan and
Fahad Saeed},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {An Out-of-Core {GPU} based Dimensionality Reduction Algorithm for
Big Mass Spectrometry Data and Its Application in Bottom-up Proteomics},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {550--555},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107466},
doi = {10.1145/3107411.3107466},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/AwanS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AwdehP17,
author = {Aseel Awdeh and
Theodore J. Perkins},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Analysis of Controls in ChIP-seq},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {620},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108230},
doi = {10.1145/3107411.3108230},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/AwdehP17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BelyaevaVNSU17,
author = {Anastasiya Belyaeva and
Saradha Venkatachalapathy and
Mallika Nagarajan and
G. V. Shivashankar and
Caroline Uhler},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Network Analysis Identifies Regulatory Hotspots in Regions of Chromosome
Interactions},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {606},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108216},
doi = {10.1145/3107411.3108216},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/BelyaevaVNSU17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BertacchiniBP17,
author = {Francesca Bertacchini and
Eleonora Bilotta and
Pietro S. Pantano},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Discovery of Regular Domains in Large {DNA} Data Sets},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {744--749},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3110419},
doi = {10.1145/3107411.3110419},
timestamp = {Fri, 04 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/BertacchiniBP17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BhallaSR17,
author = {Sherry Bhalla and
Suresh Sharma and
Gajendra Pal Singh Raghava},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Challenges in Prediction of different Cancer Stages using Gene Expression
Profile of Cancer Patients},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {602},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108211},
doi = {10.1145/3107411.3108211},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/BhallaSR17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BonizzoniCVS17,
author = {Paola Bonizzoni and
Simone Ciccolella and
Gianluca Della Vedova and
Mauricio Soto Gomez},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Beyond Perfect Phylogeny: Multisample Phylogeny Reconstruction via
{ILP}},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {1--10},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107441},
doi = {10.1145/3107411.3107441},
timestamp = {Wed, 16 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/BonizzoniCVS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Brent17,
author = {Michael R. Brent},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Model-based Transcriptome Engineering},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {636},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107454},
doi = {10.1145/3107411.3107454},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/Brent17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/CampMMRWBCS17,
author = {Blake Camp and
Jaya Mandivarapu and
Jay Mehta and
Nagashayana Ramamurthy and
James Wingo and
Anu G. Bourgeois and
Xiaojun Cao and
Rajshekhar Sunderraman},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {A Cross-Platform System Architecture for Form Design and Data Analytics
for Public Health},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {614},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108223},
doi = {10.1145/3107411.3108223},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/CampMMRWBCS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/CannataroS17,
author = {Mario Cannataro and
John A. Springer},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {ParBio'17: 6th Workshop on Parallel and Cloud-based Bioinformatics
and Biomedicine},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {722},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108170},
doi = {10.1145/3107411.3108170},
timestamp = {Wed, 19 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/CannataroS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Caoili17,
author = {Salvador Eugenio C. Caoili},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Development of a Polymer-Theoretic Approach to Describing Constraints
on Reactions Between Antipeptide Antibodies and Intrinsically Disordered
Peptide Antigens: Implications for B-Cell Epitope Prediction},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {583},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108190},
doi = {10.1145/3107411.3108190},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/Caoili17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChekhSBL17,
author = {Viktor Chekh and
Peter Soliz and
Mark R. Burge and
Shuang Luan},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {A Physiological Thermal Regulation Model with Application to the Diagnosis
of Diabetic Peripheral Neuropathy},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {544--549},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107512},
doi = {10.1145/3107411.3107512},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ChekhSBL17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChenL17,
author = {Huiyuan Chen and
Jing Li},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {A Flexible and Robust Multi-Source Learning Algorithm for Drug Repositioning},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {510--515},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107473},
doi = {10.1145/3107411.3107473},
timestamp = {Thu, 26 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ChenL17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChengCGSV17,
author = {Hsueh{-}Chien Cheng and
Rainer von Coelln and
Ann L. Gruber{-}Baldini and
Lisa M. Shulman and
Amitabh Varshney},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Winnow: Interactive Visualization of Temporal Changes in Multidimensional
Clinical Data},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {124--133},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107449},
doi = {10.1145/3107411.3107449},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ChengCGSV17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChengLL17,
author = {Lixin Cheng and
Pengfei Liu and
Kwong{-}Sak Leung},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {{SMILE:} {A} Novel Procedure for Subcellular Module Identification
with Localization Expansion},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {754--755},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3110415},
doi = {10.1145/3107411.3110415},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ChengLL17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChockalingamAGY17,
author = {Sriram P. Chockalingam and
Maneesha Aluru and
Hongqing Guo and
Yanhai Yin and
Srinivas Aluru},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Reverse Engineering Gene Networks: {A} Comparative Study at Genome-scale},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {480--490},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107428},
doi = {10.1145/3107411.3107428},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ChockalingamAGY17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChoiKKCY17,
author = {Jingyun Choi and
Yejin Kim and
Hun{-}Sung Kim and
In Young Choi and
Hwanjo Yu},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Tensor-Factorization-Based Phenotyping using Group Information: Case
Study on the Efficacy of Statins},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {516--525},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107423},
doi = {10.1145/3107411.3107423},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ChoiKKCY17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChuaBT17,
author = {Huey{-}Eng Chua and
Sourav S. Bhowmick and
Lisa Tucker{-}Kellogg},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {{TINTIN:} Exploiting Target Features for Signaling Network Similarity
Computation and Ranking},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {340--345},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107470},
doi = {10.1145/3107411.3107470},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ChuaBT17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ClearyKMMR17,
author = {Alan M. Cleary and
Indika Kahanda and
Brendan Mumey and
Joann Mudge and
Thiruvarangan Ramaraj},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Exploring Frequented Regions in Pan-Genomic Graphs},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {89--97},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107427},
doi = {10.1145/3107411.3107427},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ClearyKMMR17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/CohanFRG17,
author = {Arman Cohan and
Allan Fong and
Raj M. Ratwani and
Nazli Goharian},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Identifying Harm Events in Clinical Care through Medical Narratives},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {52--59},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107485},
doi = {10.1145/3107411.3107485},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/CohanFRG17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/CollinsS17,
author = {Peter Collins and
Dong Si},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {A Graph Based Method for the Prediction of Backbone Trace from Cryo-EM
Density Maps},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {691--697},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107501},
doi = {10.1145/3107411.3107501},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/CollinsS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/CristianoTV17,
author = {Francesca Cristiano and
Giuseppe Tradigo and
Pierangelo Veltri},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Associating Genomics and Clinical Information by Means of Semantic
Based Ranking},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {134--141},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107436},
doi = {10.1145/3107411.3107436},
timestamp = {Wed, 25 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/CristianoTV17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/DantasFAFFSV17,
author = {Bruno Dantas and
Calmenelias Fleitas and
Alexandre Almeida and
Jo{\~{a}}o Forja and
Alexandre P. Francisco and
Jos{\'{e}} Sim{\~{a}}o and
C{\'{a}}tia Vaz},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {NGSPipes: Fostering Reproducibility and Scalability in Biosciences},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {603},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108213},
doi = {10.1145/3107411.3108213},
timestamp = {Fri, 27 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/DantasFAFFSV17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/DawsonZN17,
author = {Mitchell Dawson and
Andrew Zisserman and
Christoffer Nell{\aa}ker},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Mining Faces from Biomedical Literature using Deep Learning},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {562--567},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107476},
doi = {10.1145/3107411.3107476},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/DawsonZN17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/DubovitskayaBSA17,
author = {Alevtina Dubovitskaya and
Thierry Buclin and
Michael Ignaz Schumacher and
Karl Aberer and
Yann Thoma},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {{TUCUXI:} An Intelligent System for Personalized Medicine from Individualization
of Treatments to Research Databases and Back},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {223--232},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107439},
doi = {10.1145/3107411.3107439},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/DubovitskayaBSA17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/DunnBEJIUS17,
author = {Tamsen Dunn and
Gwenn Berry and
Dorothea Emig{-}Agius and
Yu Jiang and
Anita Iyer and
Nitin Udar and
Michael Str{\"{o}}mberg},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Pisces: An Accurate and Versatile Single Sample Somatic and Germline
Variant Caller},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {595},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108203},
doi = {10.1145/3107411.3108203},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/DunnBEJIUS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ElMessiryZCCKS17,
author = {Adel M. ElMessiry and
Zhe Zhang and
William O. Cooper and
Thomas F. Catron and
Jan Karrass and
Munindar P. Singh},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Leveraging Sentiment Analysis for Classifying Patient Complaints},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {44--51},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107421},
doi = {10.1145/3107411.3107421},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ElMessiryZCCKS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/EsfahaniBB17,
author = {Zhila Esna Ashari Esfahani and
Kelly A. Brayton and
Shira L. Broschat},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Determining Optimal Features for Predicting Type {IV} Secretion System
Effector Proteins for \emph{Coxiella burnetii}},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {346--351},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107416},
doi = {10.1145/3107411.3107416},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/EsfahaniBB17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/EslamiAS17,
author = {Taban Eslami and
Muaaz Gul Awan and
Fahad Saeed},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {{GPU-PCC:} {A} {GPU} Based Technique to Compute Pairwise Pearson's
Correlation Coefficients for Big fMRI Data},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {723--728},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108173},
doi = {10.1145/3107411.3108173},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/EslamiAS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/FarhoodiAH17,
author = {Roshanak Farhoodi and
Bahar Akbal{-}Delibas and
Nurit Haspel},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Ranking Protein-Protein Binding Using Evolutionary Information and
Machine Learning},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {667--672},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107497},
doi = {10.1145/3107411.3107497},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/FarhoodiAH17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/FarhoodiSHHHJ17,
author = {Roshanak Farhoodi and
Max Shelbourne and
Rebecca Hsieh and
Nurit Haspel and
Brian Hutchinson and
Filip Jagodzinski},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Predicting the Effect of Point Mutations on Protein Structural Stability},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {247--252},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107492},
doi = {10.1145/3107411.3107492},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/FarhoodiSHHHJ17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/FjukstadDOLHB17,
author = {Bj{\o}rn Fjukstad and
Vanessa Dumeaux and
Karina Standahl Olsen and
Eiliv Lund and
Michael T. Hallett and
Lars Ailo Bongo},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Building Applications for Interactive Data Exploration in Systems
Biology},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {556--561},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107481},
doi = {10.1145/3107411.3107481},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/FjukstadDOLHB17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/FranciscoNV17,
author = {Alexandre P. Francisco and
Marta Nascimento and
C{\'{a}}tia Vaz},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Dynamic Phylogenetic Inference for Sequence-based Typing Data},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {604},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108214},
doi = {10.1145/3107411.3108214},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/FranciscoNV17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Garg17,
author = {Meera Garg},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Study of Antidepressant Molecular Structure Leading to Safer Dosing},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {575},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108179},
doi = {10.1145/3107411.3108179},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/Garg17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GhiasvandS17,
author = {Omid Ghiasvand and
Mary Shimoyama},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Novel Unsupervised Named Entity Recognition Used in Text Annotation
Tool (OntoMate) At Rat Genome Database},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {590},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108198},
doi = {10.1145/3107411.3108198},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/GhiasvandS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GuddantiHZHY17,
author = {Varshini Guddanti and
Shawn Horvatic and
Jie Zhou and
Yujia Hu and
Bing Ye},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {High Dimensional Ensemble Neuronal Activity Pattern Analysis: Visualization
and Wave Detection Focused},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {600},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108209},
doi = {10.1145/3107411.3108209},
timestamp = {Tue, 01 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/GuddantiHZHY17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Hall-SwanCNC17,
author = {Sarah Hall{-}Swan and
Jake Crawford and
Rebecca Newman and
Lenore J. Cowen},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Detangling {PPI} Networks to Uncover Functionally Meaningful Clusters},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {752--753},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3110409},
doi = {10.1145/3107411.3110409},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/Hall-SwanCNC17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HashemiZV17,
author = {Abolfazl Hashemi and
Banghua Zhu and
Haris Vikalo},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Sparse Tensor Decomposition for Haplotype Assembly of Diploids and
Polyploids},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {764--765},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3110417},
doi = {10.1145/3107411.3110417},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/HashemiZV17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HaspelSM17,
author = {Nurit Haspel and
Amarda Shehu and
Kevin Molloy},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {The 2017 Computational Structural Bioinformatics Workshop: {CSBW}
2017},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {643},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108166},
doi = {10.1145/3107411.3108166},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/HaspelSM17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HassanpourALH17,
author = {Neda Hassanpour and
Nicholas Alden and
Kyongbum Lee and
Soha Hassoun},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {An Advanced Workflow for Metabolite Annotation},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {582},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108189},
doi = {10.1145/3107411.3108189},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/HassanpourALH17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HassounH17,
author = {Soha Hassoun and
Curtis Huttenhower},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {A Workshop on Microbiomics, Metagenomics, and Metabolomics},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {776},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108172},
doi = {10.1145/3107411.3108172},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/HassounH17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HejasePBEL17,
author = {Hussein A. Hejase and
Natalie Vande Pol and
Gregory M. Bonito and
Patrick P. Edger and
Kevin J. Liu},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Coal-Miner: {A} Statistical Method for {GWA} Studies of Quantitative
Traits with Complex Evolutionary Origins},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {107--114},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107490},
doi = {10.1145/3107411.3107490},
timestamp = {Sun, 04 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/HejasePBEL17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HeliouBFB17,
author = {Am{\'{e}}lie H{\'{e}}liou and
Dominik Budday and
Rasmus Fonseca and
Henry van den Bedem},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Fast, Clash-Free {RNA} Conformational Morphing using Molecular Junctions},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {639},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107460},
doi = {10.1145/3107411.3107460},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/HeliouBFB17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HongLS17,
author = {Huixiao Hong and
Carmine Leggett and
Suguna Sakkiah},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Development of Nicotinic Acetylcholine Receptor nAChR {\(\alpha\)}7
Binding Activity Prediction Model: Coupling Machine Learning with
Competitive Molecular Docking},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {584},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108191},
doi = {10.1145/3107411.3108191},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/HongLS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HosnyZN17,
author = {Abdelrahman Hosny and
Fatima Zare and
Sheida Nabavi},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Varsimlab: {A} Docker-based Pipeline to Automatically Synthesize Short
Reads with Genomic Aberrations},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {581},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108188},
doi = {10.1145/3107411.3108188},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/HosnyZN17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HowtonP17,
author = {Jonathan Howton and
Joshua L. Phillips},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Computational Modeling of pH-dependent gp120-CD4 Interactions in Founder
and Chronic {HIV} Strains},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {644--649},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107506},
doi = {10.1145/3107411.3107506},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/HowtonP17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HuangWLZLZLZLZ17,
author = {Edward W. Huang and
Sheng Wang and
Bingxue Li and
Ran Zhang and
Baoyan Liu and
Runshun Zhang and
Jie Liu and
Xuezhong Zhou and
Hongsheng Lin and
ChengXiang Zhai},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {HEMnet: Integration of Electronic Medical Records with Molecular Interaction
Networks and Domain Knowledge for Survival Analysis},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {378--387},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107422},
doi = {10.1145/3107411.3107422},
timestamp = {Mon, 23 Dec 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/HuangWLZLZLZLZ17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HuyRN17,
author = {Huy Quang Pham and
Luis Rueda and
Alioune Ngom},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Predicting Breast Cancer Outcome under Different Treatments by Feature
Selection Approaches},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {617},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108226},
doi = {10.1145/3107411.3108226},
timestamp = {Wed, 08 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/HuyRN17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ImangaliyevL17,
author = {Sultan Imangaliyev and
Evgeni Levin},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Unsupervised Multi-View Feature Selection for Tumor Subtype Identification},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {491--499},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107413},
doi = {10.1145/3107411.3107413},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ImangaliyevL17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/IslamKCB17,
author = {S. M. Ashiqul Islam and
Christopher Michel Kearney and
Ankan Choudhury and
Erich J. Baker},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Protein Classification using Modified \emph{N-Gram} and \emph{Skip-Gram}
Models: Extended Abstract},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {586},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108193},
doi = {10.1145/3107411.3108193},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/IslamKCB17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/IslamPH17,
author = {Tunazzina Islam and
Michael Poteat and
Jing He},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Analysis of {\ss}-strand Twist from the 3-dimensional Image of a Protein},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {650--654},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107507},
doi = {10.1145/3107411.3107507},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/IslamPH17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/IvanZDYZK17,
author = {Fransiskus Xaverius Ivan and
Xinrui Zhou and
Akhila Deshpande and
Rui Yin and
Jie Zheng and
Chee Keong Kwoh},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Phylogenetic Tree based Method for Uncovering Co-mutational Site-pairs
in Influenza Viruses},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {21--26},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107479},
doi = {10.1145/3107411.3107479},
timestamp = {Wed, 17 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/IvanZDYZK17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/JacobsonDMMAT17,
author = {Bruna Jacobson and
Jon Christian L. David and
Mitchell C. Malone and
Kasra Manavi and
Susan R. Atlas and
Lydia Tapia},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Geometric Sampling Framework for Exploring Molecular Walker Energetics
and Dynamics},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {704--709},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107503},
doi = {10.1145/3107411.3107503},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/JacobsonDMMAT17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/JainD17,
author = {Yashita Jain and
Shanshan Ding},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Integrative Sufficient Dimension Reduction Methods for Multi-Omics
Data Analysis},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {616},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108225},
doi = {10.1145/3107411.3108225},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/JainD17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Jamil17,
author = {Hasan M. Jamil},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Knowledge Rich Natural Language Queries over Structured Biological
Databases},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {352--361},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107442},
doi = {10.1145/3107411.3107442},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/Jamil17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/JammulaCA17,
author = {Nagakishore Jammula and
Sriram P. Chockalingam and
Srinivas Aluru},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Distributed Memory Partitioning of High-Throughput Sequencing Datasets
for Enabling Parallel Genomics Analyses},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {417--424},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107491},
doi = {10.1145/3107411.3107491},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/JammulaCA17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/JiaoIRNDLIS17,
author = {Xiaoli Jiao and
Hiromi Imamichi and
Tauseef Rehman and
Rishub Nahar and
Robin L. Dewar and
H. Clifford Lane and
Tomozumi Imamichi and
Brad T. Sherman},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Self-Tuning Spectral Clustering for Full-length Viral Quasispecies
Reconstruction with PacBio Long Reads},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {587},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108194},
doi = {10.1145/3107411.3108194},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/JiaoIRNDLIS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/JohansenSSW17,
author = {Alexander Rosenberg Johansen and
Casper Kaae S{\o}nderby and
S{\o}ren Kaae S{\o}nderby and
Ole Winther},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Deep Recurrent Conditional Random Field Network for Protein Secondary
Prediction},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {73--78},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107489},
doi = {10.1145/3107411.3107489},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/JohansenSSW17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/JohnsonPCM17,
author = {Alistair E. W. Johnson and
Tom J. Pollard and
Leo A. Celi and
Roger G. Mark},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Analyzing the eICU Collaborative Research Database},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {631},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107494},
doi = {10.1145/3107411.3107494},
timestamp = {Sun, 25 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/JohnsonPCM17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/JuLWJYW17,
author = {Chelsea J.{-}T. Ju and
Ruirui Li and
Zhengliang Wu and
Jyun{-}Yu Jiang and
Zhao Yang and
Wei Wang},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Fleximer: Accurate Quantification of RNA-Seq via Variable-Length k-mers},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {263--272},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107444},
doi = {10.1145/3107411.3107444},
timestamp = {Mon, 06 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/JuLWJYW17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KahandaB17,
author = {Indika Kahanda and
Asa Ben{-}Hur},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {GOstruct 2.0: Automated Protein Function Prediction for Annotated
Proteins},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {60--66},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107417},
doi = {10.1145/3107411.3107417},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/KahandaB17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KarbalaygharehB17,
author = {Alireza Karbalayghareh and
Ulisses M. Braga{-}Neto and
Edward R. Dougherty},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Intrinsically Bayesian Robust Classifier for Single-Cell Gene Expression
Time Series in Gene Regulatory Networks},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {766--767},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3110408},
doi = {10.1145/3107411.3110408},
timestamp = {Fri, 24 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/KarbalaygharehB17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KatiyarMSHLDB17,
author = {Ashish Katiyar and
Anwoy Kumar Mohanty and
Chao Sima and
Jianping Hua and
Rosana Lopes and
Aniruddha Datta and
Michael L. Bittner},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {A Bayesian Approach to Determine the Composition of Heterogeneous
Cancer Tissue},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {773--774},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3110410},
doi = {10.1145/3107411.3110410},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/KatiyarMSHLDB17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KawamACSD17,
author = {Ahmad Al Kawam and
Mustafa Alshawaqfeh and
James J. Cai and
Erchin Serpedin and
Aniruddha Datta},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Simulating Variance Heterogeneity in Quantitative Genome Wide Association
Studies},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {762--763},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3110407},
doi = {10.1145/3107411.3110407},
timestamp = {Thu, 22 Sep 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/KawamACSD17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Kedaigle17,
author = {Amanda J. Kedaigle},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Network-based Interpretation of Diverse High-Throughput Datasets through
the Omics Integrator Software Package},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {640},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107461},
doi = {10.1145/3107411.3107461},
timestamp = {Sun, 02 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Kedaigle17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KhoYRS17,
author = {Soon Jye Kho and
Hima Bindu Yalamanchili and
Michael L. Raymer and
Amit P. Sheth},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {A Novel Approach for Classifying Gene Expression Data using Topic
Modeling},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {388--393},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107483},
doi = {10.1145/3107411.3107483},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/KhoYRS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KhudyakovMSZ17,
author = {Yury Khudyakov and
Ion I. Mandoiu and
Pavel Skums and
Alexander Zelikovsky},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {{CAME} 2017: 6th Workshop on Computational Advances in Molecular Epidemiology},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {775},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108168},
doi = {10.1145/3107411.3108168},
timestamp = {Fri, 27 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/KhudyakovMSZ17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KimKK17,
author = {Sora Kim and
Han Sang Kim and
Sangwoo Kim},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Neopepsee: Accurate Genome-level Prediction of Neoantigens by Harnessing
Sequence and Amino Acid Immunogenicity Information},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {589},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108196},
doi = {10.1145/3107411.3108196},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/KimKK17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KotlarTZCW17,
author = {Alex V. Kotlar and
Cristina E. Trevino and
Michael E. Zwick and
David J. Cutler and
Thomas S. Wingo},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {SeqAnt: Cloud-Based Whole-Genome Annotation and Search},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {621},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108231},
doi = {10.1145/3107411.3108231},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/KotlarTZCW17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KunduB17,
author = {Soumya Kundu and
Mukul S. Bansal},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Assessing the Impact of Uncertain Gene Tree Rooting on Phylogenetic
Reconciliation Using a Simulation Framework},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {612},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108221},
doi = {10.1145/3107411.3108221},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/KunduB17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KwonY17,
author = {Sunyoung Kwon and
Sungroh Yoon},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {DeepCCI: End-to-end Deep Learning for Chemical-Chemical Interaction
Prediction},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {203--212},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107451},
doi = {10.1145/3107411.3107451},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/KwonY17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LaiI17,
author = {Yi{-}Pin Lai and
Thomas R. Ioerger},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {A Compatibility Approach to Identify Recombination Breakpoints in
Bacterial and Viral Genomes},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {11--20},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107432},
doi = {10.1145/3107411.3107432},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/LaiI17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LeeKRODO17,
author = {Sangkyu Lee and
Sarah Kerns and
Barry Rosenstein and
Harry Ostrer and
Joseph O. Deasy and
Jung Hun Oh},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Preconditioned Random Forest Regression: Application to Genome-Wide
Study for Radiotherapy Toxicity Prediction},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {593},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108201},
doi = {10.1145/3107411.3108201},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/LeeKRODO17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiB17,
author = {Lei Li and
Mukul S. Bansal},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {An Integrated Reconciliation Framework for Domain, Gene, and Species
Level Evolution},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {611},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108220},
doi = {10.1145/3107411.3108220},
timestamp = {Tue, 12 Feb 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/LiB17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiDH17,
author = {Xinmeng Li and
James Van Deventer and
Soha Hassoun},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Towards the Design of Matrix Metalloproteinases {(MMP)} Antibody Sequences},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {624},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108234},
doi = {10.1145/3107411.3108234},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/LiDH17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiQX17,
author = {Yi Li and
Daniel Quang and
Xiaohui Xie},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Understanding Sequence Conservation With Deep Learning},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {400--406},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107425},
doi = {10.1145/3107411.3107425},
timestamp = {Thu, 04 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/LiQX17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiuCYZY17,
author = {Guangming Liu and
Bianfang Chai and
Kuo Yang and
Xuezhong Zhou and
Jian Yu},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Overlapping Functional Modules Detection in {PPI} Network with Pairwise
Constrained Nonnegative Matrix Tri-Factorization},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {756--757},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3110414},
doi = {10.1145/3107411.3110414},
timestamp = {Thu, 07 Nov 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/LiuCYZY17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiuH17,
author = {Linfeng Liu and
Soha Hassoun},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {A Tool for Predicting the Dark Side of Enzymes},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {622},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108232},
doi = {10.1145/3107411.3108232},
timestamp = {Tue, 02 Jul 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/LiuH17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiuKTB17,
author = {Dong Liu and
Anastasia I. Kousa and
Simon R. Tomlinson and
C. Clare Blackburn},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Notch Signaling Plays an Important Role in mTEC Specification during
Fetal Thymus Development},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {598},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108206},
doi = {10.1145/3107411.3108206},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/LiuKTB17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiuN17,
author = {Junfeng Liu and
Xia Ning},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Differential Compound Prioritization via Bi-Directional Selectivity
Push with Power},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {394--399},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107486},
doi = {10.1145/3107411.3107486},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/LiuN17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LoM17,
author = {Chieh Lo and
Radu Marculescu},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Inferring Microbial Interactions from Metagenomic Time-series Using
Prior Biological Knowledge},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {168--177},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107435},
doi = {10.1145/3107411.3107435},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/LoM17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LongZBCZ17,
author = {Jon B. Long and
Yingyuan Zhang and
Vladimir Brusic and
Lou Chitkushev and
Guanglan Zhang},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Antidote Application: An Educational System for Treatment of Common
Toxin Overdose},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {442--448},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107415},
doi = {10.1145/3107411.3107415},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/LongZBCZ17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LorenziRPDPR17,
author = {Fabiana Lorenzi and
Rodrigo G. da Rosa and
Alessandra Peres and
Gilson Pires Dorneles and
Andr{\'{e}} Peres and
Francesco Ricci},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Tailoring Training for Obese Individuals with Case-Based Reasoning},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {142--147},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107467},
doi = {10.1145/3107411.3107467},
timestamp = {Mon, 15 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/LorenziRPDPR17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MahadikW0BC17,
author = {Kanak Mahadik and
Christopher Wright and
Milind Kulkarni and
Saurabh Bagchi and
Somali Chaterji},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Scalable Genomic Assembly through Parallel \emph{de Bruijn} Graph
Construction for Multiple K-mers},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {425--431},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107482},
doi = {10.1145/3107411.3107482},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/MahadikW0BC17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MalikP17,
author = {Laraib Malik and
Rob Patro},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Rich Chromatin Structure Prediction from Hi-C Data},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {184--193},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107448},
doi = {10.1145/3107411.3107448},
timestamp = {Tue, 03 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/MalikP17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MallUKDBC17,
author = {Raghvendra Mall and
Ehsan Ullah and
Khalid Kunji and
Fulvio D'Angelo and
Halima Bensmail and
Michele Ceccarelli},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Differential Community Detection in Paired Biological Networks},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {330--339},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107418},
doi = {10.1145/3107411.3107418},
timestamp = {Mon, 15 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/MallUKDBC17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ManaviTT17,
author = {Kasra Manavi and
Sahba Tashakkori and
Lydia Tapia},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Gaussian Mixture Models with Constrained Flexibility for Fitting Tomographic
Tilt Series},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {710--715},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107504},
doi = {10.1145/3107411.3107504},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ManaviTT17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MangalakumarAHR17,
author = {Naveen Mangalakumar and
Abed Alkhateeb and
Huy Quang Pham and
Luis Rueda and
Alioune Ngom},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Outlier Genes as Biomarkers of Breast Cancer Survivability in Time-Series
Data},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {594},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108202},
doi = {10.1145/3107411.3108202},
timestamp = {Sun, 04 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/MangalakumarAHR17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MarkinE17,
author = {Alexey Markin and
Oliver Eulenstein},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Cophenetic Median Trees Under the Manhattan Distance},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {194--202},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107443},
doi = {10.1145/3107411.3107443},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/MarkinE17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MasonWCJ17,
author = {Stephanie Mason and
Tim Woods and
Brian Y. Chen and
Filip Jagodzinski},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Investigating Rigidity Properties of Protein Cavities},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {698--703},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107502},
doi = {10.1145/3107411.3107502},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/MasonWCJ17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MatlockNRGP17,
author = {Kevin Matlock and
Carlos De Niz and
Raziur Rahman and
Souparno Ghosh and
Ranadip Pal},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Investigation of Model Stacking for Drug Sensitivity Prediction},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {772},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3110413},
doi = {10.1145/3107411.3110413},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/MatlockNRGP17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MetwallyAARDFFP17,
author = {Ahmed Metwally and
Christian Ascoli and
Kalista Andropolis and
Ravi Ranjan and
Yang Dai and
Thomas Ferkol and
Patricia W. Finn and
David L. Perkins},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Microbiome Dynamics as Predictors of Lung Transplant Rejection},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {619},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108229},
doi = {10.1145/3107411.3108229},
timestamp = {Wed, 08 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/MetwallyAARDFFP17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MetwallyFDP17,
author = {Ahmed A. Metwally and
Patricia W. Finn and
Yang Dai and
David L. Perkins},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Detection of Differential Abundance Intervals in Longitudinal Metagenomic
Data Using Negative Binomial Smoothing Spline {ANOVA}},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {295--304},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107429},
doi = {10.1145/3107411.3107429},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/MetwallyFDP17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MiannayMRMG17,
author = {Bertrand Miannay and
St{\'{e}}phane Minvielle and
Olivier Roux and
Florence Magrangeas and
Carito Guziolowski},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Constraints On Signaling Networks Logic Reveal Functional Subgraphs
On Multiple Myeloma {OMIC} Data},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {768--769},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3110411},
doi = {10.1145/3107411.3110411},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/MiannayMRMG17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MolloyMS17,
author = {Kevin Molloy and
David Morris and
Amarda Shehu},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {{ACM-BCB} '17 Tutorial: Robotics-inspired Algorithms for Modeling
Protein Structures and Motions},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {628},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107493},
doi = {10.1145/3107411.3107493},
timestamp = {Thu, 25 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/MolloyMS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MoonE17,
author = {Jucheol Moon and
Oliver Eulenstein},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Synthesizing Species Trees from Unrooted Gene Trees: {A} Parameterized
Approach},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {253--262},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107450},
doi = {10.1145/3107411.3107450},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/MoonE17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MulasZSGMTLJCHS17,
author = {Francesca Mulas and
Chun Zeng and
Yinghui Sui and
Tiffany Guan and
Nathanael Miller and
Yuliang Tan and
Fenfen Liu and
Wen Jin and
Andrea C. Carrano and
Mark O. Huising and
Orian Shirihai and
Gene W. Yeo and
Maike Sander},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Analysis of Single Cells on a Pseudotime Scale along Postnatal Pancreatic
Beta Cell Development},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {637},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107458},
doi = {10.1145/3107411.3107458},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/MulasZSGMTLJCHS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Murphy17,
author = {Shawn N. Murphy},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Instrumenting the Health Care Enterprise for Discovery in the Course
of Clinical Care},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {632},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3121000},
doi = {10.1145/3107411.3121000},
timestamp = {Fri, 12 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Murphy17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MushtaqLCLHA17,
author = {Hamid Mushtaq and
Frank Liu and
Carlos Costa and
Gang Liu and
H. Peter Hofstee and
Zaid Al{-}Ars},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {SparkGA: {A} Spark Framework for Cost Effective, Fast and Accurate
{DNA} Analysis at Scale},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {148--157},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107438},
doi = {10.1145/3107411.3107438},
timestamp = {Wed, 28 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/MushtaqLCLHA17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Ni0WJ17,
author = {Yang Ni and
Peter M{\"{u}}ller and
Lin Wei and
Yuan Ji},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Bayesian Graphical Models for Computational Network Biology},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {751},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3110405},
doi = {10.1145/3107411.3110405},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/Ni0WJ17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/NiYNMX17,
author = {Zhaoheng Ni and
Ahmet Cem Yuksel and
Xiuyan Ni and
Michael I. Mandel and
Lei Xie},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Confused or not Confused?: Disentangling Brain Activity from {EEG}
Data Using Bidirectional {LSTM} Recurrent Neural Networks},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {241--246},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107513},
doi = {10.1145/3107411.3107513},
timestamp = {Fri, 04 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/NiYNMX17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/NissensonS17,
author = {Michael Nissenson and
Dong Si},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Automated Protein Chain Isolation from 3D Cryo-EM Data and Volume
Comparison Tool},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {685--690},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107500},
doi = {10.1145/3107411.3107500},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/NissensonS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ObertiV17,
author = {Mauricio Oberti and
Iosif I. Vaisman},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Identification and Prediction of Intrinsically Disordered Regions
in Proteins Using n-grams},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {67--72},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107480},
doi = {10.1145/3107411.3107480},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ObertiV17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Okomo-AdhiamboR17,
author = {Margaret Okomo{-}Adhiambo and
Edward Ramos and
Reagan Kelly and
Yatish Jain and
Roman L. Tatusov and
Anna Montmayeur and
Gregory Doho and
Rachel L. Marine and
Terry Fei Fan Ng and
Adam Retchless and
Steve Oberste and
Paul Rota and
Xin Wang and
Agha N. Khan},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Automated Next Generation Sequencing Bioinformatics Pipelines for
Pathogen Discovery and Surveillance},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {585},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108192},
doi = {10.1145/3107411.3108192},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Okomo-AdhiamboR17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Orenstein17,
author = {Yaron Orenstein},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Computational Modeling of Protein-RNA Interactions},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {629},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107495},
doi = {10.1145/3107411.3107495},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/Orenstein17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/OthmanRTKDV17,
author = {Manal Othman and
Sujay Ratna and
Anant Tewari and
Anthony M. Kang and
Katherine Du and
Iosif I. Vaisman},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Classification and Prediction of Antimicrobial Peptides Using N-gram
Representation and Machine Learning},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {605},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108215},
doi = {10.1145/3107411.3108215},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/OthmanRTKDV17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ParkCSRLO17,
author = {Zewon Park and
Ko{-}Woon Choi and
Doo Won Seo and
Sunae Ryu and
Jong Gu Lee and
Woo Yong Oh},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Genome-Wide Association Study {(GWAS)} for the Infliximab Responsiveness
in Korean Inflammatory Bowel Disease Patients},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {608--609},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108218},
doi = {10.1145/3107411.3108218},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ParkCSRLO17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ParkHS17,
author = {Jisoo Park and
Benjamin J. Hescott and
Donna K. Slonim},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Building a Molecular Taxonomy of Disease},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {626},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108236},
doi = {10.1145/3107411.3108236},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ParkHS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/PaulLA17,
author = {Alexander J. Paul and
Dylan Lawrence and
Tae{-}Hyuk Ahn},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Overlap Graph Reduction for Genome Assembly using Apache Spark},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {613},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108222},
doi = {10.1145/3107411.3108222},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/PaulLA17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/PlataniaSYZLP17,
author = {Richard Platania and
Shayan Shams and
Seungwon Yang and
Jian Zhang and
Kisung Lee and
Seung{-}Jong Park},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Automated Breast Cancer Diagnosis Using Deep Learning and Region of
Interest Detection {(BC-DROID)}},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {536--543},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107484},
doi = {10.1145/3107411.3107484},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/PlataniaSYZLP17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/PorokhinLH17,
author = {Vladimir Porokhin and
Xinmeng Li and
Soha Hassoun},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Pathway Enrichment Analysis for Untargeted Metabolomics},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {623},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108233},
doi = {10.1145/3107411.3108233},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/PorokhinLH17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/PourD17,
author = {Ali Foroughi Pour and
Lori A. Dalton},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Integrating Prior Information with Bayesian Feature Selection},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {610},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108219},
doi = {10.1145/3107411.3108219},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/PourD17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/PourD17a,
author = {Ali Foroughi Pour and
Lori A. Dalton},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Heuristic Algorithms for Feature Selection under Bayesian Models with
Block-diagonal Covariance Structure},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {758--759},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3110412},
doi = {10.1145/3107411.3110412},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/PourD17a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/QiaoMPS17,
author = {Wanli Qiao and
Tatiana Maximova and
Erion Plaku and
Amarda Shehu},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Statistical Analysis of Computed Energy Landscapes to Understand Dysfunction
in Pathogenic Protein Variants},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {679--684},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107499},
doi = {10.1145/3107411.3107499},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/QiaoMPS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/QuitadamoJS17,
author = {Andrew Quitadamo and
James Johnson and
Xinghua Shi},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Bayesian Hyperparameter Optimization for Machine Learning Based eQTL
Analysis},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {98--106},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107434},
doi = {10.1145/3107411.3107434},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/QuitadamoJS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/RastegariA17,
author = {Elham Rastegari and
Hesham H. Ali},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {A Correlation Network Model Utilizing Gait Parameters for Evaluating
Health Levels},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {568--574},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107487},
doi = {10.1145/3107411.3107487},
timestamp = {Fri, 11 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/RastegariA17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/RayW17,
author = {Soumi Ray and
Adam Wright},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Applying Bayesian Changepoint Model and Hierarchical Divisive Model
for Detecting Anomalies in Clinical Decision Support Alert Firing},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {592},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108200},
doi = {10.1145/3107411.3108200},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/RayW17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Ringe17,
author = {Dagmar Ringe},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Challenges of Drug Design},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {633},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107464},
doi = {10.1145/3107411.3107464},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/Ringe17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/RossettoZ17,
author = {Allison M. Rossetto and
Wenjin Zhou},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Ensemble Convolution Neural Network with a Simple Voting Method for
Lung Tumor Detection},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {729--734},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108174},
doi = {10.1145/3107411.3108174},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/RossettoZ17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/SaeediSG17,
author = {Ramyar Saeedi and
Keyvan Sasani and
Assefaw Hadish Gebremedhin},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Co-MEAL: Cost-Optimal Multi-Expert Active Learning Architecture for
Mobile Health Monitoring},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {432--441},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107430},
doi = {10.1145/3107411.3107430},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/SaeediSG17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/SaizM17,
author = {Brandon A. Saiz and
Padmanabhan Mahadevan},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Prokaryotic Autolysin Database Construction},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {578},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108183},
doi = {10.1145/3107411.3108183},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/SaizM17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Salinas017,
author = {Sergio Salinas and
Pan Li},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Secure Cloud Computing for Pairwise Sequence Alignment},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {178--183},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107477},
doi = {10.1145/3107411.3107477},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Salinas017.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/SantosCHB17,
author = {Hannah De Los Santos and
Emily J. Collins and
Jennifer M. Hurley and
Kristin P. Bennett},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Circadian Rhythms in \emph{Neurospora} Exhibit Biologically Relevant
Driven and Damped Harmonic Oscillations},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {455--463},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107420},
doi = {10.1145/3107411.3107420},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/SantosCHB17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/SapinJS17,
author = {Emmanuel Sapin and
Kenneth A. De Jong and
Amarda Shehu},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Evolving Conformation Paths to Model Protein Structural Transitions},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {673--678},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107498},
doi = {10.1145/3107411.3107498},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/SapinJS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ShaW17,
author = {Ying Sha and
May D. Wang},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Interpretable Predictions of Clinical Outcomes with An Attention-based
Recurrent Neural Network},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {233--240},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107445},
doi = {10.1145/3107411.3107445},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ShaW17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ShehuKP17,
author = {Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Highlights Talks at {ACM} {BCB} 2017},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {635},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3121406},
doi = {10.1145/3107411.3121406},
timestamp = {Fri, 25 Aug 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ShehuKP17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/SilvaDH17,
author = {Nisansa de Silva and
Dejing Dou and
Jingshan Huang},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Discovering Inconsistencies in PubMed Abstracts through Ontology-Based
Information Extraction},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {362--371},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107452},
doi = {10.1145/3107411.3107452},
timestamp = {Mon, 16 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/SilvaDH17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/StanfieldCK17,
author = {Zachary Stanfield and
Mustafa Coskun and
Mehmet Koyut{\"{u}}rk},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Drug Response Prediction as a Link Prediction Problem},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {638},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107459},
doi = {10.1145/3107411.3107459},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/StanfieldCK17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/StrombergRLJLM17,
author = {Michael Str{\"{o}}mberg and
Rajat Roy and
Julien Lajugie and
Yu Jiang and
Haochen Li and
Elliott H. Margulies},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Nirvana: Clinical Grade Variant Annotator},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {596},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108204},
doi = {10.1145/3107411.3108204},
timestamp = {Tue, 21 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/StrombergRLJLM17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/SudermanH17,
author = {Ryan Suderman and
William S. Hlavacek},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {TRuML: {A} Translator for Rule-Based Modeling Languages},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {372--377},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107471},
doi = {10.1145/3107411.3107471},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/SudermanH17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/TablAEN17,
author = {Ashraf Abou Tabl and
Abed Alkhateeb and
Waguih H. ElMaraghy and
Alioune Ngom},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Machine Learning Model for Identifying Gene Biomarkers for Breast
Cancer Treatment Survival},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {607},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108217},
doi = {10.1145/3107411.3108217},
timestamp = {Sun, 04 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/TablAEN17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/TangRWM17,
author = {Shaojun Tang and
Suthee Rapisuwon and
Anton Wellstein and
Subha Madhavan},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Tumor Neoantigens Derived from {RNA} Sequencing Analysis},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {601},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108210},
doi = {10.1145/3107411.3108210},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/TangRWM17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ToroPR17,
author = {Le{\'{o}}n F. Toro and
Laura Pinilla{-}Mendoza and
Rigoberto R{\'{\i}}os{-}Estepa},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Streptomyces Clavuligerus Constraint-Based Modeling and Gene Expression
Analysis for Clavulanic Acid Production},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {597},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108205},
doi = {10.1145/3107411.3108205},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ToroPR17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/TrieuC17,
author = {Tuan Trieu and
Jianlin Cheng},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {3D Genome Structure Modeling by Lorentzian Objective Function},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {641},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107455},
doi = {10.1145/3107411.3107455},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/TrieuC17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/VallianiS17,
author = {Aly Valliani and
Ameet Soni},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Deep Residual Nets for Improved Alzheimer's Diagnosis},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {615},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108224},
doi = {10.1145/3107411.3108224},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/VallianiS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WangLPMT17,
author = {Xuefu Wang and
Sujun Li and
Wenjing Peng and
Yehia Mechref and
Haixu Tang},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {A Sparse Latent Regression Approach for Integrative Analysis of Glycomic
and Glycotranscriptomic Data},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {273--278},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107468},
doi = {10.1145/3107411.3107468},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/WangLPMT17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WangLRWSLL17,
author = {Yanshan Wang and
Sijia Liu and
Majid Rastegar{-}Mojarad and
Liwei Wang and
Feichen Shen and
Fei Liu and
Hongfang Liu},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Dependency and {AMR} Embeddings for Drug-Drug Interaction Extraction
from Biomedical Literature},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {36--43},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107426},
doi = {10.1145/3107411.3107426},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/WangLRWSLL17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WangWLB17,
author = {Zi Wang and
Dali Wang and
Husheng Li and
Zhirong Bao},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Cell Neighbor Determination in the Metazoan Embryo System},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {305--312},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107465},
doi = {10.1145/3107411.3107465},
timestamp = {Thu, 17 Nov 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/WangWLB17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Warnow17,
author = {Tandy J. Warnow},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Genome-scale Estimation of the Tree of Life},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {634},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107463},
doi = {10.1145/3107411.3107463},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/Warnow17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WuW17,
author = {Hang Wu and
May D. Wang},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Infer Cause of Death for Population Health Using Convolutional Neural
Network},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {526--535},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107447},
doi = {10.1145/3107411.3107447},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/WuW17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Xu17,
author = {Jinbo Xu},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Folding Large Proteins by Ultra-Deep Learning},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {642},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107456},
doi = {10.1145/3107411.3107456},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/Xu17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/XuQYZC17,
author = {Easton Li Xu and
Xiaoning Qian and
Qilian Yu and
Han Zhang and
Shuguang Cui},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Feature Selection with Interactions in Logistic Regression Models
using Multivariate Synergies for a {GWAS} Application},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {760--761},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3110406},
doi = {10.1145/3107411.3110406},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/XuQYZC17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/YallapragadaV17,
author = {Uday Yallapragada and
Iosif I. Vaisman},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Network Analysis of Correlated Mutations in Influenza},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {627},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108237},
doi = {10.1145/3107411.3108237},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/YallapragadaV17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/YanamalaOKBZRCE17,
author = {Naveena Yanamala and
Marlene S. Orandle and
Vamsi K. Kodali and
Lindsey M. Bishop and
Patti C. Zeidler{-}Erdely and
Jenny R. Roberts and
Vincent Castranova and
Aaron D. Erdely},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Supervised Machine Learning Approaches Predict and Characterize Nanomaterial
Exposures: {MWCNT} Markers in Lung Lavage Fluid},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {576},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108181},
doi = {10.1145/3107411.3108181},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/YanamalaOKBZRCE17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/YaoLSWR17,
author = {Yao Yao and
Zheng Liu and
Satpreet Singh and
Qi Wei and
Stephen A. Ramsey},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {{CERENKOV:} Computational Elucidation of the Regulatory Noncoding
Variome},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {79--88},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107414},
doi = {10.1145/3107411.3107414},
timestamp = {Tue, 12 Dec 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/YaoLSWR17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/YeganehM17,
author = {Pourya Naderi Yeganeh and
M. Taghi Mostafavi},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Use of Structural Properties of Underlying Graphs in Pathway Enrichment
Analysis of Genomic Data},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {279--284},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107488},
doi = {10.1145/3107411.3107488},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/YeganehM17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/YoonQK17,
author = {Byung{-}Jun Yoon and
Xiaoning Qian and
Tamer Kahveci},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {CNB-MAC'17: The Fourth International Workshop on Computational Network
Biology: Modeling, Analysis, and Control},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {750},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108167},
doi = {10.1145/3107411.3108167},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/YoonQK17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/YoussefR17,
author = {Ibrahim Youssef and
Anna M. Ritz},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Breaking Ties in Weighted Interactomes},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {618},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108228},
doi = {10.1145/3107411.3108228},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/YoussefR17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/YuanXJZ17,
author = {Ye Yuan and
Guangxu Xun and
Kebin Jia and
Aidong Zhang},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {A Multi-view Deep Learning Method for Epileptic Seizure Detection
using Short-time Fourier Transform},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {213--222},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107419},
doi = {10.1145/3107411.3107419},
timestamp = {Fri, 19 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/YuanXJZ17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZareANN17,
author = {Fatima Zare and
Sardar Ansari and
Kayvan Najarian and
Sheida Nabavi},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Bias and Noise Cancellation for Robust Copy Number Variation Detection},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {591},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108199},
doi = {10.1145/3107411.3108199},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ZareANN17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhangS17,
author = {Qichun Zhang and
Francisco Sepulveda},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {RBFNN-based Modelling and Analysis for the Signal Reconstruction of
Peripheral Nerve Tissue},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {474--479},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107478},
doi = {10.1145/3107411.3107478},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ZhangS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhangYFYTG17,
author = {Hao Zhang and
Mary Qu Yang and
Xiaoyue Feng and
William Yang and
Weida Tong and
Renchu Guan},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Protein-Protein Interaction Extraction Using Attention-Based Convolution
Neural Networks},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {770--771},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3110418},
doi = {10.1145/3107411.3110418},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ZhangYFYTG17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhaoY17,
author = {Mengnan Zhao and
Christopher C. Yang},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Automated Off-label Drug Use Detection from User Generated Content},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {449--454},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107475},
doi = {10.1145/3107411.3107475},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ZhaoY17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhbannikovA17,
author = {Ilya Y. Zhbannikov and
Konstantin G. Arbeev},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Stochastic Process Model and Its Applications to Analysis of Longitudinal
Data},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {630},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107496},
doi = {10.1145/3107411.3107496},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ZhbannikovA17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhbannikovHFS17,
author = {Ilya Y. Zhbannikov and
Samuel S. Hunter and
James A. Foster and
Matthew L. Settles},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {SeqyClean: {A} Pipeline for High-throughput Sequence Data Preprocessing},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {407--416},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107446},
doi = {10.1145/3107411.3107446},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ZhbannikovHFS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhouJMC17,
author = {Chongyu Zhou and
Yao Jia and
Mehul Motani and
Jingwei Chew},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Learning Deep Representations from Heterogeneous Patient Data for
Predictive Diagnosis},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {115--123},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107433},
doi = {10.1145/3107411.3107433},
timestamp = {Tue, 19 Nov 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ZhouJMC17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhouKHLS17,
author = {He Zhou and
Sunil P. Khatri and
Jiang Hu and
Frank Liu and
Cliff C. N. Sze},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Fast and Highly Scalable Bayesian {MDP} on a {GPU} Platform},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {158--167},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107440},
doi = {10.1145/3107411.3107440},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ZhouKHLS17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhuE17,
author = {Lu Zhu and
Martin Ester},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Bayesian Collective Markov Random Fields for Subcellular Localization
Prediction of Human Proteins},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {321--329},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107412},
doi = {10.1145/3107411.3107412},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ZhuE17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZorziCPM17,
author = {Margherita Zorzi and
Carlo Combi and
Gabriele Pozzani and
Ugo Moretti},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Mapping Free Text into MedDRA by Natural Language Processing: {A}
Modular Approach in Designing and Evaluating Software Extensions},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {27--35},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3107431},
doi = {10.1145/3107411.3107431},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ZorziCPM17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZouZCP17,
author = {Wen Zou and
Weizhong Zhao and
James J. Chen and
Roger Perkins},
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Best Setting of Model Parameters in Applying Topic Modeling on Textual
Documents},
booktitle = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
pages = {588},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3107411.3108195},
doi = {10.1145/3107411.3108195},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ZouZCP17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/bcb/2017,
editor = {Nurit Haspel and
Lenore J. Cowen and
Amarda Shehu and
Tamer Kahveci and
Giuseppe Pozzi},
title = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2017, Boston,
MA, USA, August 20-23, 2017},
publisher = {{ACM}},
year = {2017},
url = {http://dl.acm.org/citation.cfm?id=3107411},
isbn = {978-1-4503-4722-8},
timestamp = {Fri, 18 Aug 2017 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/2017.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/0002RTLR16,
author = {Paul D. Martin and
Michael Rushanan and
Thomas Tantillo and
Christoph U. Lehmann and
Aviel D. Rubin},
title = {Applications of Secure Location Sensing in Healthcare},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {58--67},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2975173},
doi = {10.1145/2975167.2975173},
timestamp = {Tue, 06 Nov 2018 16:59:10 +0100},
biburl = {https://dblp.org/rec/conf/bcb/0002RTLR16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AbarCRK16,
author = {Orhan Abar and
Richard J. Charnigo and
Abner Rayapati and
Ramakanth Kavuluru},
title = {On Interestingness Measures for Mining Statistically Significant and
Novel Clinical Associations from EMRs},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {587--594},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2985843},
doi = {10.1145/2975167.2985843},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/AbarCRK16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AgrawalHGSSC16,
author = {Surabhi Agrawal and
Chun Pan Hon and
Swati Garg and
Aadarsh Sampath and
Shanu Sushmita and
Martine De Cock},
title = {Sequence Based Prediction of Hospital Readmissions},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {489--490},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2985647},
doi = {10.1145/2975167.2985647},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/AgrawalHGSSC16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AhsanPB16,
author = {Faizy Ahsan and
Doina Precup and
Mathieu Blanchette},
title = {Prediction of Cell Type Specific Transcription Factor Binding Site
Occupancy},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {497--498},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2985652},
doi = {10.1145/2975167.2985652},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/AhsanPB16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AhsenBSMLMWV16,
author = {Mehmet Eren Ahsen and
Todd P. Boren and
Nitin K. Singh and
Burook Misganaw and
Jayanthi S. Lea and
David S. Miller and
Michael A. White and
Mathukumalli Vidyasagar},
title = {Sparse Feature Selection for Classification and Prediction of Metastasis
in Endometrial Cancer: Extended Abstract},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {522--524},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2985667},
doi = {10.1145/2975167.2985667},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/AhsenBSMLMWV16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AlamCW16,
author = {Md. Ashad Alam and
Vince D. Calhoun and
Yu{-}Ping Wang},
title = {Influence Function of Multiple Kernel Canonical Analysis to Identify
Outliers in Imaging Genetics Data},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {210--219},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2975189},
doi = {10.1145/2975167.2975189},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/AlamCW16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AlamKCW16,
author = {Md. Ashad Alam and
Osamu Komori and
Vince D. Calhoun and
Yu{-}Ping Wang},
title = {Robust Kernel Canonical Correlation Analysis to Detect Gene-Gene Interaction
for Imaging Genetics Data},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {279--288},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2975196},
doi = {10.1145/2975167.2975196},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/AlamKCW16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AlshawaqfehYS16,
author = {Mustafa Alshawaqfeh and
Ahmad Bani Younes and
Erchin Serpedin},
title = {Inferring Microbial Interaction Networks from Metagenomic Data Using
SgLV-EKF Algorithm},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {528},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2985670},
doi = {10.1145/2975167.2985670},
timestamp = {Thu, 22 Sep 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/AlshawaqfehYS16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AlshehriRAR16,
author = {Manal Alshehri and
Iman Rezaeian and
Abed Alkhateeb and
Luis Rueda},
title = {A Machine Learning Model for Discovery of Protein Isoforms as Biomarkers},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {474--475},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2985638},
doi = {10.1145/2975167.2985638},
timestamp = {Sun, 04 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/AlshehriRAR16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AnandakrishnanD16,
author = {Ramu Anandakrishnan and
Mayank Daga and
Alexey Onufriev and
Wu{-}chun Feng},
title = {Multiscale Approximation with Graphical Processing Units for Multiplicative
Speedup in Molecular Dynamics},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {453--462},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2975214},
doi = {10.1145/2975167.2975214},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/AnandakrishnanD16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ArshadD16,
author = {Osama A. Arshad and
Aniruddha Datta},
title = {Towards targeted combinatorial therapy design for the treatment of
castration-resistant prostate cancer},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {529},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2985671},
doi = {10.1145/2975167.2985671},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ArshadD16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AshishPCT16,
author = {Naveen Ashish and
Arihant Patawari and
Simrat Singh Chhabra and
Arthur W. Toga},
title = {Name Similarity for Composite Element Name Matching},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {345--354},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2975203},
doi = {10.1145/2975167.2975203},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/AshishPCT16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AyatiWSNCK16,
author = {Marzieh Ayati and
Danica Wiredja and
Daniela Schlatzer and
Goutham Narla and
Mark R. Chance and
Mehmet Koyut{\"{u}}rk},
title = {MoBaS on Phosphorylation Data},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {521},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2995267},
doi = {10.1145/2975167.2995267},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/AyatiWSNCK16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BagherzadiBTCM16,
author = {Negin Bagherzadi and
Alp Ozgun Borcek and
G{\"{u}}l Tokdemir and
Nergiz Ercil Cagiltay and
H. Hakan Maras},
title = {Analysis of Neurooncological Data to Predict Success of Operation
Through Classification},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {485--486},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2985645},
doi = {10.1145/2975167.2985645},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/BagherzadiBTCM16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BaiBN16,
author = {Wenruo Bai and
Jeffrey A. Bilmes and
William S. Noble},
title = {Bipartite matching generalizations for peptide identification in tandem
mass spectrometry},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {327--336},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2975201},
doi = {10.1145/2975167.2975201},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/BaiBN16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BanerjeeRL16,
author = {Jeet Banerjee and
Tanvi Ranjan and
Ritwik Kumar Layek},
title = {Stability Analysis of Population Dynamics Model in Microbial Biofilms
with Non-participating Strains},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {220--230},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2975190},
doi = {10.1145/2975167.2975190},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/BanerjeeRL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BatemanTP16,
author = {Amelia Bateman and
Todd J. Treangen and
Mihai Pop},
title = {Limitations of Current Approaches for Reference-Free, Graph-Based
Variant Detection},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {499--500},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2985653},
doi = {10.1145/2975167.2985653},
timestamp = {Mon, 15 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/BatemanTP16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BridgesHHWG16,
author = {Ryan Bridges and
Jette Henderson and
Joyce C. Ho and
Byron C. Wallace and
Joydeep Ghosh},
title = {Automated Verification of Phenotypes using PubMed},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {595--602},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2985844},
doi = {10.1145/2975167.2985844},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/BridgesHHWG16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/CaninoSGTZV16,
author = {Giovanni Canino and
Qiuling Suo and
Pietro Hiram Guzzi and
Giuseppe Tradigo and
Aidong Zhang and
Pierangelo Veltri},
title = {Feature Selection Model for Diagnosis, Electronic Medical Records
and Geographical Data Correlation},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {616--621},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2985847},
doi = {10.1145/2975167.2985847},
timestamp = {Wed, 25 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/CaninoSGTZV16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Caoili16,
author = {Salvador Eugenio C. Caoili},
title = {Kinetic and Affinity Constraints on Reactions Between Antihapten Antibodies
and Nonpeptidic B-Cell Epitopes: Implications for Predicting Antibody-Mediated
Modulation of Pharmacokinetics and Pharmacodynamics},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {481--482},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2985643},
doi = {10.1145/2975167.2985643},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/Caoili16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChandrasekaranK16,
author = {Sai Nivedita Chandrasekaran and
Alexios Koutsoukas and
Jun Huan},
title = {Investigating Multiview and Multitask Learning Frameworks for Predicting
Drug-Disease Associations},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {138--145},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2975181},
doi = {10.1145/2975167.2975181},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ChandrasekaranK16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChaturvediGKLMS16,
author = {Mmanu Chaturvedi and
Tomojit Ghosh and
Michael Kirby and
Xiaoyu Liu and
Xiaofeng Ma and
Shannon Stiverson},
title = {Explorations in Very Early Prognosis of the Human Immune Response
to Influenza},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {562--570},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2985686},
doi = {10.1145/2975167.2985686},
timestamp = {Sun, 04 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ChaturvediGKLMS16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChenLWC16,
author = {Minghan Chen and
Fei Li and
Shuo Wang and
Yang Cao},
title = {Stochastic Modeling and Simulation of Reaction-Diffusion System with
Hill Function Dynamics},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {525--526},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2985668},
doi = {10.1145/2975167.2985668},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ChenLWC16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChengSJHS16,
author = {Qian Cheng and
Jingbo Shang and
Joshua Juen and
Jiawei Han and
Bruce R. Schatz},
title = {Mining Discriminative Patterns to Predict Health Status for Cardiopulmonary
Patients},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {41--49},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2975171},
doi = {10.1145/2975167.2975171},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ChengSJHS16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChengSW16,
author = {Chihwen Cheng and
Ying Sha and
May D. Wang},
title = {InterVisAR: An Interactive Visualization for Association Rule Search},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {175--184},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2975185},
doi = {10.1145/2975167.2975185},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ChengSW16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChoudhuryCE16,
author = {Olivia Choudhury and
Ankush Chakrabarty and
Scott J. Emrich},
title = {HAPI-Gen: Highly Accurate Phasing and Imputation of Genotype Data},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {78--87},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2975175},
doi = {10.1145/2975167.2975175},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ChoudhuryCE16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChuaBZT16,
author = {Huey{-}Eng Chua and
Sourav S. Bhowmick and
Jie Zheng and
Lisa Tucker{-}Kellogg},
title = {{TAPESTRY:} Network-centric Target Prioritization in Disease-related
Signaling Networks},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {108--117},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2975178},
doi = {10.1145/2975167.2975178},
timestamp = {Thu, 02 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ChuaBZT16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/DazaMGBTC16,
author = {Claudio Daza and
Josefa Santa Maria and
Ignacio G{\'{o}}mez and
Mario Barbe and
Javier Trincado and
Daniel Capurro},
title = {Phenotyping Intensive Care Unit Patients Using Temporal Abstractions
and Temporal Pattern Matching},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {508--509},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2985658},
doi = {10.1145/2975167.2985658},
timestamp = {Sun, 06 Oct 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/DazaMGBTC16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/DeBlasioK16,
author = {Dan F. DeBlasio and
John D. Kececioglu},
title = {Adaptive Local Realignment via Parameter Advising},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {510--511},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2985659},
doi = {10.1145/2975167.2985659},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/DeBlasioK16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/DehghannasiriED16,
author = {Roozbeh Dehghannasiri and
Mohammad Shahrokh Esfahani and
Edward R. Dougherty},
title = {Inference of Nonlinear ODE-Based Gene Regulatory Networks via Intrinsically
Bayesian Robust Kalman Filtering},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {542--543},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2985681},
doi = {10.1145/2975167.2985681},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/DehghannasiriED16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/EsfahaniNSTDA16,
author = {Mohammad Shahrokh Esfahani and
Aaron M. Newman and
Florian Scherer and
Robert Tibshirani and
Maximilian Diehn and
Ash A. Alizadeh},
title = {Noninvasive Cancer Classification Using Diverse Genomic Features in
Circulating Tumor {DNA}},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {516},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2985663},
doi = {10.1145/2975167.2985663},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/EsfahaniNSTDA16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/EzellR16,
author = {Nicole Ezell and
Anna M. Ritz},
title = {Reconstructing Neuronal Signaling Pathways With the Potential for
Disruption in Schizophrenia},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {514--515},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2985662},
doi = {10.1145/2975167.2985662},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/EzellR16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GhersiS16,
author = {Dario Ghersi and
Roberto Sanchez},
title = {Recovering Bound Forms of Protein Structures Using the Elastic Network
Model and Molecular Interaction Fields},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {50--57},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2975172},
doi = {10.1145/2975167.2975172},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/GhersiS16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GhiasvandS16,
author = {Omid Ghiasvand and
Mary Shimoyama},
title = {Introducing a Text Annotation Tool (OntoMate), Assisting Curation
at Rat Genome Database},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {465},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2985631},
doi = {10.1145/2975167.2985631},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/GhiasvandS16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GhoshK16,
author = {Priyanka Ghosh and
Ananth Kalyanaraman},
title = {A Fast Sketch-based Assembler for Genomes},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {241--250},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2975192},
doi = {10.1145/2975167.2975192},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/GhoshK16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GoparajuS16,
author = {Aditya Goparaju and
Saeed Salem},
title = {A Multithreaded Algorithm for Mining Maximal Cohesive Dense Modules
from Interaction Networks with Gene Profiles},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {671--678},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2985693},
doi = {10.1145/2975167.2985693},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/GoparajuS16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Hassani-SaadiSZ16,
author = {Hamed Hassani{-}Saadi and
Reza Sameni and
Amin Zollanvari},
title = {Interpretive Time-Frequency Analysis of Genomic Sequences},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {532},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2985673},
doi = {10.1145/2975167.2985673},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/Hassani-SaadiSZ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HaugF16,
author = {Peter J. Haug and
Jeffrey P. Ferraro},
title = {Using a Semi-Automated Modeling Environment to Construct a Bayesian,
Sepsis Diagnostic System},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {571--578},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2985841},
doi = {10.1145/2975167.2985841},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/HaugF16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HerrmannWPKJC16,
author = {Julien Herrmann and
Zachary L. Witter and
Nakul Patel and
Jonathan Kho and
Daniel A. Janies and
{\"{U}}mit V. {\c{C}}ataly{\"{u}}rek},
title = {Visual analytics on the spread of pathogens},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {519--520},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2985666},
doi = {10.1145/2975167.2985666},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/HerrmannWPKJC16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HiranumaLL16,
author = {Naozumi Hiranuma and
Scott M. Lundberg and
Su{-}In Lee},
title = {CloudControl: Leveraging many public ChIP-seq control experiments
to better remove background noise},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {191--199},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2975187},
doi = {10.1145/2975167.2975187},
timestamp = {Fri, 26 Nov 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/HiranumaLL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HonPSTC16,
author = {Chun Pan Hon and
Mayana Pereira and
Shanu Sushmita and
Ankur Teredesai and
Martine De Cock},
title = {Risk Stratification for Hospital Readmission of Heart Failure Patients:
{A} Machine Learning Approach},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {491--492},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2985648},
doi = {10.1145/2975167.2985648},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/HonPSTC16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HuangSZ16,
author = {Shou{-}Hsuan Stephen Huang and
Ming{-}Chih Shih and
Youli Zu},
title = {A Multi-Objective Flow Cytometry Profiling for B-Cell Lymphoma Diagnosis},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {23--31},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2975169},
doi = {10.1145/2975167.2975169},
timestamp = {Sun, 25 Jul 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/HuangSZ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HuangWZLZZ16,
author = {Edward W. Huang and
Sheng Wang and
Runshun Zhang and
Baoyan Liu and
Xuezhong Zhou and
ChengXiang Zhai},
title = {PaReCat: Patient Record Subcategorization for Precision Traditional
Chinese Medicine},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {443--452},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2975213},
doi = {10.1145/2975167.2975213},
timestamp = {Wed, 13 Jul 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/HuangWZLZZ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/JeongY16,
author = {Hyundoo Jeong and
Byung{-}Jun Yoon},
title = {{SEQUOIA:} Significance enhanced network querying through context-sensitive
random walk and minimization of network conductance},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {535--536},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2985676},
doi = {10.1145/2975167.2985676},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/JeongY16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/JhaJ16,
author = {Kishlay Jha and
Wei Jin},
title = {Mining Novel Knowledge from Biomedical Literature using Statistical
Measures and Domain Knowledge},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {317--326},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2975200},
doi = {10.1145/2975167.2975200},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/JhaJ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/JiangMDG16,
author = {Hanyu Jiang and
Morisa Manzella and
Luka Djapic and
Narayan Ganesan},
title = {Computational Framework for in-Silico Study of Virtual Cell Biology
via Process Simulation and Multiscale Modeling},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {384--393},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2975207},
doi = {10.1145/2975167.2975207},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/JiangMDG16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/JieLJZ16,
author = {Biao Jie and
Mingxia Liu and
Xi Jiang and
Daoqiang Zhang},
title = {Sub-network Based Kernels for Brain Network Classification},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {622--629},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2985687},
doi = {10.1145/2975167.2985687},
timestamp = {Wed, 28 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/JieLJZ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/JinWL16,
author = {Haijing Jin and
Ying{-}Wooi Wan and
Zhandong Liu},
title = {Comprehensive Evaluation of RNA-seq Quantification Methods for Linearity},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {539},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2985678},
doi = {10.1145/2975167.2985678},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/JinWL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KamruzzamanKK16,
author = {Methun Kamruzzaman and
Ananth Kalyanaraman and
Bala Krishnamoorthy},
title = {Characterizing the Role of Environment on Phenotypic Traits using
Topological Data Analysis},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {487--488},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2985646},
doi = {10.1145/2975167.2985646},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/KamruzzamanKK16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KavuluruRHWHC16,
author = {Ramakanth Kavuluru and
Mar{\'{\i}}a Ramos{-}Morales and
Tara Holaday and
Amanda G. Williams and
Laura Haye and
Julie Cerel},
title = {Classification of Helpful Comments on Online Suicide Watch Forums},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {32--40},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2975170},
doi = {10.1145/2975167.2975170},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/KavuluruRHWHC16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KimIHCD16,
author = {Eunji Kim and
Ivan Ivanov and
Jianping Hua and
Robert S. Chapkin and
Edward R. Dougherty},
title = {Model-based study of the Effectiveness of Reporting Lists of Small
Feature Sets using RNA-Seq Data},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {470--471},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2985636},
doi = {10.1145/2975167.2985636},
timestamp = {Fri, 01 Jul 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/KimIHCD16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KimMP16,
author = {Yoo{-}Ah Kim and
Sanna Madan and
Teresa M. Przytycka},
title = {WeSME: Uncovering Mutual Exclusivity of Cancer Mutations},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {466},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2985633},
doi = {10.1145/2975167.2985633},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/KimMP16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KordiB16,
author = {Misagh Kordi and
Mukul S. Bansal},
title = {Exact Algorithms for Duplication-Transfer-Loss Reconciliation with
Non-Binary Gene Trees},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {297--306},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2975198},
doi = {10.1145/2975167.2975198},
timestamp = {Sun, 04 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/KordiB16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KwonPC16,
author = {Taein Kwon and
Eunjeong Park and
Hyukjae Chang},
title = {Smart Refrigerator for Healthcare Using Food Image Classification},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {483--484},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2985644},
doi = {10.1145/2975167.2985644},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/KwonPC16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LeeBPY16,
author = {Byunghan Lee and
Junghwan Baek and
Seunghyun Park and
Sungroh Yoon},
title = {deepTarget: End-to-end Learning Framework for microRNA Target Prediction
using Deep Recurrent Neural Networks},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {434--442},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2975212},
doi = {10.1145/2975167.2975212},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/LeeBPY16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiuYLSL16,
author = {Xiaoxia Liu and
Zhihao Yang and
Hongfei Lin and
Michael Simmons and
Zhiyong Lu},
title = {DIGNiFI: Discovering causative genes for orphan diseases using protein-protein
interaction networks},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {527},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2985669},
doi = {10.1145/2975167.2985669},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/LiuYLSL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MangulK16,
author = {Serghei Mangul and
David Koslicki},
title = {Reference-free comparison of microbial communities via de Bruijn graphs},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {68--77},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2975174},
doi = {10.1145/2975167.2975174},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/MangulK16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MarkinE16,
author = {Alexey Markin and
Oliver Eulenstein},
title = {Manhattan Path-Difference Median Trees},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {404--413},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2975209},
doi = {10.1145/2975167.2975209},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/MarkinE16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MatlockBKP16,
author = {Kevin Matlock and
Noah Berlow and
Charles Keller and
Ranadip Pal},
title = {Combination therapy design for maximizing sensitivity and minimizing
toxicity},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {530--531},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2985672},
doi = {10.1145/2975167.2985672},
timestamp = {Fri, 27 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/MatlockBKP16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MaximovaCPS16,
author = {Tatiana Maximova and
Daniel Carr and
Erion Plaku and
Amarda Shehu},
title = {Sample-based Models of Protein Structural Transitions},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {128--137},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2975180},
doi = {10.1145/2975167.2975180},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/MaximovaCPS16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/McGovernJDBKV16,
author = {Jeffrey D. McGovern and
Eric Johnson and
Alex Dekhtyar and
Michael Black and
Chris Kitts and
Jennifer Vanderkelen},
title = {Library-Based Microbial Source Tracking via Strain Identification},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {364--373},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2975205},
doi = {10.1145/2975167.2975205},
timestamp = {Wed, 12 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/McGovernJDBKV16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MenzelRR16,
author = {Karl Menzel and
Suzy C. P. Renn and
Anna M. Ritz},
title = {Copy Number Variation and Adaptive Evolutionary Radiations across
the African Cichlid phylogeny},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {505--506},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2985656},
doi = {10.1145/2975167.2985656},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/MenzelRR16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MilanoTXHCG16,
author = {Marianna Milano and
Olga Tymofiyeva and
Duan Xu and
Christopher Paul Hess and
Mario Cannataro and
Pietro Hiram Guzzi},
title = {Using Network Alignment for Analysis of Connectomes: Experiences from
a Clinical Dataset},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {649--656},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2985690},
doi = {10.1145/2975167.2985690},
timestamp = {Thu, 28 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/MilanoTXHCG16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MilicchioTVP16,
author = {Franco Milicchio and
Giuseppe Tradigo and
Pierangelo Veltri and
Mattia Prosperi},
title = {High-performance data structures for de novo assembly of genomes:
cache oblivious generic programming},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {657--662},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2985691},
doi = {10.1145/2975167.2985691},
timestamp = {Wed, 06 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/MilicchioTVP16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MillerYTC16,
author = {Neil Miller and
Byunggil Yoo and
Greyson Twist and
Shane Corder},
title = {The {CMH} Warehouse: {A} Catalog of Genetic Variation in Patients
of a Children's Hospital},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {480},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2985642},
doi = {10.1145/2975167.2985642},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/MillerYTC16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MishraBCZ16,
author = {Shital Kumar Mishra and
Sourav S. Bhowmick and
Huey{-}Eng Chua and
Jie Zheng},
title = {Predictive Modeling of Drug Effects on Signaling Pathways in Diverse
Cancer Cell Lines},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {200--209},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2975188},
doi = {10.1145/2975167.2975188},
timestamp = {Thu, 02 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/MishraBCZ16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MohammadiG16,
author = {Shahin Mohammadi and
Ananth Grama},
title = {De novo identification of cell type hierarchy with application to
compound marker detection},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {251--260},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2975193},
doi = {10.1145/2975167.2975193},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/MohammadiG16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MohammadiHTW16,
author = {Iman Mohammadi and
Seyedsasan Hashemikhabir and
Tammy Toscos and
Huanmei Wu},
title = {Health Care Needs of Underserved Populations in the City of Indianapolis},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {512--513},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2985660},
doi = {10.1145/2975167.2985660},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/MohammadiHTW16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MoonE16,
author = {Jucheol Moon and
Oliver Eulenstein},
title = {Robinson-Foulds Median Trees: {A} Clique-based Heuristic},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {374--383},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2975206},
doi = {10.1145/2975167.2975206},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/MoonE16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MurugesanBCDHW16,
author = {Sugeerth Murugesan and
Kristofer E. Bouchard and
Edward F. Chang and
Max Dougherty and
Bernd Hamann and
Gunther H. Weber},
title = {Hierarchical Spatio-temporal Visual Analysis of Cluster Evolution
in Electrocorticography Data},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {630--639},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2985688},
doi = {10.1145/2975167.2985688},
timestamp = {Sun, 02 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/MurugesanBCDHW16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/NguyenDD16,
author = {Tin Chi Nguyen and
Diana Diaz and
Sorin Draghici},
title = {{TOMAS:} {A} novel TOpology-aware Meta-Analysis approach applied to
System biology},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {13--22},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2975168},
doi = {10.1145/2975167.2975168},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/NguyenDD16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/NihalaniA16,
author = {Rahul Nihalani and
Srinivas Aluru},
title = {Effective Utilization of Paired Reads to Improve Length and Accuracy
of Contigs in Genome Assembly},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {355--363},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2975204},
doi = {10.1145/2975167.2975204},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/NihalaniA16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/OhHLO16,
author = {Somyung Oh and
Jeonghyeon Ha and
Kyungwon Lee and
Sejong Oh},
title = {Integrated Visualization Tool for Differentially Expressed Genes and
Gene Ontology Analysis},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {476--477},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2985639},
doi = {10.1145/2975167.2985639},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/OhHLO16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/PanFJLA16,
author = {Tony Pan and
Patrick Flick and
Chirag Jain and
Yongchao Liu and
Srinivas Aluru},
title = {Kmerind: {A} Flexible Parallel Library for K-mer Indexing of Biological
Sequences on Distributed Memory Systems},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {422--433},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2975211},
doi = {10.1145/2975167.2975211},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/PanFJLA16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ParidaH16,
author = {Laxmi Parida and
Niina Haiminen},
title = {Scalable Algorithms at Genomic Resolution to fit {LD} Distributions},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {271--278},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2975195},
doi = {10.1145/2975167.2975195},
timestamp = {Fri, 27 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ParidaH16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/PereiraSHMSC16,
author = {Mayana Pereira and
Vikhyati Singh and
Chun Pan Hon and
T. Greg McKelvey and
Shanu Sushmita and
Martine De Cock},
title = {Predicting Future Frequent Users of Emergency Departments in California
State},
booktitle = {Proceedings of the 7th {ACM} International Conference on Bioinformatics,
Computational Biology, and Health Informatics, {BCB} 2016, Seattle,
WA, USA, October 2-5, 2016},
pages = {603--610},
publisher = {{ACM}},
year = {2016},
url = {https://doi.org/10.1145/2975167.2985845},
doi = {10.1145/2975167.2985845},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/PereiraSHMSC16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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