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ORCIDJessica C. Kissinger
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2020 – today
- 2022
[j26]Beatrice Amos, Cristina Aurrecoechea, Matthieu Barba
, Ana Barreto, Evelina Y. Basenko, Wojciech Bazant, Robert Belnap, Ann S. Blevins, Ulrike Böhme, John Brestelli, Brian P. Brunk, Mark J. Caddick, Danielle Callan, Lahcen I. Campbell, Mikkel B. Christensen, George K. Christophides, Kathryn Crouch, Kristina Davis, Jeremy D. DeBarry, Ryan Doherty, Yikun Duan, Michael Dunn, Dave Falke, Steve Fisher, Paul Flicek, Brett Fox, Bindu Gajria, Gloria I. Giraldo-Calderón, Omar S. Harb, Elizabeth Harper, Christiane Hertz-Fowler, Mark J. Hickman, Connor Howington, Sufen Hu, Jay C. Humphrey, John Iodice, Andrew R. Jones, John Judkins, Sarah A. Kelly, Jessica C. Kissinger, Dae Kun Kwon, Kristopher Lamoureux, Daniel Lawson, Wei Li, Kallie Lies, Disha Lodha, Jamie Long, Robert M. MacCallum, Gareth Maslen, Mary Ann McDowell, Jaroslaw Nabrzyski, David S. Roos, Samuel S. C. Rund, Stephanie wever Schulman, Achchuthan Shanmugasundram, Vasily Sitnik, Drew Spruill, David Starns, Christian J. Stoeckert Jr., Sheena Shah Tomko, Haiming Wang, Susanne Warrenfeltz, Robert Wieck, Paul A. Wilkinson, Lin Xu, Jie Zheng:
VEuPathDB: the eukaryotic pathogen, vector and host bioinformatics resource center. Nucleic Acids Res. 50(D1): 898-911 (2022)- 2020
- [j25]Jeremy D. DeBarry, Jessica C. Kissinger, Mustafa V. Nural, Suman B. Pakala, Jay C. Humphrey, Esmeralda V. S. Meyer, Regina Joice Cordy, Monica Cabrera-Mora, Elizabeth D. Trippe, Jacob B. Aguilar, Ebru Karpuzoglu, Yi H. Yan, Jessica A. Brady, Allison N. Hankus, Nicolas Lackman, Alan R. Gingle, Vishal Nayak, Alberto Moreno, Chester J. Joyner, Juan B. Gutierrez, Mary R. Galinski:
Practical Recommendations for Supporting a Systems Biology Cyberinfrastructure. Data Sci. J. 19: 24 (2020)
2010 – 2019
- 2018
- [j24]Francislon S. Oliveira, John Brestelli, Shon Cade, Jie Zheng, John Iodice, Steve Fischer, Cristina Aurrecoechea, Jessica C. Kissinger, Brian P. Brunk, Christian J. Stoeckert Jr., Gabriel R. Fernandes, David S. Roos, Daniel P. Beiting:
MicrobiomeDB: a systems biology platform for integrating, mining and analyzing microbiome experiments. Nucleic Acids Res. 46(Database-Issue): D684-D691 (2018) - 2017
- [j23]Cristina Aurrecoechea, Ana Barreto, Evelina Y. Basenko, John Brestelli, Brian P. Brunk, Shon Cade, Kathryn Crouch, Ryan Doherty, Dave Falke, Steve Fischer, Bindu Gajria, Omar S. Harb, Mark Heiges, Christiane Hertz-Fowler, Sufen Hu, John Iodice, Jessica C. Kissinger, Cris Lawrence, Wei Li, Deborah F. Pinney, Jane A. Pulman, David S. Roos, Achchuthan Shanmugasundram, Fatima Silva-Franco, Sascha Steinbiss, Christian J. Stoeckert Jr., Drew Spruill, Haiming Wang, Susanne Warrenfeltz, Jie Zheng:
EuPathDB: the eukaryotic pathogen genomics database resource. Nucleic Acids Res. 45(Database-Issue): D581-D591 (2017) - 2016
- [j22]Olukemi O. Ifeonu, Raphael Simon, Sharon M. Tennant, Abhineet S. Sheoran, Maria C. Daly, Victor Felix, Jessica C. Kissinger, Giovanni Widmer, Myron M. Levine, Saul Tzipori, Joana C. Silva:
Cryptosporidium hominis gene catalog: a resource for the selection of novel Cryptosporidium vaccine candidates. Database J. Biol. Databases Curation 2016 (2016) - 2013
- [j21]Cristina Aurrecoechea, Ana Barreto, John Brestelli, Brian P. Brunk, Shon Cade, Ryan Doherty, Steve Fischer, Bindu Gajria, Xin Gao, Alan R. Gingle, Gregory R. Grant, Omar S. Harb, Mark Heiges, Sufen Hu, John Iodice, Jessica C. Kissinger, Eileen T. Kraemer, Wei Li, Deborah F. Pinney, Brian Pitts, David S. Roos, Ganesh Srinivasamoorthy, Christian J. Stoeckert Jr., Haiming Wang, Susanne Warrenfeltz:
EuPathDB: The Eukaryotic Pathogen database. Nucleic Acids Res. 41(Database-Issue): 684-691 (2013) - [j20]Adhemar Zerlotini, Eric R. G. R. Aguiar, Fudong Yu, Huayong Xu, Yixue Li, Neil D. Young, Robin B. Gasser, Anna V. Protasio, Matthew Berriman, David S. Roos, Jessica C. Kissinger, Guilherme C. Oliveira:
SchistoDB: an updated genome resource for the three key schistosomes of humans. Nucleic Acids Res. 41(Database-Issue): 728-731 (2013) - 2012
- [j19]Jason E. Stajich, Todd W. Harris, Brian P. Brunk, John Brestelli, Steve Fischer, Omar S. Harb, Jessica C. Kissinger, Wei Li, Vishal Nayak, Deborah F. Pinney, Christian J. Stoeckert Jr., David S. Roos:
FungiDB: an integrated functional genomics database for fungi. Nucleic Acids Res. 40(Database-Issue): 675-681 (2012) - [c8]Alok Dhamanaskar, Michael E. Cotterell, Jie Zheng, Jessica C. Kissinger, Christian J. Stoeckert Jr., John A. Miller:
Suggestions for Galaxy Workflow Design Using Semantically Annotated Services. FOIS 2012: 29-42 - 2011
- [j18]Steve Fischer, Cristina Aurrecoechea, Brian P. Brunk, Xin Gao, Omar S. Harb, Eileen T. Kraemer, Cary Pennington, Charles Treatman, Jessica C. Kissinger, David S. Roos, Christian J. Stoeckert Jr.:
The strategies WDK: a graphical search interface and web development kit for functional genomics databases. Database J. Biol. Databases Curation 2011 (2011) - [j17]Cristina Aurrecoechea, Ana Barreto, John Brestelli, Brian P. Brunk, Elisabet V. Caler, Steve Fischer, Bindu Gajria, Xin Gao, Alan R. Gingle, Gregory R. Grant, Omar S. Harb, Mark Heiges, John Iodice, Jessica C. Kissinger, Eileen T. Kraemer, Wei Li, Vishal Nayak, Cary Pennington, Deborah F. Pinney, Brian Pitts, David S. Roos, Ganesh Srinivasamoorthy, Christian J. Stoeckert Jr., Charles Treatman, Haiming Wang:
AmoebaDB and MicrosporidiaDB: functional genomic resources for Amoebozoa and Microsporidia species. Nucleic Acids Res. 39(Database-Issue): 612-619 (2011) - [c7]Chaitanya Guttula, Alok Dhamanaskar, Rui Wang, John A. Miller, Jessica C. Kissinger, Jie Zheng, Christian J. Stoeckert Jr.:
Enriching the Ontology for Biomedical Investigations (OBI) to Improve its Suitability for Web Service Annotations. ICBO 2011 - [c6]Rui Wang, Chaitanya Guttula, Maryam Panahiazar, Haseeb Yousaf, John A. Miller, Eileen T. Kraemer, Jessica C. Kissinger:
Web Service Composition Using Service Suggestions. SERVICES 2011: 482-489 - 2010
- [j16]Cristina Aurrecoechea, John Brestelli, Brian P. Brunk, Steve Fischer, Bindu Gajria, Xin Gao, Alan R. Gingle, Gregory R. Grant, Omar S. Harb, Mark Heiges, Frank Innamorato, John Iodice, Jessica C. Kissinger, Eileen T. Kraemer, Wei Li, John A. Miller, Vishal Nayak, Cary Pennington, Deborah F. Pinney, David S. Roos, Chris Ross, Ganesh Srinivasamoorthy, Christian J. Stoeckert Jr., Ryan Thibodeau, Charles Treatman, Haiming Wang:
EuPathDB: a portal to eukaryotic pathogen databases. Nucleic Acids Res. 38(Database-Issue): 415-419 (2010) - [j15]Martin Aslett, Cristina Aurrecoechea, Matthew Berriman, John Brestelli, Brian P. Brunk, Mark Carrington, Daniel P. Depledge, Steve Fischer, Bindu Gajria, Xin Gao, Malcolm J. Gardner, Alan R. Gingle, Gregory R. Grant, Omar S. Harb, Mark Heiges, Christiane Hertz-Fowler, Robin Houston, Frank Innamorato, John Iodice, Jessica C. Kissinger, Eileen T. Kraemer, Wei Li, Flora J. Logan, John A. Miller, Siddhartha Mitra, Peter J. Myler, Vishal Nayak, Cary Pennington, Isabelle Phan, Deborah F. Pinney, Gowthaman Ramasamy, Matthew B. Rogers, David S. Roos, Chris Ross, Dhileep Sivam, Deborah F. Smith, Ganesh Srinivasamoorthy, Christian J. Stoeckert Jr., Sandhya Subramanian, Ryan Thibodeau, Adrian Tivey, Charles Treatman, Giles Velarde, Haiming Wang:
TriTrypDB: a functional genomic resource for the Trypanosomatidae. Nucleic Acids Res. 38(Database-Issue): 457-462 (2010)
2000 – 2009
- 2009
- [j14]Zhiming Wang, Xin Gao, Congzhou He, John A. Miller, Jessica C. Kissinger, Mark Heiges, Eileen T. Kraemer:
An Evaluation of Multiple Approaches for Federating Biological Data. J. Inf. Technol. Res. 2(2): 42-64 (2009) - [j13]Cristina Aurrecoechea, John Brestelli, Brian P. Brunk, Jane M. Carlton, Jennifer Dommer, Steve Fischer, Bindu Gajria, Xin Gao, Alan R. Gingle, Gregory R. Grant, Omar S. Harb, Mark Heiges, Frank Innamorato, John Iodice, Jessica C. Kissinger, Eileen T. Kraemer, Wei Li, John A. Miller, Hilary G. Morrison, Vishal Nayak, Cary Pennington, Deborah F. Pinney, David S. Roos, Chris Ross, Christian J. Stoeckert Jr., Steven Sullivan, Charles Treatman, Haiming Wang:
GiardiaDB and TrichDB: integrated genomic resources for the eukaryotic protist pathogens Giardia lamblia and Trichomonas vaginalis. Nucleic Acids Res. 37(Database-Issue): 526-530 (2009) - [j12]Cristina Aurrecoechea, John Brestelli, Brian P. Brunk, Jennifer Dommer, Steve Fischer, Bindu Gajria, Xin Gao, Alan R. Gingle, Gregory R. Grant, Omar S. Harb, Mark Heiges, Frank Innamorato, John Iodice, Jessica C. Kissinger, Eileen T. Kraemer, Wei Li, John A. Miller, Vishal Nayak, Cary Pennington, Deborah F. Pinney, David S. Roos, Chris Ross, Christian J. Stoeckert Jr., Charles Treatman, Haiming Wang:
PlasmoDB: a functional genomic database for malaria parasites. Nucleic Acids Res. 37(Database-Issue): 539-543 (2009) - [j11]Adhemar Zerlotini, Mark Heiges, Haiming Wang, Romulo L. V. Moraes, Anderson J. Dominitini, Jerônimo C. Ruiz, Jessica C. Kissinger, Guilherme C. Oliveira:
SchistoDB: a Schistosoma mansoni genome resource. Nucleic Acids Res. 37(Database-Issue): 579-582 (2009) - [c5]Rui Wang, Douglas Brewer, Shefali Shastri, Srikalyan Swayampakula, John A. Miller, Eileen T. Kraemer, Jessica C. Kissinger:
Adapting the Galaxy Bioinformatics Tool to Support Semantic Web Service Composition. SERVICES I 2009: 283-290 - [c4]Kelly Storm, Eileen T. Kraemer, Cristina Aurrecoechea, Mark Heiges, Cary Pennington, Jessica C. Kissinger:
Web site evolution: Usability evaluation using Time Series Analysis of Selected Episode Graphs. WSE 2009: 27-36 - 2008
- [j10]Bindu Gajria, Amit Bahl, John Brestelli, Jennifer Dommer, Steve Fischer, Xin Gao, Mark Heiges, John Iodice, Jessica C. Kissinger, Aaron J. Mackey, Deborah F. Pinney, David S. Roos, Christian J. Stoeckert Jr., Haiming Wang, Brian P. Brunk:
ToxoDB: an integrated Toxoplasma gondii database resource. Nucleic Acids Res. 36(Database-Issue): 553-556 (2008) - [c3]Pablo N. Mendes, Bobby McKnight, Amit P. Sheth, Jessica C. Kissinger:
TcruziKB: Enabling Complex Queries for Genomic Data Exploration. ICSC 2008: 432-439 - [c2]Zhiming Wang, John A. Miller, Jessica C. Kissinger, Rui Wang, Douglas Brewer, Cristina Aurrecoechea:
WS-BioZard: A Wizard for Composing Bioinformatics Web Services. SERVICES I 2008: 437-444 - 2007
- [j9]Cristina Aurrecoechea, Mark Heiges, Haiming Wang, Zhiming Wang, Steve Fischer, Philippa M. Rhodes, John A. Miller, Eileen T. Kraemer, Christian J. Stoeckert Jr., David S. Roos, Jessica C. Kissinger:
ApiDB: integrated resources for the apicomplexan bioinformatics resource center. Nucleic Acids Res. 35(Database-Issue): 427-430 (2007) - [c1]Zhiming Wang, Xin Gao, Congzhou He, John A. Miller, Jessica C. Kissinger, Mark Heiges, Cristina Aurrecoechea, Eileen T. Kraemer, Cary Pennington:
A Comparison of Federated Databases with Web Services for the Integration of Bioinformatics Data. BIOCOMP 2007: 334-338 - 2006
- [j8]Haiming Wang, Yanqi Su, Aaron J. Mackey, Eileen T. Kraemer, Jessica C. Kissinger:
SynView: a GBrowse-compatible approach to visualizing comparative genome data. Bioinform. 22(18): 2308-2309 (2006) - [j7]Mark Heiges, Haiming Wang, Edward Robinson, Cristina Aurrecoechea, Xin Gao, Nivedita Kaluskar, Philippa M. Rhodes, Sammy Wang, Congzhou He, Yanqi Su, John A. Miller, Eileen T. Kraemer, Jessica C. Kissinger:
CryptoDB: a Cryptosporidium bioinformatics resource update. Nucleic Acids Res. 34(Database-Issue): 419-422 (2006) - [j6]Fernán Agüero, Wenlong Zheng, D. Brent Weatherly, Pablo N. Mendes, Jessica C. Kissinger:
TcruziDB: an integrated, post-genomics community resource for Trypanosoma cruzi. Nucleic Acids Res. 34(Database-Issue): 428-431 (2006) - 2004
- [j5]Daniela Puiu, Shinichiro Enomoto, Gregory A. Buck, Mitchell S. Abrahamsen, Jessica C. Kissinger:
CryptoDB: the Cryptosporidium genome resource. Nucleic Acids Res. 32(Database-Issue): 329-331 (2004) - [j4]Michael Luchtan, Chetna Warade, D. Brent Weatherly, Wim M. Degrave, Rick L. Tarleton, Jessica C. Kissinger:
TcruziDB: an integrated Trypanosoma cruzi genome resource. Nucleic Acids Res. 32(Database-Issue): 344-346 (2004) - 2003
- [j3]Amit Bahl, Brian P. Brunk, Jonathan Crabtree, Martin J. Fraunholz, Bindu Gajria, Gregory R. Grant, Hagai Ginsburg, Dinesh Gupta, Jessica C. Kissinger, Philip Labo, Li Li, Matthew D. Mailman, Arthur J. Milgram, David S. Pearson, David S. Roos, Jonathan Schug, Christian J. Stoeckert Jr., Patricia L. Whetzel:
PlasmoDB: the Plasmodium genome resource. A database integrating experimental and computational data. Nucleic Acids Res. 31(1): 212-215 (2003) - [j2]Jessica C. Kissinger, Bindu Gajria, Li Li, Ian T. Paulsen, David S. Roos:
ToxoDB: accessing the Toxoplasma gondii genome. Nucleic Acids Res. 31(1): 234-236 (2003) - 2002
- [j1]Amit Bahl, Brian P. Brunk, Ross L. Coppel, Jonathan Crabtree, Sharon J. Diskin, Martin J. Fraunholz, Gregory R. Grant, Dinesh Gupta, Robert L. Huestis, Jessica C. Kissinger, Philip Labo, Li Li, Shannon K. McWeeney, Arthur J. Milgram, David S. Roos, Jonathan Schug, Christian J. Stoeckert Jr.:
PlasmoDB: the Plasmodium genome resource. An integrated database providing tools for accessing, analyzing and mapping expression and sequence data (both finished and unfinished). Nucleic Acids Res. 30(1): 87-90 (2002)
Coauthor Index
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