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ORCIDAli Cakmak 0001
Person information
- affiliation: Istanbul Sehir University, Turkey
Other persons with the same name
- Ali Çakmak 0002
![[0000-0002-2783-9311]](https://dblp.uni-trier.de./img/orcid-mark.12x12.png "0000-0002-2783-9311")
(aka: Ali Cakmak 0002) — Bitlis Eren University, Bitlis, Turkey
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2020 – today
- 2023
[j19]Ali Cakmak, Huzeyfe Ayaz, Soykan Arikan, Ali Reza Ibrahimzada, Seyda Demirkol, Dilara Sönmez, Mehmet T. Hakan, Saime T. Sürmen, Cem Horozoglu, Mehmet B. Dogan, Özlem Küçükhüseyin, Canan Cacina, Bayram Kiran, Ümit Zeybek, Mehmet Baysan, Ilhan Yaylim:
Predicting the predisposition to colorectal cancer based on SNP profiles of immune phenotypes using supervised learning models. Medical Biol. Eng. Comput. 61(1): 243-258 (2023)- 2022
- [i2]Taha Tekdogan, Ali Cakmak:
Benchmarking Apache Spark and Hadoop MapReduce on Big Data Classification. CoRR abs/2209.10637 (2022) - 2021
- [j18]Mehmet Aytimur, Ali Cakmak:
Using positional sequence patterns to estimate the selectivity of SQL LIKE queries. Expert Syst. Appl. 165: 113762 (2021) - [j17]Ali Cakmak, M. Hasan Celik:
Personalized Metabolic Analysis of Diseases. IEEE ACM Trans. Comput. Biol. Bioinform. 18(3): 1014-1025 (2021) - [c16]Taha Tekdogan, Ali Cakmak:
Benchmarking Apache Spark and Hadoop MapReduce on Big Data Classification. ICCBDC 2021: 15-20 - 2020
- [j16]Esma Nafiye Polat, Ali Cakmak, Rabia Nuray-Turan:
Exploring the power of supervised learning methods for company name disambiguation in microblog posts. Turkish J. Electr. Eng. Comput. Sci. 28(5): 2400-2415 (2020) - [j15]Gihad N. Sohsah, Ali Reza Ibrahimzada, Huzeyfe Ayaz, Ali Cakmak:
Scalable classification of organisms into a taxonomy using hierarchical supervised learners. J. Bioinform. Comput. Biol. 18(5): 2050026:1-2050026:22 (2020) - [i1]Mehmet Aytimur, Ali Cakmak:
Using Positional Sequence Patterns to Estimate the Selectivity of SQL LIKE Queries. CoRR abs/2002.01164 (2020)
2010 – 2019
- 2019
- [j14]Emrullah Delibas, Ali Uzun, Mehmet Fatih Inan, Onur Guzey, Ali Cakmak:
Interactive exploratory soccer data analytics. INFOR Inf. Syst. Oper. Res. 57(2): 141-164 (2019) - 2018
- [j13]Ali Cakmak, Ali Uzun, Emrullah Delibas:
Computational Modeling of Pass Effectiveness in Soccer. Adv. Complex Syst. 21(3-4): 1850010:1-1850010:28 (2018) - [j12]Mehmet Aytimur, Ali Cakmak:
Estimating the selectivity of LIKE queries using pattern-based histograms. Turkish J. Electr. Eng. Comput. Sci. 26(6): 3320-3335 (2018) - 2014
- [j11]Abdullah Ercument Cicek, Xinjian Qi, Ali Cakmak, Stephen R. Johnson, Xu Han, Sami Alshalwi, Zehra Meral Özsoyoglu, Gultekin Özsoyoglu:
An online system for metabolic network analysis. Database J. Biol. Databases Curation 2014 (2014) - [c15]Feruz Davletov, Ali Selman Aydin, Ali Cakmak:
High Impact Academic Paper Prediction Using Temporal and Topological Features. CIKM 2014: 491-498 - 2013
- [c14]A. Ercüment Çiçek, Xinjian Qi, Ali Cakmak, Stephen R. Johnson, Xu Han, Sami Alshalwi, Gultekin Özsoyoglu:
PathCase-MAW: An Online Metabolic Network Analysis Workbench. BCB 2013: 219 - 2012
- [j10]Sarp A. Coskun, Xinjian Qi, Ali Cakmak, En Cheng, A. Ercüment Çiçek, Lei Yang, Rishiraj Jadeja, Ranjan K. Dash, Nicola Lai, Gultekin Özsoyoglu, Z. Meral Özsoyoglu:
PathCase-SB: integrating data sources and providing tools for systems biology research. BMC Syst. Biol. 6: 67 (2012) - [j9]Ali Cakmak, Xinjian Qi, A. Ercüment Çiçek, Ilya Bederman, Leigh Henderson, Mitchell L. Drumm, Gultekin Özsoyoglu:
A New metabolomics Analysis Technique: steady-State metabolic Network Dynamics Analysis. J. Bioinform. Comput. Biol. 10(1) (2012) - 2011
- [j8]Ali Cakmak, Xinjian Qi, Sarp A. Coskun, Mitali Das, En Cheng, A. Ercüment Çiçek, Nicola Lai, Gultekin Özsoyoglu, Z. Meral Özsoyoglu:
PathCase-SB architecture and database design. BMC Syst. Biol. 5: 188 (2011) - [c13]Ali Cakmak, Xinjian Qi, A. Ercüment Çiçek, Gultekin Özsoyoglu:
Computational interpretation of metabolomics measurements: steady-state metabolic network dynamics analysis. BCB 2011: 387-392 - 2010
- [j7]Ali Cakmak, Gultekin Özsoyoglu, Richard W. Hanson:
Querying metabolism under Different Physiological Constraints. J. Bioinform. Comput. Biol. 8(2): 247-293 (2010) - [c12]Ali Cakmak, Arun Dsouza, Richard W. Hanson, Z. Meral Özsoyoglu:
Analyzing metabolite measurements for automated prediction of underlying biological mechanisms. BCB 2010: 137-146 - [c11]En Cheng, Ali Cakmak, Z. Meral Özsoyoglu:
Efficient query evaluation for DAG-shaped hierarchies. BCB 2010: 454-456 - [c10]Brendan Elliott, Stephen Mayes, Ali Cakmak, Gultekin Özsoyoglu, Z. Meral Özsoyoglu:
Advanced querying interface for biochemical network databases. SAC 2010: 1526-1533
2000 – 2009
- 2009
- [j6]Brendan Elliott, Mustafa Kirac, Ali Cakmak, Gökhan Yavas, Stephen Mayes, En Cheng, Yuan Wang, Chirag Gupta, Gultekin Özsoyoglu, Z. Meral Özsoyoglu:
Corrigendum for Elliott, B. et al., 'PathCase pathways database system', Bioinformatics 2008, 24(21) 2526-2533. Bioinform. 25(20): 2773 (2009) - [j5]Nattakarn Ratprasartporn, Jonathan Po, Ali Cakmak, Sulieman Bani-Ahmad, Gultekin Özsoyoglu:
Context-based literature digital collection search. VLDB J. 18(1): 277-301 (2009) - [c9]Ali Cakmak, Mustafa Kirac, Gultekin Özsoyoglu:
PopulusLog: People information database. ISCIS 2009: 165-170 - [c8]Ali Cakmak, Arun Dsouza, Richard W. Hanson, Gultekin Özsoyoglu, Z. Meral Özsoyoglu:
A web-based data source for metabolomics. ISCIS 2009: 454-459 - 2008
- [j4]Brendan Elliott, Mustafa Kirac, Ali Cakmak, Gökhan Yavas, Stephen Mayes, En Cheng, Yuan Wang, Chirag Gupta, Gultekin Özsoyoglu, Z. Meral Özsoyoglu:
PathCase: pathways database system. Bioinform. 24(21): 2526-2533 (2008) - [j3]Ali Cakmak, Gultekin Özsoyoglu:
Discovering gene annotations in biomedical text databases. BMC Bioinform. 9 (2008) - [c7]Ali Cakmak, Gultekin Özsoyoglu:
Taxonomy-superimposed graph mining. EDBT 2008: 217-228 - 2007
- [j2]Ali Cakmak, Gultekin Özsoyoglu:
Mining biological networks for unknown pathways. Bioinform. 23(20): 2775-2783 (2007) - [c6]Nattakarn Ratprasartporn, Sulieman Bani-Ahmad, Ali Cakmak, Jonathan Po, Gultekin Özsoyoglu:
Evaluating Different Ranking Functions for Context-Based Literature Search. ICDE Workshops 2007: 261-268 - [c5]Ali Cakmak, Gultekin Özsoyoglu:
Annotating Genes Using Textual Patterns. Pacific Symposium on Biocomputing 2007: 221-232 - [c4]Ali Cakmak, Mustafa Kirac, Marc R. Reynolds, Z. Meral Özsoyoglu, Gultekin Özsoyoglu:
Gene Ontology-Based Annotation Analysis and Categorization of Metabolic Pathways. SSDBM 2007: 33 - 2006
- [c3]Mustafa Kirac, Ali Cakmak, Gultekin Özsoyoglu:
Task-Oriented Integrated Use of Biological Web Data Sources. SSDBM 2006: 81-90 - [c2]Nattakarn Ratprasartporn, Ali Cakmak, Gultekin Özsoyoglu:
On Data and Visualization Models for Signaling Pathways. SSDBM 2006: 133-142 - 2005
- [j1]Sulieman Bani-Ahmad, Ali Cakmak, Gultekin Özsoyoglu, Abdullah Al-Hamdani:
Evaluating Publication Similarity Measures. IEEE Data Eng. Bull. 28(4): 21-28 (2005) - [c1]Sulieman Bani-Ahmad, Ali Cakmak, Abdullah Al-Hamdani, Gultekin Özsoyoglu:
Evaluating Score and Publication Similarity Functions in Digital Libraries. ICADL 2005: 483-485
Coauthor Index
aka: Zehra Meral Özsoyoglu
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