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ORCIDAnthony J. Bonner
Person information
- affiliation: University of Toronto, Canada
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2020 – today
- 2020
[j17]Pierre Miasnikof, Alexander Y. Shestopaloff, Anthony J. Bonner, Yuri A. Lawryshyn, Panos M. Pardalos, Ernesto Estrada:
A density-based statistical analysis of graph clustering algorithm performance. J. Complex Networks 8(3) (2020)
2010 – 2019
- 2019
- [i2]Pierre Miasnikof, Alexander Y. Shestopaloff, Anthony J. Bonner, Yuri A. Lawryshyn, Panos M. Pardalos:
A Statistical Density-Based Analysis of Graph Clustering Algorithm Performance. CoRR abs/1906.02366 (2019) - 2018
- [c39]Pierre Miasnikof, Alexander Y. Shestopaloff, Anthony J. Bonner, Yuri A. Lawryshyn:
A Statistical Performance Analysis of Graph Clustering Algorithms. WAW 2018: 170-184 - 2014
- [c38]Reza Basseda, Michael Kifer, Anthony J. Bonner:
Planning with Transaction Logic. RR 2014: 29-44 - 2012
- [j16]Emad A. M. Andrews, Anthony J. Bonner:
Finding MAPs using strongly equivalent high order recurrent symmetric connectionist networks. Cogn. Syst. Res. 14(1): 50-59 (2012) - 2011
- [c37]Emad A. M. Andrews, Anthony J. Bonner:
Explaining Genetic Knock-Out Effects Using Cost-Based Abduction. IJCAI 2011: 1635-1640 - 2010
- [c36]Martin Renqiang Min, Laurens van der Maaten, Zineng Yuan, Anthony J. Bonner, Zhaolei Zhang:
Deep Supervised t-Distributed Embedding. ICML 2010: 791-798
2000 – 2009
- 2009
- [j15]Jingjing Li, Martin Renqiang Min
, Anthony J. Bonner, Zhaolei Zhang:
A Probabilistic Framework to Improve microRNA Target Prediction by Incorporating Proteomics Data. J. Bioinform. Comput. Biol. 7(6): 955-972 (2009) - [j14]Renqiang Min, Anthony J. Bonner, Jingjing Li, Zhaolei Zhang:
Learned Random-Walk Kernels and Empirical-Map Kernels for Protein Sequence Classification. J. Comput. Biol. 16(3): 457-474 (2009) - [c35]Martin Renqiang Min, David A. Stanley, Zineng Yuan, Anthony J. Bonner, Zhaolei Zhang:
A Deep Non-linear Feature Mapping for Large-Margin kNN Classification. ICDM 2009: 357-366 - [c34]Emad A. M. Andrews, Anthony J. Bonner:
Finding MAPs Using High Order Recurrent Networks. ICONIP (1) 2009: 100-109 - [c33]Martin Renqiang Min, Rui Kuang, Anthony J. Bonner, Zhaolei Zhang:
Learning Random-Walk Kernels for Protein Remote Homology Identification and Motif Discovery. SDM 2009: 133-144 - [i1]Martin Renqiang Min, David A. Stanley, Zineng Yuan, Anthony J. Bonner, Zhaolei Zhang:
Large-Margin kNN Classification Using a Deep Encoder Network. CoRR abs/0906.1814 (2009) - 2008
- [j13]Emad A. M. Andrews, Quaid Morris, Anthony J. Bonner:
Neural networks approaches for discovering the learnable correlation between gene function and gene expression in mouse. Neurocomputing 71(16-18): 3168-3175 (2008) - 2007
- [j12]Hui Lan, Rachel Carson, Nicholas J. Provart, Anthony J. Bonner:
Combining classifiers to predict gene function in Arabidopsis thaliana using large-scale gene expression measurements. BMC Bioinform. 8 (2007) - [c32]Martin Renqiang Min, Anthony J. Bonner, Zhaolei Zhang:
Modifying kernels using label information improves SVM classification performance. ICMLA 2007: 13-18 - 2006
- [c31]Emad A. M. Andrews Shenouda, Quaid Morris, Anthony J. Bonner:
Connectionist Approaches for Predicting Mouse Gene Function from Gene Expression. ICONIP (1) 2006: 280-289 - [c30]Anthony J. Bonner, Han Liu:
Towards the Prediction of Protein Abundance from Tandem Mass Spectrometry Data. SDM 2006: 599-603 - 2004
- [c29]Anthony J. Bonner, Han Liu:
Comparison of discrimination methods for peptide classification in tandem mass spectrometry. CIBCB 2004: 160-167 - [c28]Miles Trochesset, Anthony J. Bonner:
Clustering Labeled Data and Cross-Validation for Classification with Few Positives in Yeast. BIOKDD 2004: 48-55 - 2001
- [j11]Eric Harley, Anthony J. Bonner, Nathan Goodman:
Uniform integration of genome mapping data using intersection graphs. Bioinform. 17(6): 487-494 (2001) - [j10]Giansalvatore Mecca, Anthony J. Bonner:
Query Languages for Sequence Databases: Termination and Complexity. IEEE Trans. Knowl. Data Eng. 13(3): 519-525 (2001) - 2000
- [j9]Anthony J. Bonner, Giansalvatore Mecca:
Querying Sequence Databases with Transducers. Acta Informatica 36(7): 511-544 (2000)
1990 – 1999
- 1999
- [j8]Eric Harley, Anthony J. Bonner, Nathan Goodman:
Revealing hidden interval graph structure in STS-content data. Bioinform. 15(4): 278-285 (1999) - [c27]Anthony J. Bonner:
Workflow, Transactions, and Datalog. PODS 1999: 294-305 - 1998
- [j7]Anthony J. Bonner, Giansalvatore Mecca:
Sequences, Datalog, and Transducers. J. Comput. Syst. Sci. 57(3): 234-259 (1998) - [c26]Anthony J. Bonner, Michael Kifer:
The State of Change: A Survey. Transactions and Change in Logic Databases 1998: 1-36 - [c25]Anthony J. Bonner, Michael Kifer:
A Logic for Programming Database Transactions. Logics for Databases and Information Systems 1998: 117-166 - [c24]Anthony J. Bonner, Michael Kifer:
Results on Reasoning about Updates in Transaction Logic. Transactions and Change in Logic Databases 1998: 166-196 - 1997
- [j6]Anthony J. Bonner, Tomasz Imielinski:
Reusing and Modifying Rulebases by Predicate Substitution. J. Comput. Syst. Sci. 54(1): 136-166 (1997) - [j5]Anthony J. Bonner:
A Logical Semantics for Hypothetical Rulebases with Deletion. J. Log. Program. 32(2): 119-170 (1997) - [j4]Anthony J. Bonner:
Intuitionistic Deductive Databases and the Polynomial Time Hierarchy. J. Log. Program. 33(1): 1-47 (1997) - [c23]Anthony J. Bonner:
What Was Llull Up To? ARTS 1997: 1-14 - [c22]Anthony J. Bonner, Giansalvatore Mecca:
Querying String Databases with Transducers. DBPL 1997: 118-135 - [c21]Anthony J. Bonner:
Modular Composition of Transaction Programs with Deductive Databases. DBPL 1997: 373-395 - [c20]Anthony J. Bonner, Burkhard Freitag, Laura Giordano, Robert A. Kowalski:
Workshop DYNAMICS 97: (Trans)Actions and Change in Logic Programming and Deductive Databases. ILPS 1997: 415-416 - 1996
- [c19]Anthony J. Bonner, Adel Shrufi, Steve Rozen:
LabFlow-1: A Database Benchmark for High-Throughput Workflow Management. EDBT 1996: 463-478 - [c18]Anthony J. Bonner, Michael Kifer:
Concurrency and Communication in Transaction Logic. JICSLP 1996: 142-156 - [c17]Eric Harley, Anthony J. Bonner, Nathan Goodman:
Good Maps Are Straight. ISMB 1996: 88-97 - [c16]Anthony J. Bonner, Giansalvatore Mecca:
Sequence Datalog: Declarative String Manipulation in Databases. Logic in Databases 1996: 399-413 - 1995
- [c15]Giansalvatore Mecca, Anthony J. Bonner:
Finite Query Languages for Sequence Databases. DBPL 1995: 12 - [c14]Giansalvatore Mecca, Anthony J. Bonner:
Sequences, Datalog and Transducers. PODS 1995: 23-35 - 1994
- [j3]Anthony J. Bonner, Michael Kifer:
An Overview of Transaction Logic. Theor. Comput. Sci. 133(2): 205-265 (1994) - [c13]Anthony J. Bonner, Michael Kifer:
Applications of Transaction Logic to Knowledge Representation. ICTL 1994: 67-81 - [c12]Eric Harley, Anthony J. Bonner:
A Flexible Approach to Genome Map Assembly. ISMB 1994: 161-169 - 1993
- [c11]Anthony J. Bonner, Michael Kifer, Mariano P. Consens:
Database Programming in Transaction Logic. DBPL 1993: 309-337 - [c10]Anthony J. Bonner, Michael Kifer:
Transaction Logic Programming. ICLP 1993: 257-279 - 1992
- [c9]Anthony J. Bonner, Michael Kifer:
transaction Logic: An (Early) Exposé. Formal Methods in Databases and Software Engineering 1992: 1-24 - [c8]Anthony J. Bonner:
The Complexity of Reusing and Modifying Rulebases. PODS 1992: 316-330 - 1991
- [c7]Serge Abiteboul, Anthony J. Bonner:
Objects and Views. SIGMOD Conference 1991: 238-247 - 1990
- [j2]Anthony J. Bonner:
Hypothetical Datalog: Complexity and Expressibility. Theor. Comput. Sci. 76(1): 3-51 (1990) - [c6]Anthony J. Bonner, Tomasz Imielinski:
The Reuse and Modification of Rulebases by Predicate Substituation. EDBT 1990: 437-451 - [c5]Anthony J. Bonner, L. Thorne McCarty:
Adding Negation-as-Failure to Intuitionistic Logic Programming. NACLP 1990: 681-703
1980 – 1989
- 1989
- [c4]Anthony J. Bonner:
Hypothetical Datalog: Negation and Linear Recursion. PODS 1989: 286-300 - [c3]Anthony J. Bonner, L. Thorne McCarty, Kumar V. Vadaparty:
Expressing Database Queries with Intuitionistic Logic. NACLP 1989: 831-850 - 1988
- [c2]Anthony J. Bonner:
A Logic for Hypothetical Reasoning. AAAI 1988: 480-484 - [c1]Anthony J. Bonner:
Hypothetical Datalog: Complexity and Expressiblity. ICDT 1988: 144-160 - 1983
- [j1]Joseph N. Maksym, Anthony J. Bonner, C. Ann Dent, Gavin L. Hemphill:
Machine analysis of acoustical signals. Pattern Recognit. 16(6): 615-625 (1983)
Coauthor Index
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