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ORCIDVasco Ariston de Carvalho Azevedo
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Journal Articles
- 2024
[j16]Fábio Malcher Miranda
, Vasco Ariston de Carvalho Azevedo, Rommel Thiago Juca Ramos, Bernhard Y. Renard, Vitor Piro:
Hitac: a hierarchical taxonomic classifier for fungal ITS sequences compatible with QIIME2. BMC Bioinform. 25(1): 228 (2024)- 2023
- [j15]Amanda de Oliveira Matos, Thaís Cristina Vilela Rodrigues, Sandeep Tiwari, Pedro Henrique dos Santos Dantas, Geraldo Rodrigues Sartori, Vasco Ariston de Carvalho Azevedo, João Herminio Martins Da Silva, Siomar de Castro Soares, Marcelle Silva-Sales, Helioswilton Sales-Campos:
Immunoinformatics-guided design of a multi-valent vaccine against Rotavirus and Norovirus (ChRNV22). Comput. Biol. Medicine 159: 106941 (2023) - [j14]Diego Lucas Neres Rodrigues, Juan Carlos Ariute, Francielly Morais Rodrigues da Costa, Ana Maria Benko-Iseppon, Debmalya Barh, Vasco Ariston de Carvalho Azevedo, Flávia Figueira Aburjaile:
PanViTa: Pan Virulence and resisTance analysis. Frontiers Bioinform. 3 (2023) - 2022
- [j13]Thaís Cristina Vilela Rodrigues, Arun Kumar Jaiswal, Marcela Rezende Lemes, Marcos Vinícius da Silva, Helioswilton Sales-Campos, Luiz Carlos Júnior Alcântara, Sthephane Fraga de Oliveira Tosta, Rodrigo Bentes Kato, Khalid J. Alzahrani, Debmalya Barh, Vasco Ariston de Carvalho Azevedo, Sandeep Tiwari, Siomar de Castro Soares:
An immunoinformatics-based designed multi-epitope candidate vaccine (mpme-VAC/STV-1) against Mycoplasma pneumoniae. Comput. Biol. Medicine 142: 105194 (2022) - [j12]Luís Cláudio Lima De Jesus, Flávia Figueira Aburjaile, Thiago De Jesus Sousa, Andrei Giacchetto Felice, Siomar de Castro Soares, Luiz Carlos Júnior Alcântara, Vasco Ariston de Carvalho Azevedo:
Genomic Characterization of Lactobacillus delbrueckii Strains with Probiotics Properties. Frontiers Bioinform. 2 (2022) - 2020
- [j11]Debmalya Barh, Sandeep Tiwari, Marianna E. Weener, Vasco Ariston de Carvalho Azevedo, Aristóteles Góes-Neto, M. Michael Gromiha, Preetam Ghosh:
Multi-omics-based identification of SARS-CoV-2 infection biology and candidate drugs against COVID-19. Comput. Biol. Medicine 126: 104051 (2020) - 2017
- [j10]Eudes Barbosa, Richard Röttger, Anne-Christin Hauschild, Siomar de Castro Soares, Sebastian Böcker, Vasco Ariston de Carvalho Azevedo, Jan Baumbach:
LifeStyle-Specific-Islands (LiSSI): Integrated Bioinformatics Platform for Genomic Island Analysis. J. Integr. Bioinform. 14(2) (2017) - 2016
- [j9]Diego C. B. Mariano, Felipe L. Pereira, Edgar L. Aguiar, Letícia de Castro Oliveira, Leandro Benevides, Luis Guimarães, Edson Luiz Folador, Thiago J. Sousa, Preetam Ghosh, Debmalya Barh, Henrique C. P. Figueiredo, Artur Silva, Rommel Ramos, Vasco Ariston de Carvalho Azevedo:
SIMBA: a web tool for managing bacterial genome assembly generated by Ion PGM sequencing technology. BMC Bioinform. 17(S-18): 65-72 (2016) - [j8]Edson Luiz Folador, Paulo Vinícius Sanches Daltro de Carvalho, Wanderson Marques Silva, Rafaela Salgado Ferreira, Artur Silva, M. Michael Gromiha, Preetam Ghosh, Debmalya Barh, Vasco Ariston de Carvalho Azevedo, Richard Röttger:
In silico identification of essential proteins in Corynebacterium pseudotuberculosis based on protein-protein interaction networks. BMC Syst. Biol. 10: 103:1-103:9 (2016) - [j7]Diogo Almeida, Vasco Ariston de Carvalho Azevedo, Artur Silva, Jan Baumbach:
PetriScape - A plugin for discrete Petri net simulations in Cytoscape. J. Integr. Bioinform. 13(1) (2016) - [j6]Siomar de Castro Soares, Letícia de Castro Oliveira, Arun Kumar Jaiswal, Vasco Ariston de Carvalho Azevedo:
Genomic Islands: an overview of current software and future improvements. J. Integr. Bioinform. 13(1) (2016) - 2014
- [j5]Nicolas Alcaraz, Josch Pauling, Richa Batra, Eudes Barbosa, Alexander Junge, Anne Christensen, Vasco Ariston de Carvalho Azevedo, Henrik J. Ditzel, Jan Baumbach:
KeyPathwayMiner 4.0: condition-specific pathway analysis by combining multiple omics studies and networks with Cytoscape. BMC Syst. Biol. 8: 99 (2014) - 2013
- [j4]Richard Röttger, Prabhav Kalaghatgi, Peng Sun, Siomar de Castro Soares, Vasco Ariston de Carvalho Azevedo, Tobias Wittkop, Jan Baumbach:
Density parameter estimation for finding clusters of homologous proteins - tracing actinobacterial pathogenicity lifestyles. Bioinform. 29(2): 215-222 (2013) - 2012
- [j3]Luis Guimarães, Natália F. Silva, Anderson Miyoshi, Maria P. C. Schneider, Artur Silva, Vasco Ariston de Carvalho Azevedo, Davi S. B. Brasil, Jerônimo Lameira, Cláudio Nahum Alves:
Structure modeling of a metalloendopeptidase from Corynebacterium pseudotuberculosis. Comput. Biol. Medicine 42(5): 538-541 (2012) - [j2]Josch Pauling, Richard Röttger, Andreas Tauch, Vasco Ariston de Carvalho Azevedo, Jan Baumbach:
CoryneRegNet 6.0 - Updated database content, new analysis methods and novel features focusing on community demands. Nucleic Acids Res. 40(Database-Issue): 610-614 (2012) - [j1]Francisco Pereira Lobo, Maíra R. Rodrigues, Gisele O. L. Rodrigues, Heron O. Hilário, Raoni A. Souza, Andreas Tauch, Anderson Miyoshi, Glaura C. Franco, Vasco Ariston de Carvalho Azevedo, Glória R. Franco:
KOMODO: a web tool for detecting and visualizing biased distribution of groups of homologous genes in monophyletic taxa. Nucleic Acids Res. 40(Web-Server-Issue): 491-497 (2012)
Conference and Workshop Papers
- 2019
- [c4]Edian F. Franco, Dener Maués, Ronnie Alves, Luis Guimarães, Vasco Ariston de Carvalho Azevedo, Artur Silva, Preetam Ghosh, Jefferson Morais, Rommel Thiago Juca Ramos:
A Clustering Approach to Identify Candidates to Housekeeping Genes Based on RNA-seq Data. BSB 2019: 83-95 - 2015
- [c3]Joseph Nalluri, Pratip Rana, Vasco Ariston de Carvalho Azevedo, Debmalya Barh, Preetam Ghosh:
Determining influential miRNA targets in diseases using influence diffusion model. BCB 2015: 519-520 - 2014
- [c2]Eudes Barbosa, Richard Röttger, Anne-Christin Hauschild, Vasco Ariston de Carvalho Azevedo, Jan Baumbach:
On the limits of computational functional genomics for bacterial lifestyle prediction. GCB 2014: 79-84 - [c1]Pablo C. Gomes de Sa, Siomar de Castro Soares, Adonney A. de Oliveira Veras, Anne C. Pinto, Luis Guimarães, Vasco Ariston de Carvalho Azevedo, Artur Silva, Rommel Ramos:
The impact of the quality filter for RNA-Seq data over differential expression profile. IWBBIO 2014: 1445-1449
Reference Works
- 2019
- [r1]Edson Luiz Folador, Sandeep Tiwari, Camila E. Da Paz Barbosa, Syed B. Jamal, Marco Da Costa Schulze, Debmalya Barh, Vasco Ariston de Carvalho Azevedo:
Protein-Protein Interactions: An Overview. Encyclopedia of Bioinformatics and Computational Biology (2) 2019: 821-833
Coauthor Index
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