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ORCIDAdam M. Phillippy
Person information
- award (2019): Presidential Early Career Award for Scientists and Engineers
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2020 – today
- 2023
[j15]Bryce Kille
, Erik Garrison, Todd J. Treangen, Adam M. Phillippy:
Minmers are a generalization of minimizers that enable unbiased local Jaccard estimation. Bioinform. 39(9) (2023)- 2022
- [j14]Mitchell R. Vollger, Peter Kerpedjiev, Adam M. Phillippy, Evan E. Eichler:
StainedGlass: interactive visualization of massive tandem repeat structures with identity heatmaps. Bioinform. 38(7): 2049-2051 (2022) - 2020
- [j13]Chirag Jain, Arang Rhie, Haowen Zhang, Claudia Chu, Brian Walenz, Sergey Koren, Adam M. Phillippy:
Weighted minimizer sampling improves long read mapping. Bioinform. 36(Supplement-1): i111-i118 (2020)
2010 – 2019
- 2019
- [j12]Alexander T. Dilthey, Alexander J. Mentzer, Raphael Carapito, Clare Cutland, Nezih Cereb, Shabir A Madhi, Arang Rhie, Sergey Koren, Seiamak Bahram, Gil McVean, Adam M. Phillippy:
HLA*LA - HLA typing from linearly projected graph alignments. Bioinform. 35(21): 4394-4396 (2019) - [j11]Jay Ghurye, Arang Rhie, Brian Walenz, Anthony D. Schmitt, Siddarth Selvaraj, Mihai Pop, Adam M. Phillippy, Sergey Koren:
Integrating Hi-C links with assembly graphs for chromosome-scale assembly. PLoS Comput. Biol. 15(8) (2019) - 2018
- [j10]Chirag Jain, Sergey Koren, Alexander T. Dilthey, Adam M. Phillippy, Srinivas Aluru:
A fast adaptive algorithm for computing whole-genome homology maps. Bioinform. 34(17): i748-i756 (2018) - [j9]Chirag Jain, Alexander T. Dilthey, Sergey Koren, Srinivas Aluru, Adam M. Phillippy:
A Fast Approximate Algorithm for Mapping Long Reads to Large Reference Databases. J. Comput. Biol. 25(7): 766-779 (2018) - [j8]Guillaume Marçais, Arthur L. Delcher, Adam M. Phillippy, Rachel Coston, Steven L. Salzberg, Aleksey V. Zimin:
MUMmer4: A fast and versatile genome alignment system. PLoS Comput. Biol. 14(1) (2018) - 2017
- [c2]Chirag Jain, Alexander T. Dilthey, Sergey Koren, Srinivas Aluru, Adam M. Phillippy:
A Fast Approximate Algorithm for Mapping Long Reads to Large Reference Databases. RECOMB 2017: 66-81 - 2014
- [j7]Sergey Koren, Todd J. Treangen, Christopher Michael Hill, Mihai Pop, Adam M. Phillippy:
Automated ensemble assembly and validation of microbial genomes. BMC Bioinform. 15: 126 (2014) - 2013
- [j6]Michael C. Schatz, Adam M. Phillippy, Daniel D. Sommer, Arthur L. Delcher, Daniela Puiu, Giuseppe Narzisi, Steven L. Salzberg, Mihai Pop:
Hawkeye and AMOS: visualizing and assessing the quality of genome assemblies. Briefings Bioinform. 14(2): 213-224 (2013) - 2011
- [j5]Brian D. Ondov, Nicholas H. Bergman, Adam M. Phillippy:
Interactive metagenomic visualization in a Web browser. BMC Bioinform. 12: 385 (2011)
2000 – 2009
- 2009
- [j4]Adam M. Phillippy, Xiangyu Deng, Wei Zhang, Steven L. Salzberg:
Efficient oligonucleotide probe selection for pan-genomic tiling arrays. BMC Bioinform. 10: 293 (2009) - [j3]Adam M. Phillippy, Kunmi Ayanbule, Nathan J. Edwards, Steven L. Salzberg:
Insignia: a DNA signature search web server for diagnostic assay development. Nucleic Acids Res. 37(Web-Server-Issue): 229-234 (2009) - 2007
- [j2]Adam M. Phillippy, Jacquline A. Mason, Kunmi Ayanbule, Daniel D. Sommer, Elisa Taviani, Anwar Huq, Rita R. Colwell, Ivor T. Knight, Steven L. Salzberg:
Comprehensive DNA Signature Discovery and Validation. PLoS Comput. Biol. 3(5) (2007) - [c1]Hanan Samet, Adam M. Phillippy, Jagan Sankaranarayanan:
Knowledge discovery using the sand spatial browser. DG.O 2007: 284-285 - 2004
- [j1]Mihai Pop, Adam M. Phillippy, Arthur L. Delcher, Steven Salzberg:
Comparative genome assembly. Briefings Bioinform. 5(3): 237-248 (2004)
Coauthor Index
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