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Journal Articles
- 2017
[j12]Shailesh Tripathi, Jason Lloyd-Price, Andre S. Ribeiro
, Olli Yli-Harja, Matthias Dehmer, Frank Emmert-Streib:
sgnesR: An R package for simulating gene expression data from an underlying real gene network structure considering delay parameters. BMC Bioinform. 18(1): 325 (2017)- 2016
- [j11]Samuel M. D. Oliveira, Antti Häkkinen, Jason Lloyd-Price, Huy Tran, Vinodh Kandavalli, Andre S. Ribeiro:
Temperature-Dependent Model of Multi-step Transcription Initiation in Escherichia coli Based on Live Single-Cell Measurements. PLoS Comput. Biol. 12(10) (2016) - 2012
- [j10]Jason Lloyd-Price, Abhishekh Gupta, Andre S. Ribeiro:
SGNS2: a compartmentalized stochastic chemical kinetics simulator for dynamic cell populations. Bioinform. 28(22): 3004-3005 (2012) - [j9]Andre S. Ribeiro, Antti Häkkinen, Jason Lloyd-Price:
Effects of gene length on the dynamics of gene expression. Comput. Biol. Chem. 41: 1-9 (2012) - [j8]Abhishekh Gupta, Jason Lloyd-Price, Andre S. Ribeiro:
In silico analysis of division times of Escherichia coli populations as a function of the partitioning scheme of non-functional proteins. Silico Biol. 12(1-2) (2012) - 2011
- [j7]Andre S. Ribeiro, Jason Lloyd-Price, Sharif Chowdhury, Olli Yli-Harja:
Diversity of temporal correlations between genes in models of noisy and noiseless gene networks. Biosyst. 104(2-3): 136-144 (2011) - [j6]Jarno Mäkelä, Jason Lloyd-Price, Olli Yli-Harja, Andre S. Ribeiro:
Stochastic sequence-level model of coupled transcription and translation in prokaryotes. BMC Bioinform. 12: 121 (2011) - [j5]Meenakshisundaram Kandhavelu, Henrik Mannerström, Abhishekh Gupta, Antti Häkkinen, Jason Lloyd-Price, Olli Yli-Harja, Andre S. Ribeiro:
In vivo kinetics of transcription initiation of the lar promoter in Escherichia coli. Evidence for a sequential mechanism with two rate-limiting steps. BMC Syst. Biol. 5: 149 (2011) - 2010
- [j4]Andre S. Ribeiro, Jason Lloyd-Price, Brenda A. Eales, Fred G. Biddle:
Dynamic Agent-Based Model of Hand-Preference Behavior Patterns in the Mouse. Adapt. Behav. 18(2): 116-131 (2010) - [j3]Sharif Chowdhury, Jason Lloyd-Price, Olli-Pekka Smolander, Wayne C. V. Baici, Timothy R. Hughes, Olli Yli-Harja, Gordon Chua, Andre S. Ribeiro:
Information propagation within the Genetic Network of Saccharomyces cerevisiae. BMC Syst. Biol. 4: 143 (2010) - 2007
- [j2]Andre S. Ribeiro, Jason Lloyd-Price:
SGN Sim, a Stochastic Genetic Networks Simulator. Bioinform. 23(6): 777-779 (2007) - [j1]Andre S. Ribeiro, Daniel A. Charlebois, Jason Lloyd-Price:
CellLine, a stochastic cell lineage simulator. Bioinform. 23(24): 3409-3411 (2007)
Conference and Workshop Papers
- 2014
- [c1]Abhishekh Gupta, Jason Lloyd-Price, Andre S. Ribeiro:
Modelling Polar Retention of Complexes in Escherichia coli. CMSB 2014: 239-243
Coauthor Index
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