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ORCIDMarek Ostaszewski
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2020 – today
- 2024
[j17]Carlos Vega
, Marek Ostaszewski, Valentin Grouès, Reinhard Schneider, Venkata P. Satagopam:
BioKC: a collaborative platform for curation and annotation of molecular interactions. Database J. Biol. Databases Curation 2024 (2024)- 2023
- [j16]Piotr Gawron, David Hoksza, Janet Piñero, María Peña-Chilet, Marina Esteban-Medina, Jose Luis Fernandez-Rueda, Vincenza Colonna, Ewa Smula, Laurent Heirendt, François Ancien, Valentin Grouès, Venkata P. Satagopam, Reinhard Schneider, Joaquín Dopazo, Laura I. Furlong, Marek Ostaszewski:
Visualization of automatically combined disease maps and pathway diagrams for rare diseases. Frontiers Bioinform. 3 (2023) - [j15]Ahmed Abdelmonem Hemedan, Reinhard Schneider, Marek Ostaszewski:
Applications of Boolean modeling to study the dynamics of a complex disease and therapeutics responses. Frontiers Bioinform. 3 (2023) - [j14]Alexander Mazein, Marcio Luis Acencio, Irina Balaur, Adrien Rougny, Danielle Welter, Anna Niarakis, Diana Ramirez Ardila, Ugur Dogrusoz, Piotr Gawron, Venkata P. Satagopam, Wei Gu, Andreas Kremer, Reinhard Schneider, Marek Ostaszewski:
A guide for developing comprehensive systems biology maps of disease mechanisms: planning, construction and maintenance. Frontiers Bioinform. 3 (2023) - 2021
- [j13]David Hoksza, Piotr Gawron, Marek Ostaszewski, Jan Hasenauer, Reinhard Schneider:
Closing the gap between formats for storing layout information in systems biology. Briefings Bioinform. 22(1): 608 (2021) - [j12]Anna Niarakis, Martin Kuiper, Marek Ostaszewski, Rahuman S. Malik-Sheriff, Cristina Casals-Casas, Denis Thieffry, Tom C. Freeman, Paul D. Thomas, Vasundra Touré, Vincent Noël, Gautier Stoll, Julio Saez-Rodriguez, Aurélien Naldi, Eugenia Oshurko, Ioannis Xenarios, Sylvain Soliman, Claudine Chaouiya, Tomás Helikar, Laurence Calzone:
Setting the basis of best practices and standards for curation and annotation of logical models in biology - highlights of the [BC]2 2019 CoLoMoTo/SysMod Workshop. Briefings Bioinform. 22(2): 1848-1859 (2021) - [j11]Alexander Mazein, Adrien Rougny, Jonathan R. Karr, Julio Saez-Rodriguez, Marek Ostaszewski, Reinhard Schneider:
Reusability and composability in process description maps: RAS-RAF-MEK-ERK signalling. Briefings Bioinform. 22(5) (2021) - [j10]Kinza Rian, Marina Esteban-Medina, Marta R. Hidalgo, Cankut Çubuk, Matias M. Falco, Carlos Loucera, Devrim Gunyel, Marek Ostaszewski, María Peña-Chilet, Joaquín Dopazo:
Mechanistic modeling of the SARS-CoV-2 disease map. BioData Min. 14(1): 5 (2021) - [j9]Sune S. Nielsen, Marek Ostaszewski, Fintan McGee, David Hoksza, Simone Zorzan:
Machine Learning to Support the Presentation of Complex Pathway Graphs. IEEE ACM Trans. Comput. Biol. Bioinform. 18(3): 1130-1141 (2021) - 2020
- [j8]David Hoksza, Piotr Gawron, Marek Ostaszewski, Jan Hasenauer, Reinhard Schneider:
Closing the gap between formats for storing layout information in systems biology. Briefings Bioinform. 21(4): 1249-1260 (2020) - [j7]Vidisha Singh, George D. Kalliolias, Marek Ostaszewski, Maëva Veyssiere, Eleftherios Pilalis, Piotr Gawron, Alexander Mazein, Eric Bonnet, Elisabeth Petit-Teixeira, Anna Niarakis:
RA-map: building a state-of-the-art interactive knowledge base for rheumatoid arthritis. Database J. Biol. Databases Curation 2020 (2020)
2010 – 2019
- 2019
- [j6]Marek Ostaszewski, Stephan Gebel, Inna Kuperstein, Alexander Mazein, Andrei Yu. Zinovyev, Ugur Dogrusoz, Jan Hasenauer, Ronan M. T. Fleming, Nicolas Le Novère, Piotr Gawron, Thomas S. Ligon, Anna Niarakis, David P. Nickerson, Daniel Weindl, Rudi Balling, Emmanuel Barillot, Charles Auffray, Reinhard Schneider:
Community-driven roadmap for integrated disease maps. Briefings Bioinform. 20(2): 659-670 (2019) - [j5]David Hoksza, Piotr Gawron, Marek Ostaszewski, Ewa Smula, Reinhard Schneider:
MINERVA API and plugins: opening molecular network analysis and visualization to the community. Bioinform. 35(21): 4496-4498 (2019) - 2018
- [j4]David Hoksza, Piotr Gawron, Marek Ostaszewski, Reinhard Schneider:
MolArt: a molecular structure annotation and visualization tool. Bioinform. 34(23): 4127-4128 (2018) - [j3]Marek Ostaszewski, Emmanuel Kieffer, Grégoire Danoy, Reinhard Schneider, Pascal Bouvry:
Clustering approaches for visual knowledge exploration in molecular interaction networks. BMC Bioinform. 19(1): 308:1-308:15 (2018) - [c9]María Eugenia Curi, Lucía Carozzi, Renzo Massobrio, Sergio Nesmachnow, Grégoire Danoy, Marek Ostaszewski, Pascal Bouvry:
Single and Multiobjective Evolutionary Algorithms for Clustering Biomedical Information with Unknown Number of Clusters. BIOMA 2018: 100-112 - 2016
- [j2]Venkata P. Satagopam, Wei Gu, Serge Eifes, Piotr Gawron, Marek Ostaszewski, Stephan Gebel, Adriano Barbosa-Silva, Rudi Balling, Reinhard Schneider:
Integration and Visualization of Translational Medicine Data for Better Understanding of Human Diseases. Big Data 4(2): 97-108 (2016) - 2014
- [c8]Christian Grévisse, Ian Muller, Juan Luis Jiménez Laredo, Marek Ostaszewski, Grégoire Danoy, Pascal Bouvry:
Visualization and classification of protein secondary structures using Self-Organizing Maps. MCDM 2014: 129-136
2000 – 2009
- 2009
- [c7]Marek Ostaszewski, Pascal Bouvry, Franciszek Seredynski:
Multiobjective classification with moGEP: an application in the network traffic domain. GECCO 2009: 635-642 - 2008
- [c6]Marek Ostaszewski, Pascal Bouvry, Franciszek Seredynski:
An approach to intrusion detection by means of idiotypic networks paradigm. IEEE Congress on Evolutionary Computation 2008: 2099-2108 - [c5]Marek Ostaszewski, Pascal Bouvry, Franciszek Seredynski:
Denial of service detection and analysis using idiotypic networks paradigm. GECCO 2008: 79-86 - [c4]Marek Ostaszewski, Pascal Bouvry, Franciszek Seredynski:
Adaptive and dynamic intrusion detection by means of idiotypic networks paradigm. IPDPS 2008: 1-8 - 2007
- [j1]Marek Ostaszewski, Franciszek Seredynski, Pascal Bouvry:
Coevolutionary-based Mechanisms for Network Anomaly Detection. J. Math. Model. Algorithms 6(3): 411-431 (2007) - 2006
- [c3]Marek Ostaszewski, Franciszek Seredynski, Pascal Bouvry:
Immune anomaly detection enhanced with evolutionary paradigms. GECCO 2006: 119-126 - [c2]Marek Ostaszewski, Franciszek Seredynski, Pascal Bouvry:
Network Traffic Analysis Using Immunological and Evolutionary Paradigms. Intelligent Information Systems 2006: 359-363 - [c1]Marek Ostaszewski, Franciszek Seredynski, Pascal Bouvry:
A nonself space approach to network anomaly detection. IPDPS 2006
Coauthor Index
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last updated on 2024-10-07 22:18 CEST by the dblp team
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