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Journal Articles
- 2023
[j7]Sebastian Deorowicz
, Agnieszka Danek, Heng Li:
AGC: compact representation of assembled genomes with fast queries and updates. Bioinform. 39(3) (2023)- 2021
- [j6]Sebastian Deorowicz, Agnieszka Danek, Marek Kokot:
VCFShark: how to squeeze a VCF file. Bioinform. 37(19): 3358-3360 (2021) - 2019
- [j5]Sebastian Deorowicz, Adam Gudys, Maciej Dlugosz, Marek Kokot, Agnieszka Danek:
Kmer-db: instant evolutionary distance estimation. Bioinform. 35(1): 133-136 (2019) - [j4]Sebastian Deorowicz, Agnieszka Danek:
GTShark: genotype compression in large projects. Bioinform. 35(22): 4791-4793 (2019) - 2018
- [j3]Agnieszka Danek, Sebastian Deorowicz:
GTC: how to maintain huge genotype collections in a compressed form. Bioinform. 34(11): 1834-1840 (2018) - 2013
- [j2]Sebastian Deorowicz, Agnieszka Danek, Szymon Grabowski:
Genome compression: a novel approach for large collections. Bioinform. 29(20): 2572-2578 (2013) - [j1]Sebastian Deorowicz, Agnieszka Danek:
Bit-Parallel Algorithms for the Merged Longest Common Subsequence Problem. Int. J. Found. Comput. Sci. 24(8): 1281-1298 (2013)
Conference and Workshop Papers
- 2013
- [c3]Agnieszka Danek, Sebastian Deorowicz:
Bit-Parallel Algorithm for the Block Variant of the Merged Longest Common Subsequence Problem. ICMMI 2013: 173-181 - 2012
- [c2]Agnieszka Danek, Rafal Pokrzywa, Izabela Makalowska, Andrzej Polanski:
Application of the Burrows-Wheeler Transform for Searching for Approximate Tandem Repeats. PRIB 2012: 255-266 - 2010
- [c1]Agnieszka Danek, Joana Urbano, Ana Paula Rocha, Eugénio C. Oliveira:
Engaging the Dynamics of Trust in Computational Trust and Reputation Systems. KES-AMSTA (1) 2010: 22-31
Informal and Other Publications
- 2015
- [i2]Sebastian Deorowicz, Agnieszka Danek, Marcin Niemiec:
GDC 2: Compression of large collections of genomes. CoRR abs/1503.01624 (2015) - 2014
- [i1]Agnieszka Danek, Sebastian Deorowicz, Szymon Grabowski:
Indexing large genome collections on a PC. CoRR abs/1403.7481 (2014)
Coauthor Index
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