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Journal Articles
- 2021
[j6]Guillaume Gautreau, Adelme Bazin, Mathieu Gachet, Rémi Planel, Laura Burlot, Mathieu Dubois, Amandine Perrin, Claudine Médigue, Alexandra Calteau, Stéphane Cruveiller, Catherine Matias, Christophe Ambroise, Eduardo P. C. Rocha, David Vallenet:
Correction: PPanGGOLiN: Depicting microbial diversity via a partitioned pangenome graph. PLoS Comput. Biol. 17(12) (2021)- 2020
- [j5]David Vallenet
, Alexandra Calteau, Mathieu Dubois, Paul Amours, Adelme Bazin, Mylène Beuvin, Laura Burlot, Xavier Bussell, Stéphanie Fouteau, Guillaume Gautreau, Aurélie Lajus, Jordan Langlois, Rémi Planel, David Roche, Johan Rollin, Zoé Rouy, Valentin Sabatet, Claudine Médigue:
MicroScope: an integrated platform for the annotation and exploration of microbial gene functions through genomic, pangenomic and metabolic comparative analysis. Nucleic Acids Res. 48(Database-Issue): D579-D589 (2020) - [j4]Guillaume Gautreau, Adelme Bazin, Mathieu Gachet, Rémi Planel, Laura Burlot, Mathieu Dubois, Amandine Perrin, Claudine Médigue, Alexandra Calteau, Stéphane Cruveiller, Catherine Matias, Christophe Ambroise, Eduardo P. C. Rocha, David Vallenet:
PPanGGOLiN: Depicting microbial diversity via a partitioned pangenome graph. PLoS Comput. Biol. 16(3) (2020) - 2019
- [j3]Claudine Médigue, Alexandra Calteau, Stéphane Cruveiller, Mathieu Gachet, Guillaume Gautreau, Adrien Josso, Aurélie Lajus, Jordan Langlois, Hugo Pereira, Rémi Planel, David Roche, Johan Rollin, Zoé Rouy, David Vallenet:
MicroScope - an integrated resource for community expertise of gene functions and comparative analysis of microbial genomic and metabolic data. Briefings Bioinform. 20(4): 1071-1084 (2019) - 2017
- [j2]David Vallenet, Alexandra Calteau, Stéphane Cruveiller, Mathieu Gachet, Aurélie Lajus, Adrien Josso, Jonathan Mercier, Alexandre Renaux, Johan Rollin, Zoé Rouy, David Roche, Claude Scarpelli, Claudine Médigue:
MicroScope in 2017: an expanding and evolving integrated resource for community expertise of microbial genomes. Nucleic Acids Res. 45(Database-Issue): D517-D528 (2017) - 2013
- [j1]David Vallenet, Eugeni Belda, Alexandra Calteau, Stéphane Cruveiller, Stefan Engelen, Aurélie Lajus, François Le Fèvre, Cyrille Longin, Damien Mornico, David Roche, Zoé Rouy, Gregory Salvignol, Claude Scarpelli, Adam Alexander Thil Smith, Marion Weiman, Claudine Médigue:
MicroScope - an integrated microbial resource for the curation and comparative analysis of genomic and metabolic data. Nucleic Acids Res. 41(Database-Issue): 636-647 (2013)
Conference and Workshop Papers
- 2024
- [c2]Jérôme Arnoux, Angela Bonifati, Alexandra Calteau, Stefania Dumbrava, Guillaume Gautreau:
Integrating Complex Pangenome Graphs. ICDEW 2024: 350-354 - 2004
- [c1]Alexandra Calteau, Vincent Daubin, Guy Perrière:
Super-tree Approach for Studying the Phylogeny of Prokaryotes: New Results on Completely Sequenced Genomes. International Conference on Computational Science 2004: 700-708
Coauthor Index
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