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2020 – today
- 2024
[j11]Shubhrangshu Ghosh
, Pralay Mitra:
MaTPIP: A deep-learning architecture with eXplainable AI for sequence-driven, feature mixed protein-protein interaction prediction. Comput. Methods Programs Biomed. 244: 107955 (2024)- 2021
- [j10]Barnali Das, Pralay Mitra:
High-Performance Whole-Cell Simulation Exploiting Modular Cell Biology Principles. J. Chem. Inf. Model. 61(3): 1481-1492 (2021) - [j9]Anupam Banerjee, Kuntal Pal, Pralay Mitra:
An Evolutionary Profile Guided Greedy Parallel Replica-Exchange Monte Carlo Search Algorithm for Rapid Convergence in Protein Design. IEEE ACM Trans. Comput. Biol. Bioinform. 18(2): 489-499 (2021) - 2020
- [j8]Anupam Banerjee, Pralay Mitra:
Estimating the Effect of Single-Point Mutations on Protein Thermodynamic Stability and Analyzing the Mutation Landscape of the p53 Protein. J. Chem. Inf. Model. 60(6): 3315-3323 (2020) - [j7]Anupam Banerjee, Amit Kumar, Kushal Kanti Ghosh, Pralay Mitra:
Estimating Change in Foldability Due to Multipoint Deletions in Protein Structures. J. Chem. Inf. Model. 60(12): 6679-6690 (2020)
2010 – 2019
- 2019
- [j6]Barnali Das, Abhijeet Rajendra Patil, Pralay Mitra:
A network-based zoning for parallel whole-cell simulation. Bioinform. 35(1): 88-94 (2019) - [c1]Atif Hassan, Rohini Banerjee, Pabitra Mitra, Pralay Mitra:
Cluster-Based Relative Outlier Under-Sampling Technique. ICDM 2019: 229-241 - 2013
- [j5]Pralay Mitra, David Shultis, Yang Zhang:
EvoDesign: de novo protein design based on structural and evolutionary profiles. Nucleic Acids Res. 41(Webserver-Issue): 273-280 (2013) - [j4]Pralay Mitra, David Shultis, Jeffrey R. Brender, Jeff Czajka, David Marsh, Felicia Gray, Tomasz Cierpicki, Yang Zhang:
An Evolution-Based Approach to De Novo Protein Design and Case Study on Mycobacterium tuberculosis. PLoS Comput. Biol. 9(10) (2013) - 2011
- [j3]Pralay Mitra, Debnath Pal:
Using correlated parameters for improved ranking of protein-protein docking decoys. J. Comput. Chem. 32(5): 787-796 (2011) - [j2]Pralay Mitra, Debnath Pal:
PRUNE and PROBE - two modular web services for protein-protein docking. Nucleic Acids Res. 39(Web-Server-Issue): 229-234 (2011)
2000 – 2009
- 2009
- [j1]Pralay Mitra, Riddhiman Dhar, Debnath Pal:
Interface of Apoptotic Protein Complexes Has Distinct Properties. Silico Biol. 9(5-6): 365-378 (2009)
Coauthor Index
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