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Journal Articles
- 2016
[j8]Julio M. Belmonte
, Maciej H. Swat, James A. Glazier:
Filopodial-Tension Model of Convergent-Extension of Tissues. PLoS Comput. Biol. 12(6) (2016)- 2015
- [j7]Endre T. Somogyi, Jean-Marie Bouteiller, James A. Glazier, Matthias König, J. Kyle Medley, Maciej H. Swat, Herbert M. Sauro:
libRoadRunner: a high performance SBML simulation and analysis library. Bioinform. 31(20): 3315-3321 (2015) - 2014
- [j6]James P. Sluka, Abbas Shirinifard, Maciej Swat, Alin Cosmanescu, Randy W. Heiland, James A. Glazier:
The cell behavior ontology: describing the intrinsic biological behaviors of real and model cells seen as active agents. Bioinform. 30(16): 2367-2374 (2014) - 2012
- [j5]Abbas Shirinifard, James A. Glazier, Maciej Swat, J. Scott Gens, Fereydoon Family, Yi Jiang, Hans E. Grossniklaus:
Adhesion Failures Determine the Pattern of Choroidal Neovascularization in the Eye: A Computer Simulation Study. PLoS Comput. Biol. 8(5) (2012) - 2010
- [j4]David E. Larson, Ruth I. Johnson, Maciej Swat, Julia B. Cordero, James A. Glazier, Ross L. Cagan:
Computer Simulation of Cellular Patterning Within the Drosophila Pupal Eye. PLoS Comput. Biol. 6(7) (2010) - 2007
- [j3]Trevor M. Cickovski, Kedar Aras, Maciej Swat, Roeland Merks, Tilmann Glimm, H. George E. Hentschel, Mark S. Alber, James A. Glazier, Stuart A. Newman, Jesús A. Izaguirre:
From Genes to Organisms Via the Cell: A Problem-Solving Environment for Multicellular Development. Comput. Sci. Eng. 9(4): 50-60 (2007) - 2005
- [j2]Matthias Truss, Maciej Swat, Szymon M. Kielbasa, Reinhold Schäfer, Hanspeter Herzel, Christian Hagemeier:
HuSiDa - the human siRNA database: an open-access database for published functional siRNA sequences and technical details of efficient transfer into recipient cells. Nucleic Acids Res. 33(Database-Issue): 108-111 (2005) - 2004
- [j1]Maciej Swat, Alexander E. Kel, Hanspeter Herzel:
Bifurcation analysis of the regulatory modules of the mammalian G1/S transition. Bioinform. 20(10): 1506-1511 (2004)
Conference and Workshop Papers
- 2012
- [c3]Randy W. Heiland, Abbas Shirinifard, Maciej Swat, Gilberto L. Thomas, James P. Sluka, Andrew Lumsdaine, Benjamin Zaitlen, James A. Glazier:
Visualizing cells and their connectivity graphs for CompuCell3D. BioVis 2012: 85-90 - 2010
- [c2]Randy W. Heiland, Maciej Swat, Benjamin Zaitlen, James A. Glazier, Andrew Lumsdaine:
Workflows for parameter studies of multi-cell modeling. SpringSim 2010: 94 - 2003
- [c1]Maciej Swat, Alexander E. Kel, Szymon M. Kielbasa, Hanspeter Herzel:
Modeling the G1/S transition in mammals -Bifurcation an alysis of elementary modules. German Conference on Bioinformatics 2003: 147-152
Informal and Other Publications
- 2015
- [i1]Endre T. Somogyi, Jean-Marie Bouteiller, James A. Glazier, Matthias König, J. Kyle Medley, Maciej H. Swat, Herbert M. Sauro:
libRoadRunner: A High Performance SBML Simulation and Analysis Library. CoRR abs/1503.01095 (2015)
Coauthor Index
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