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Aleksandar Poleksic
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2020 – today
- 2024
- [i1]Aleksandar Poleksic:
Fast Dual-Regularized Autoencoder for Sparse Biological Data. CoRR abs/2401.16664 (2024) - 2022
- [j13]Aleksandar Poleksic:
Overcoming Sparseness of Biomedical Networks to Identify Drug Repositioning Candidates. IEEE ACM Trans. Comput. Biol. Bioinform. 19(4): 2377-2384 (2022)
2010 – 2019
- 2018
- [j12]Aleksandar Poleksic, Lei Xie:
Predicting serious rare adverse reactions of novel chemicals. Bioinform. 34(16): 2835-2842 (2018) - 2017
- [c7]Aleksandar Poleksic, Carson Turner, Rishabh Dalal, Paul Gray, Lei Xie:
Mining FDA resources to compute population-specific frequencies of adverse drug reactions. BIBM 2017: 1809-1814 - 2016
- [j11]Hansaim Lim, Aleksandar Poleksic, Yuan Yao, Hanghang Tong, Di He, Luke Zhuang, Patrick Meng, Lei Xie:
Large-Scale Off-Target Identification Using Fast and Accurate Dual Regularized One-Class Collaborative Filtering and Its Application to Drug Repurposing. PLoS Comput. Biol. 12(10) (2016) - 2015
- [j10]Aleksandar Poleksic:
A polynomial time algorithm for computing the area under a GDT curve. Algorithms Mol. Biol. 10: 27 (2015) - [c6]Aleksandar Poleksic:
Towards a better measure of protein 3D model quality. EIT 2015: 357-360 - 2014
- [c5]Aleksandar Poleksic, Paul Gray:
Utilizing twilight zone sequence similarities to increase the accuracy of protein 3D structure comparison. BCB 2014: 297-303 - 2013
- [j9]Aleksandar Poleksic:
Improved Algorithms for Matching r-Separated Sets with Applications to Protein Structure Alignment. IEEE ACM Trans. Comput. Biol. Bioinform. 10(1): 226-229 (2013) - 2012
- [j8]Aleksandar Poleksic:
On Complexity of Protein Structure Alignment Problem under Distance Constraint. IEEE ACM Trans. Comput. Biol. Bioinform. 9(2): 511-516 (2012) - [c4]Mauricio Arriagada, Aleksandar Poleksic:
Protein Structure Alignment: Is There Room for Improvement? CISIS 2012: 597-602 - [c3]Harald Kattnig, Aleksandar Poleksic:
Visualizing Protein Structural Superpositions and Alignments with StructAlignViewer. IV 2012: 573-577 - 2011
- [j7]Aleksandar Poleksic:
Optimal Pairwise Alignment of Fixed protein Structures in Subquadratic Time. J. Bioinform. Comput. Biol. 9(3): 367-382 (2011) - [j6]Aleksandar Poleksic:
Optimizing a Widely Used Protein Structure Alignment Measure in Expected Polynomial Time. IEEE ACM Trans. Comput. Biol. Bioinform. 8(6): 1716-1720 (2011) - 2010
- [c2]Aleksandar Poleksic:
Protein Structure Alignment in Subquadratic Time. BIONETICS 2010: 363-374
2000 – 2009
- 2009
- [j5]Aleksandar Poleksic:
Algorithms for optimal protein structure alignment. Bioinform. 25(21): 2751-2756 (2009) - [j4]Aleksandar Poleksic:
Island method for estimating the statistical significance of profile-profile alignment scores. BMC Bioinform. 10 (2009) - 2008
- [j3]Aleksandar Poleksic, Mark A. Fienup:
Optimizing the size of the sequence profiles to increase the accuracy of protein sequence alignments generated by profile-profile algorithms. Bioinform. 24(9): 1145-1153 (2008) - [j2]Aleksandar Poleksic, Mark A. Fienup, Joseph F. Danzer, Derek A. Debe:
A Different Look at the Quality of Modeled Three-Dimensional protein Structures. J. Bioinform. Comput. Biol. 6(2): 335-345 (2008) - 2007
- [c1]Aleksandar Poleksic, Joseph F. Danzer:
Protein side-chain modeling using a combination of knowledge and energy based approaches. BIOCOMP 2007: 378-382 - 2005
- [j1]Aleksandar Poleksic, Joseph F. Danzer, Kevin Hambly, Derek A. Debe:
Convergent Island Statistics: a fast method for determining local alignment score significance. Bioinform. 21(12): 2827-2831 (2005)
Coauthor Index
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