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2020 – today
- 2023
[j15]Axel von Kamp, Steffen Klamt
:
Balancing biomass reaction stoichiometry and measured fluxes in flux balance analysis. Bioinform. 39(10) (2023)- 2022
- [j14]Sven Thiele, Axel von Kamp, Pavlos Stephanos Bekiaris, Philipp Schneider, Steffen Klamt:
CNApy: a CellNetAnalyzer GUI in Python for analyzing and designing metabolic networks. Bioinform. 38(5): 1467-1469 (2022) - [j13]Philipp Schneider, Pavlos Stephanos Bekiaris, Axel von Kamp, Steffen Klamt:
StrainDesign: a comprehensive Python package for computational design of metabolic networks. Bioinform. 38(21): 4981-4983 (2022) - 2020
- [j12]Steffen Klamt, Radhakrishnan Mahadevan, Axel von Kamp:
Speeding up the core algorithm for the dual calculation of minimal cut sets in large metabolic networks. BMC Bioinform. 21(1): 510 (2020) - [j11]Philipp Schneider, Axel von Kamp, Steffen Klamt:
An extended and generalized framework for the calculation of metabolic intervention strategies based on minimal cut sets. PLoS Comput. Biol. 16(7) (2020)
2010 – 2019
- 2018
- [j10]Oliver Hädicke, Axel von Kamp, Timur Aydogan, Steffen Klamt:
OptMDFpathway: Identification of metabolic pathways with maximal thermodynamic driving force and its application for analyzing the endogenous CO2 fixation potential of Escherichia coli. PLoS Comput. Biol. 14(9) (2018) - 2015
- [j9]Radhakrishnan Mahadevan, Axel von Kamp, Steffen Klamt:
Genome-scale strain designs based on regulatory minimal cut sets. Bioinform. 31(17): 2844-2851 (2015) - 2014
- [j8]Axel von Kamp, Steffen Klamt:
Enumeration of Smallest Intervention Strategies in Genome-Scale Metabolic Networks. PLoS Comput. Biol. 10(1) (2014) - [p1]Steffen Klamt, Oliver Hädicke, Axel von Kamp:
Stoichiometric and Constraint-Based Analysis of Biochemical Reaction Networks. Large-Scale Networks in Engineering and Life Sciences 2014: 263-316 - 2013
- [j7]Claudine Chaouiya, Duncan Bérenguier, Sarah M. Keating, Aurélien Naldi, Martijn P. van Iersel, Nicolas Rodriguez, Andreas Dräger, Finja Büchel, Thomas Cokelaer, Bryan M. Kowal, Benjamin Wicks, Emanuel J. V. Gonçalves, Julien Dorier, Michel Page, Pedro T. Monteiro, Axel von Kamp, Ioannis Xenarios, Hidde de Jong, Michael Hucka, Steffen Klamt, Denis Thieffry, Nicolas Le Novère, Julio Saez-Rodriguez, Tomás Helikar:
SBML qualitative models: a model representation format and infrastructure to foster interactions between qualitative modelling formalisms and tools. BMC Syst. Biol. 7: 135 (2013) - 2012
- [j6]Kathrin Ballerstein, Axel von Kamp, Steffen Klamt, Utz-Uwe Haus:
Minimal cut sets in a metabolic network are elementary modes in a dual network. Bioinform. 28(3): 381-387 (2012) - 2011
- [j5]Steffen Klamt, Axel von Kamp:
An application programming interface for CellNetAnalyzer. Biosyst. 105(2): 162-168 (2011) - 2010
- [j4]Regina Samaga, Axel von Kamp, Steffen Klamt:
Computing Combinatorial Intervention Strategies and Failure Modes in Signaling Networks. J. Comput. Biol. 17(1): 39-53 (2010)
2000 – 2009
- 2009
- [j3]Steffen Klamt, Axel von Kamp:
Computing paths and cycles in biological interaction graphs. BMC Bioinform. 10 (2009) - 2006
- [j2]Axel von Kamp, Stefan Schuster:
Metatool 5.0: fast and flexible elementary modes analysis. Bioinform. 22(15): 1930-1931 (2006) - 2005
- [j1]Roland Schwarz, Patrick Musch, Axel von Kamp, Bernd Engels, R. Heiner Schirmer, Stefan Schuster, Thomas Dandekar:
YANA - a software tool for analyzing flux modes, gene-expression and enzyme activities. BMC Bioinform. 6: 135 (2005)
Coauthor Index
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