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ORCIDChikara Furusawa
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Journal Articles
- 2023
[j16]Yuji Omachi, Nen Saito
, Chikara Furusawa:
Rare-event sampling analysis uncovers the fitness landscape of the genetic code. PLoS Comput. Biol. 19(4) (2023)- 2017
- [j15]Hirotaka Matsumoto, Hisanori Kiryu, Chikara Furusawa, Minoru S. H. Ko, Shigeru B. H. Ko, Norio Gouda, Tetsutaro Hayashi, Itoshi Nikaido:
SCODE: an efficient regulatory network inference algorithm from single-cell RNA-Seq during differentiation. Bioinform. 33(15): 2314-2321 (2017) - [j14]Tetsuhiro S. Hatakeyama, Chikara Furusawa:
Metabolic dynamics restricted by conserved carriers: Jamming and feedback. PLoS Comput. Biol. 13(11) (2017) - 2015
- [j13]Tadashi Miyamoto, Chikara Furusawa, Kunihiko Kaneko:
Pluripotency, Differentiation, and Reprogramming: A Gene Expression Dynamics Model with Epigenetic Feedback Regulation. PLoS Comput. Biol. 11(8) (2015) - 2014
- [j12]Satoshi Ohno, Hiroshi Shimizu, Chikara Furusawa:
FastPros: screening of reaction knockout strategies for metabolic engineering. Bioinform. 30(7): 981-987 (2014) - 2012
- [j11]Sunisa Chatsurachai, Chikara Furusawa, Hiroshi Shimizu:
An in silico platform for the design of heterologous pathways in nonnative metabolite production. BMC Bioinform. 13: 93 (2012) - 2009
- [j10]Chikara Furusawa, Naoaki Ono, Shingo Suzuki, Tomoharu Agata, Hiroshi Shimizu, Tetsuya Yomo:
Model-based analysis of non-specific binding for background correction of high-density oligonucleotide microarrays. Bioinform. 25(1): 36-41 (2009) - [j9]Tomoharu Hogiri, Chikara Furusawa, Yohei Shinfuku, Naoaki Ono, Hiroshi Shimizu:
Analysis of metabolic network based on conservation of molecular structure. Biosyst. 95(3): 175-178 (2009) - [j8]Kumiko Kihara, Kotaro Mori, Shingo Suzuki, Naoaki Ono, Chikara Furusawa, Tetsuya Yomo:
Global/temporal gene expression analysis of Escherichia coli in the early stages of symbiotic relationship development with the cellular slime mold Dictyostelium discoideum. Biosyst. 96(2): 141-164 (2009) - [j7]Jianhong Ou, Chikara Furusawa, Tetsuya Yomo, Hiroshi Shimizu:
Analysis of stochasticity in promoter activation by using a dual-fluorescence reporter system. Biosyst. 97(3): 160-164 (2009) - 2008
- [j6]Naoaki Ono, Shingo Suzuki, Chikara Furusawa, Tomoharu Agata, Akiko Kashiwagi, Hiroshi Shimizu, Tetsuya Yomo:
An improved physico-chemical model of hybridization on high-density oligonucleotide microarrays. Bioinform. 24(10): 1278-1285 (2008) - [j5]Chikara Furusawa, Kunihiko Kaneko:
A Generic Mechanism for Adaptive Growth Rate Regulation. PLoS Comput. Biol. 4(1) (2008) - [j4]Kunihiko Kaneko, Chikara Furusawa:
Consistency principle in biological dynamical systems. Theory Biosci. 127(2): 195-204 (2008) - 2007
- [j3]Tadashi Yamada, Chikara Furusawa, Keisuke Nagahisa, Akiko Kashiwagi, Tetsuya Yomo, Hiroshi Shimizu:
Analysis of fluctuation in protein abundance without promoter regulation based on Escherichia coli continuous culture. Biosyst. 90(3): 614-622 (2007) - 2000
- [j2]Chikara Furusawa, Kunihiko Kaneko:
Complex Organization in Multicellularity as a Necessity in EvolutionComplex Organization in Multicellularity as a Necessity in Evolution. Artif. Life 6(4): 265-281 (2000) - 1998
- [j1]Chikara Furusawa, Kunihiko Kaneko:
Emergence of Multicellular Organisms with Dynamic Differentiation and Spatial Pattern. Artif. Life 4(1): 79-93 (1998)
Conference and Workshop Papers
- 2010
- [c6]Chikara Furusawa, Kota Ijichi, Hiroshi Shimizu:
Fluctuation-Driven Adaptation and Symbiosis in Cellular Dynamics. BIONETICS 2010: 238-248 - 2008
- [c5]Hiroshi Shimizu, Yohei Shinfuku, Masahiro Sono, Chikara Furusawa, Takashi Hirasawa:
Metabolic flux balance analysis of an industrially useful microorganism Corynebacerium glutamicum by a genome-scale reconstructed model. BIONETICS 2008: 17 - [c4]Naoaki Ono, Shingo Suzuki, Chikara Furusawa, Hiroshi Shimizu, Tetsuya Yomo:
Quantitative expression analysis using oligonucleotide microarrays based on a physico-chemical model. BIONETICS 2008: 18 - [c3]Chikara Furusawa, Kunihiko Kaneko, Hiroshi Shimizu:
A noise-driven mechanism for adaptive growth rate regulation. BIONETICS 2008: 37 - 2006
- [c2]Chikara Furusawa, Kunihiko Kaneko:
Emergence of Two Power-Laws in Evolution of Biochemical Network; Embedding Abundance Distribution into Topology. BioADIT 2006: 80-92 - [c1]Tadashi Yamada, Makoto Sadamitsu, Keisuke Nagahisa, Akiko Kashiwagi, Chikara Furusawa, Tetsuya Yomo, Hiroshi Shimizu:
Analysis of Fluctuation in Gene Expression Based on Continuous Culture System. BioADIT 2006: 113-127
Coauthor Index
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