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Mohamad Habes
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Journal Articles
- 2024
- [j10]Nicolas Honnorat, Sudha Seshadri, Ron Killiany, John Blangero, David C. Glahn, Peter T. Fox, Mohamad Habes:
Riemannian frameworks for the harmonization of resting-state functional MRI scans. Medical Image Anal. 91: 103043 (2024) - 2023
- [j9]Di Wang, Nicolas Honnorat, Peter T. Fox, Kerstin Ritter, Simon B. Eickhoff, Sudha Seshadri, Mohamad Habes:
Deep neural network heatmaps capture Alzheimer's disease patterns reported in a large meta-analysis of neuroimaging studies. NeuroImage 269: 119929 (2023) - [j8]Hangfan Liu, Michel J. Grothe, Tanweer Rashid, Miguel A. Labrador-Espinosa, Jon B. Toledo, Mohamad Habes:
ADCoC: Adaptive Distribution Modeling Based Collaborative Clustering for Disentangling Disease Heterogeneity from Neuroimaging Data. IEEE Trans. Emerg. Top. Comput. Intell. 7(2): 308-318 (2023) - 2022
- [j7]Nicolas Honnorat, Mohamad Habes:
Covariance shrinkage can assess and improve functional connectomes. NeuroImage 256: 119229 (2022) - 2020
- [j6]Raymond Pomponio, Güray Erus, Mohamad Habes, Jimit Doshi, Dhivya Srinivasan, Elizabeth Mamourian, Vishnu Bashyam, Ilya M. Nasrallah, Theodore D. Satterthwaite, Yong Fan, Lenore J. Launer, Colin L. Masters, Paul Maruff, Chuanjun Zhuo, Henry Völzke, Sterling C. Johnson, Jurgen Fripp, Nikolaos Koutsouleris, Christos Davatzikos:
Harmonization of large MRI datasets for the analysis of brain imaging patterns throughout the lifespan. NeuroImage 208: 116450 (2020) - [j5]Dhivya Srinivasan, Güray Erus, Jimit Doshi, David A. Wolk, Haochang Shou, Mohamad Habes, Christos Davatzikos:
A comparison of Freesurfer and multi-atlas MUSE for brain anatomy segmentation: Findings about size and age bias, and inter-scanner stability in multi-site aging studies. NeuroImage 223: 117248 (2020) - [j4]Hangfan Liu, Hongming Li, Mohamad Habes, Yuemeng Li, Pamela Boimel, James Janopaul-Naylor, Ying Xiao, Edgar Ben-Josef, Yong Fan:
Robust Collaborative Clustering of Subjects and Radiomic Features for Cancer Prognosis. IEEE Trans. Biomed. Eng. 67(10): 2735-2744 (2020) - 2017
- [j3]Saima Rathore, Mohamad Habes, Muhammad Aksam Iftikhar, Amanda Shacklett, Christos Davatzikos:
A review on neuroimaging-based classification studies and associated feature extraction methods for Alzheimer's disease and its prodromal stages. NeuroImage 155: 530-548 (2017) - 2015
- [j2]Deborah Janowitz, Katharina Wittfeld, Jan Terock, Harald Jürgen Freyberger, Katrin Hegenscheid, Henry Völzke, Mohamad Habes, Norbert Hosten, Nele Friedrich, Matthias Nauck, Grazyna Domanska, Hans Jörgen Grabe:
Association between waist circumference and gray matter volume in 2344 individuals from two adult community-based samples. NeuroImage 122: 149-157 (2015) - 2013
- [j1]Jens Meyer, Daniel Fredrich, Jens Piegsa, Mohamad Habes, Neeltje van den Berg, Wolfgang Hoffmann:
A mobile and asynchronous electronic data capture system for epidemiologic studies. Comput. Methods Programs Biomed. 110(3): 369-379 (2013)
Conference and Workshop Papers
- 2023
- [c5]Anoop Benet Nirmala, Tanweer Rashid, Elyas Fadaee, Nicolas Honnorat, Karl Li, Sokratis Charisis, Di Wang, Aishwarya Vemula, Jinqi Li, Peter Fox, Timothy E. Richardson, Jamie M. Walker, Kevin Bieniek, Sudha Seshadri, Mohamad Habes:
Deep Attention Assisted Multi-resolution Networks for the Segmentation of White Matter Hyperintensities in Postmortem MRI Scans. MLCN@MICCAI 2023: 143-152 - 2022
- [c4]Hangfan Liu, Karl Li, Jon B. Toledo, Mohamad Habes:
Collaborative Clustering Based on Adaptive Laplace Modeling for Neuroimaging Data Analysis. ISCAS 2022: 1630-1634 - 2021
- [c3]Hangfan Liu, Tanweer Rashid, Jeffrey B. Ware, Paul Jensen, Thomas Austin, Ilya M. Nasrallah, Robert B. Fisher, Susan R. Heckbert, Mohamad Habes:
Adaptive Squeeze-and-Shrink Image Denoising for Improving Deep Detection of Cerebral Microbleeds. MICCAI (6) 2021: 265-275 - 2020
- [c2]Hangfan Liu, Tanweer Rashid, Mohamad Habes:
Cerebral Microbleed Detection Via Fourier Descriptor with Dual Domain Distribution Modeling. ISBI Workshops 2020: 1-4 - 2012
- [c1]Mohamad Habes, Elena Rota Kops, Hans-Gerd Lipinski, Hans Herzog:
Skull Extraction from MR Images Generated by Ultra Short TE Sequence. Bildverarbeitung für die Medizin 2012: 268-273
Editorship
- 2023
- [e5]Ahmed Abdulkadir, Deepti R. Bathula, Nicha C. Dvornek, Sindhuja Tirumalai Govindarajan, Mohamad Habes, Vinod Kumar, Esten H. Leonardsen, Thomas Wolfers, Yiming Xiao:
Machine Learning in Clinical Neuroimaging - 6th International Workshop, MLCN 2023, Held in Conjunction with MICCAI 2023, Vancouver, BC, Canada, October 8, 2023, Proceedings. Lecture Notes in Computer Science 14312, Springer 2023, ISBN 978-3-031-44857-7 [contents] - 2022
- [e4]Ahmed Abdulkadir, Deepti R. Bathula, Nicha C. Dvornek, Mohamad Habes, Seyed Mostafa Kia, Vinod Kumar, Thomas Wolfers:
Machine Learning in Clinical Neuroimaging - 5th International Workshop, MLCN 2022, Held in Conjunction with MICCAI 2022, Singapore, September 18, 2022, Proceedings. Lecture Notes in Computer Science 13596, Springer 2022, ISBN 978-3-031-17898-6 [contents] - 2021
- [e3]Ahmed Abdulkadir, Seyed Mostafa Kia, Mohamad Habes, Vinod Kumar, Jane Maryam Rondina, Chantal M. W. Tax, Thomas Wolfers:
Machine Learning in Clinical Neuroimaging - 4th International Workshop, MLCN 2021, Held in Conjunction with MICCAI 2021, Strasbourg, France, September 27, 2021, Proceedings. Lecture Notes in Computer Science 13001, Springer 2021, ISBN 978-3-030-87585-5 [contents] - 2020
- [e2]Seyed Mostafa Kia, Hassan Mohy-ud-Din, Ahmed Abdulkadir, Cher Bass, Mohamad Habes, Jane Maryam Rondina, Chantal M. W. Tax, Hongzhi Wang, Thomas Wolfers, Saima Rathore, Madhura Ingalhalikar:
Machine Learning in Clinical Neuroimaging and Radiogenomics in Neuro-oncology - Third International Workshop, MLCN 2020, and Second International Workshop, RNO-AI 2020, Held in Conjunction with MICCAI 2020, Lima, Peru, October 4-8, 2020, Proceedings. Lecture Notes in Computer Science 12449, Springer 2020, ISBN 978-3-030-66842-6 [contents] - 2019
- [e1]Luping Zhou, Duygu Sarikaya, Seyed Mostafa Kia, Stefanie Speidel, Anand Malpani, Daniel A. Hashimoto, Mohamad Habes, Tommy Löfstedt, Kerstin Ritter, Hongzhi Wang:
OR 2.0 Context-Aware Operating Theaters and Machine Learning in Clinical Neuroimaging - Second International Workshop, OR 2.0 2019, and Second International Workshop, MLCN 2019, Held in Conjunction with MICCAI 2019, Shenzhen, China, October 13 and 17, 2019, Proceedings. Lecture Notes in Computer Science 11796, Springer 2019, ISBN 978-3-030-32694-4 [contents]
Informal and Other Publications
- 2023
- [i11]Zhijian Yang, Junhao Wen, Ahmed Abdulkadir, Yuhan Cui, Güray Erus, Elizabeth Mamourian, Randa Melhem, Dhivya Srinivasan, Sindhuja T. Govindarajan, Jiong Chen, Mohamad Habes, Colin L. Masters, Paul Maruff, Jurgen Fripp, Luigi Ferrucci, Marilyn S. Albert, Sterling C. Johnson, John C. Morris, Pamela LaMontagne, Daniel S. Marcus, Tammie L. S. Benzinger, David A. Wolk, Li Shen, Jingxuan Bao, Susan M. Resnick, Haochang Shou, Ilya M. Nasrallah, Christos Davatzikos:
Gene-SGAN: a method for discovering disease subtypes with imaging and genetic signatures via multi-view weakly-supervised deep clustering. CoRR abs/2301.10772 (2023) - 2022
- [i10]Di Wang, Nicolas Honnorat, Peter T. Fox, Kerstin Ritter, Simon B. Eickhoff, Sudha Seshadri, Mohamad Habes:
Deep neural network heatmaps capture Alzheimer's disease patterns reported in a large meta-analysis of neuroimaging studies. CoRR abs/2207.11352 (2022) - [i9]Tanweer Rashid, Hangfan Liu, Jeffrey B. Ware, Karl Li, Jose Rafael Romero, Elyas Fadaee, Ilya M. Nasrallah, Saima Hilal, R. Nick Bryan, Timothy M. Hughes, Christos Davatzikos, Lenore J. Launer, Sudha Seshadri, Susan R. Heckbert, Mohamad Habes:
Deep Learning Based Detection of Enlarged Perivascular Spaces on Brain MRI. CoRR abs/2209.13727 (2022) - 2021
- [i8]Zhijian Yang, Ilya M. Nasrallah, Haochang Shou, Junhao Wen, Jimit Doshi, Mohamad Habes, Güray Erus, Ahmed Abdulkadir, Susan M. Resnick, David A. Wolk, Christos Davatzikos:
Disentangling brain heterogeneity via semi-supervised deep-learning and MRI: dimensional representations of Alzheimer's Disease. CoRR abs/2102.12582 (2021) - [i7]Gyujoon Hwang, Ahmed Abdulkadir, Güray Erus, Mohamad Habes, Raymond Pomponio, Haochang Shou, Jimit Doshi, Elizabeth Mamourian, Tanweer Rashid, Murat Bilgel, Yong Fan, Aristeidis Sotiras, Dhivya Srinivasan, John C. Morris, Daniel S. Marcus, Marilyn S. Albert, R. Nick Bryan, Susan M. Resnick, Ilya M. Nasrallah, Christos Davatzikos, David A. Wolk:
Disentangling Alzheimer's disease neurodegeneration from typical brain aging using machine learning. CoRR abs/2109.03723 (2021) - [i6]Junhao Wen, Cynthia H. Y. Fu, Duygu Tosun, Yogasudha Veturi, Zhijian Yang, Ahmed Abdulkadir, Elizabeth Mamourian, Dhivya Srinivasan, Jingxuan Bao, Güray Erus, Haochang Shou, Mohamad Habes, Jimit Doshi, Erdem Varol, Scott R. Mackin, Aristeidis Sotiras, Yong Fan, Andrew J. Saykin, Yvette I. Sheline, Li Shen, Marylyn D. Ritchie, David A. Wolk, Marilyn S. Albert, Susan M. Resnick, Christos Davatzikos:
Multidimensional representations in late-life depression: convergence in neuroimaging, cognition, clinical symptomatology and genetics. CoRR abs/2110.11347 (2021) - 2020
- [i5]Tanweer Rashid, Ahmed Abdulkadir, Ilya M. Nasrallah, Jeffrey B. Ware, Pascal Spincemaille, J. Rafael Romero, R. Nick Bryan, Susan R. Heckbert, Mohamad Habes:
DEEPMIR: A DEEP convolutional neural network for differential detection of cerebral Microbleeds and IRon deposits in MRI. CoRR abs/2010.00148 (2020) - [i4]Vishnu M. Bashyam, Jimit Doshi, Güray Erus, Dhivya Srinivasan, Ahmed Abdulkadir, Mohamad Habes, Yong Fan, Colin L. Masters, Paul Maruff, Chuanjun Zhuo, Henry Völzke, Sterling C. Johnson, Jurgen Fripp, Nikolaos Koutsouleris, Theodore D. Satterthwaite, Daniel H. Wolf, Raquel E. Gur, Ruben C. Gur, John C. Morris, Marilyn S. Albert, Hans Jörgen Grabe, Susan M. Resnick, R. Nick Bryan, David A. Wolk, Haochang Shou, Ilya M. Nasrallah, Christos Davatzikos:
Medical Image Harmonization Using Deep Learning Based Canonical Mapping: Toward Robust and Generalizable Learning in Imaging. CoRR abs/2010.05355 (2020) - 2019
- [i3]Hongming Li, Mohamad Habes, David A. Wolk, Yong Fan:
A deep learning model for early prediction of Alzheimer's disease dementia based on hippocampal MRI. CoRR abs/1904.07282 (2019) - [i2]Jimit Doshi, Güray Erus, Mohamad Habes, Christos Davatzikos:
DeepMRSeg: A convolutional deep neural network for anatomy and abnormality segmentation on MR images. CoRR abs/1907.02110 (2019) - 2017
- [i1]Hongming Li, Mohamad Habes, Yong Fan:
Deep Ordinal Ranking for Multi-Category Diagnosis of Alzheimer's Disease using Hippocampal MRI data. CoRR abs/1709.01599 (2017)
Coauthor Index
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