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ORCIDJohn A. Rose
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- affiliation: Ritsumeikan Asia Pacific University, Institute of Information Communication Technology
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Journal Articles
- 2022
[j10]Yoshiro Saito, John A. Rose:
Reputation-based Decentralized Autonomous Organization for the non-profit sector: Leveraging blockchain to enhance good governance. Frontiers Blockchain 5 (2022)- 2010
- [j9]Ken Komiya
, Masayuki Yamamura, John A. Rose:
Experimental validation and optimization of signal dependent operation in whiplash PCR. Nat. Comput. 9(1): 207-218 (2010) - 2008
- [j8]Zuwairie Ibrahim, John A. Rose, Akira Suyama, Marzuki Khalid:
Experimental implementation and analysis of a DNA computing readout method based on real-time PCR with TaqMan probes. Nat. Comput. 7(2): 277-286 (2008) - 2005
- [j7]John A. Rose:
The fidelity of the tag-antitag system: Characterization of the stringent temperature for robustness in the excess limit. Int. J. Knowl. Based Intell. Eng. Syst. 9(4): 285-292 (2005) - 2004
- [j6]Max H. Garzon, John A. Rose:
Editorial. Nat. Comput. 3(4): 357-359 (2004) - [j5]John A. Rose, Akira Suyama:
Physical modeling of biomolecular computers: Models, limitations, and experimental validation. Nat. Comput. 3(4): 411-426 (2004) - [j4]John A. Rose, Russell J. Deaton, Akira Suyama:
Statistical thermodynamic analysis and designof DNA-based computers. Nat. Comput. 3(4): 443-459 (2004) - 2003
- [j3]John A. Rose, Mitsunori Takano, Masami Hagiya, Akira Suyama:
A DNA Computing-based Genetic Program for In Vitro Protein Evolution via Constrained Pseudomodule Shuffling. Genet. Program. Evolvable Mach. 4(2): 139-152 (2003) - 2002
- [j2]Masami Hagiya, John A. Rose, Ken Komiya, Kensaku Sakamoto:
Complexity analysis of the SAT engine: DNA algorithms as probabilistic algorithms. Theor. Comput. Sci. 287(1): 59-71 (2002) - 1998
- [j1]Russell J. Deaton, Max H. Garzon, John A. Rose, Donald R. Franceschetti, Stanley Edward Stevens Jr.:
DNA Compunting: A Review. Fundam. Informaticae 35(1-4): 231-245 (1998)
Conference and Workshop Papers
- 2016
- [c18]John A. Rose, Ken Komiya:
Analysis and design of a single-molecule DNA nanodevice for thermal band-pass filters. NEMS 2016: 79-84 - 2008
- [c17]Ken Komiya, Masayuki Yamamura, John A. Rose:
Experimental Validation of Signal Dependent Operation in Whiplash PCR. DNA 2008: 1-10 - 2007
- [c16]Zuwairie Ibrahim, Muhammad Faiz Mohamed Saaid, Ali S. Paramita, Akira Suyama, John A. Rose:
An improved readout method of molecular computation based on real-time PCR implemented on DNA Engine Opticon 2 System. IEEE Congress on Evolutionary Computation 2007: 1829-1834 - 2006
- [c15]Zuwairie Ibrahim, John A. Rose, Yusei Tsuboi, Osamu Ono, Marzuki Khalid:
A New Readout Approach in DNA Computing Based on Real-Time PCR with TaqMan Probes. DNA 2006: 350-359 - [c14]John A. Rose, Ken Komiya, Satsuki Yaegashi, Masami Hagiya:
Displacement Whiplash PCR: Optimized Architecture and Experimental Validation. DNA 2006: 393-403 - [c13]Ken Komiya, Satsuki Yaegashi, Masami Hagiya, Akira Suyama, John A. Rose:
Experimental Validation of the Statistical Thermodynamic Model for Prediction of the Behavior of Autonomous Molecular Computers Based on DNA Hairpin Formation. DNA 2006: 428-438 - 2004
- [c12]John A. Rose:
Equilibrium Modelling of Oligonucleotide Hybridization, Error, and Efficiency for DNA-Based Computational Systems. KES 2004: 8-10 - [c11]John A. Rose:
The Fidelity of the Tag-Antitag System III. Robustness in the Excess Limit: The Stringent Temperature. KES 2004: 40-49 - 2003
- [c10]John A. Rose, Masami Hagiya, Akira Suyama:
The fidelity of the tag-antitag system II: reconciliation with the stringency picture. IEEE Congress on Evolutionary Computation 2003: 2740-2747 - 2002
- [c9]John A. Rose, Mitsunori Takano, Akira Suyama:
A PNA-mediated Whiplash PCR-based Program for In Vitro Protein Evolution. DNA 2002: 47-60 - [c8]Russell J. Deaton, Junghuei Chen, Hong Bi, John A. Rose:
A Software Tool for Generating Non-crosshybridizing Libraries of DNA Oligonucleotides. DNA 2002: 252-261 - 2001
- [c7]John A. Rose, Russell J. Deaton, Masami Hagiya, Akira Suyama:
PNA-mediated Whiplash PCR. DNA 2001: 104-116 - [c6]John A. Rose, Russell J. Deaton, Masami Hagiya, Akira Suyama:
The Fidelity of the Tag-Antitag System. DNA 2001: 138-149 - 2000
- [c5]John A. Rose, Russell J. Deaton:
The Fidelity of Annealing-Ligation: A Theoretical Analysis. DNA Computing 2000: 231-246 - 1999
- [c4]Max H. Garzon, Russell J. Deaton, John A. Rose:
Soft molecular computing. DNA Based Computers 1999: 91-100 - 1997
- [c3]Y. Gao, Max H. Garzon, R. C. Murphy, John A. Rose, Russell J. Deaton, Donald R. Franceschetti, Stanley Edward Stevens Jr.:
DNA implementation of nondeterminism. DNA Based Computers 1997: 137-148 - [c2]Russell J. Deaton, R. C. Murphy, John A. Rose, Max H. Garzon, Donald R. Franceschetti, S. E. Stevens:
A DNA based implementation of an evolutionary search for good encodings for DNA computation. ICEC 1997: 267-271 - [c1]Max H. Garzon, Y. Gao, John A. Rose, R. C. Murphy, Russell J. Deaton, Donald R. Franceschetti, Stanley Edward Stevens Jr.:
In Vitro Implementation of Finite-State Machines. Workshop on Implementing Automata 1997: 56-74
Coauthor Index
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