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ORCIDNoushin Ghaffari
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2020 – today
- 2024
[c10]Noushin Ghaffari, Lijie Zhou, Rabeya Nazara, Catherine M. Mageeney, Kelly P. Williams:
Unsupervised Machine Learning Techniques to Categorize Genomic Islands. EIT 2024: 504-507- 2023
- [c9]Noushin Ghaffari
, Swaathi Suguna Venkatesh, Rabeya Nazara, Oluwaseyi Oladejo, Rakshith Puligundla Venugopal, Stephen J. Gaughran, Bridgett M. Vonholdt:
Workflow for Understanding the Phenotypic Characteristics of Seals by Epigenetic Analysis. PEARC 2023: 442-444 - [c8]Noushin Ghaffari, Lijie Zhou, Catherine M. Mageeney, Kelly Porter Williams:
Exploring Unsupervised Machine Learning Techniques for Genomic Island Categorization. PEARC 2023: 445-447 - [c7]Fatema Shormin, Noushin Ghaffari, Catherine M. Mageeney, Kelly Porter Williams:
Comparative Computational Approach for Evaluating Transposon Detection in Genomic Data. PEARC 2023: 481-482
2010 – 2019
- 2018
- [j9]Noushin Ghaffari, Osama A. Arshad, Hyundoo Jeong, John Thiltges, Michael F. Criscitiello, Byung-Jun Yoon, Aniruddha Datta, Charles D. Johnson:
Examining De Novo Transcriptome Assemblies via a Quality Assessment Pipeline. IEEE ACM Trans. Comput. Biol. Bioinform. 15(2): 494-505 (2018) - 2017
- [j8]Chun-Chi Chen, Noushin Ghaffari, Xiaoning Qian, Byung-Jun Yoon:
Optimal hybrid sequencing and assembly: Feasibility conditions for accurate genome reconstruction and cost minimization strategy. Comput. Biol. Chem. 69: 153-163 (2017) - 2016
- [c6]Noushin Ghaffari, Jordi Abante, Raminder Singh, Philip D. Blood, Charles D. Johnson:
Computational Considerations in Transcriptome Assemblies and Their Evaluation, using High Quality Human RNA-Seq data. XSEDE 2016: 17:1-17:4 - 2014
- [c5]Noushin Ghaffari, Osama A. Arshad, Hyundoo Jeong, John Thiltges, Michael F. Criscitiello, Byung-Jun Yoon, Aniruddha Datta, Charles D. Johnson:
De novo transcriptome assemblies and annotation for pacifie whiteleg shrimp. GlobalSIP 2014: 1342-1343 - 2013
- [j7]Noushin Ghaffari, Mohammadmahdi R. Yousefi, Charles D. Johnson, Ivan Ivanov, Edward R. Dougherty:
Modeling the Next Generation Sequencing sample processing pipeline for the purposes of classification. BMC Bioinform. 14: 307 (2013) - 2011
- [j6]Noushin Ghaffari, Ivan Ivanov, Xiaoning Qian, Edward R. Dougherty:
A CoD-based stationary control policy for intervening in large gene regulatory networks. BMC Bioinform. 12(S-10): S10 (2011) - [j5]Ying Wang, Noushin Ghaffari, Charles D. Johnson, Ulisses M. Braga-Neto, Hui Wang, Rui Chen, Huaijun Zhou:
Evaluation of the coverage and depth of transcriptome by RNA-Seq in chickens. BMC Bioinform. 12(S-10): S5 (2011) - 2010
- [j4]Noushin Ghaffari, Ivan Ivanov, Xiaoning Qian, Edward R. Dougherty:
A CoD-based reduction algorithm for designing stationary control policies on Boolean networks. Bioinform. 26(12): 1556-1563 (2010) - [j3]Xiaoning Qian, Noushin Ghaffari, Ivan Ivanov, Edward R. Dougherty:
State reduction for network intervention in probabilistic Boolean networks. Bioinform. 26(24): 3098-3104 (2010) - [j2]Ivan Ivanov, Plamen Simeonov, Noushin Ghaffari, Xiaoning Qian, Edward R. Dougherty:
Selection policy-induced reduction mappings for Boolean networks. IEEE Trans. Signal Process. 58(9): 4871-4882 (2010)
2000 – 2009
- 2009
- [j1]Xiaoning Qian, Ivan Ivanov, Noushin Ghaffari, Edward R. Dougherty:
Intervention in gene regulatory networks via greedy control policies based on long-run behavior. BMC Syst. Biol. 3: 61 (2009) - [c4]Noushin Ghaffari, Ivan Ivanov, Edward R. Dougherty:
A CoD based reduction algorithm for Boolean and probabilistic Boolean networks. GENSiPS 2009: 1-2 - 2007
- [c3]Cole Harris, Noushin Ghaffari:
Biomarker Discovery Across Annotated and Unannotated Microarray Datasets Using Semi-Supervised Learning. BIOCOMP 2007: 195-200 - 2006
- [c2]Noushin Ghaffari, Hisham Al-Mubaid:
A New Gene Selection Technique Using Feature Selection Methodology. CATA 2006: 217-222 - [c1]Hisham Al-Mubaid, Noushin Ghaffari:
Identifying the most significant genes from gene expression profiles for sample classification. GrC 2006: 655-658
Coauthor Index
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