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ORCIDEkaterina Khrameeva
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Journal Articles
- 2023
[j5]Victoria A Kobets, Sergey V. Ulianov, Aleksandra A. Galitsyna
, Semen A. Doronin, Elena A. Mikhaleva, Mikhail S. Gelfand, Yuri Y. Shevelyov, Sergey V. Razin, Ekaterina E. Khrameeva:
HiConfidence: a novel approach uncovering the biological signal in Hi-C data affected by technical biases. Briefings Bioinform. 24(2) (2023)- 2020
- [j4]Michal Rozenwald, Aleksandra A. Galitsyna, Grigory V. Sapunov, Ekaterina E. Khrameeva, Mikhail S. Gelfand:
A machine learning framework for the prediction of chromatin folding in Drosophila using epigenetic features. PeerJ Comput. Sci. 6: e307 (2020) - 2018
- [j3]Evgeny E. Akkuratov, Mikhail S. Gelfand, Ekaterina Khrameeva:
Neanderthal and Denisovan ancestry in Papuans: A functional study. J. Bioinform. Comput. Biol. 16(2): 1840011:1-1840011:12 (2018) - 2016
- [j2]Ekaterina Khrameeva, Geoffrey Fudenberg, Mikhail S. Gelfand, Leonid A. Mirny:
History of chromosome rearrangements reflects the spatial organization of yeast chromosomes. J. Bioinform. Comput. Biol. 14(2): 1641002:1-1641002:12 (2016) - 2012
- [j1]Ekaterina Khrameeva, Mikhail S. Gelfand:
Biases in read coverage demonstrated by interlaboratory and interplatform comparison of 117 mRNA and genome sequencing experiments. BMC Bioinform. 13(S-6): S4 (2012)
Conference and Workshop Papers
- 2018
- [c6]Michal Rozenwald, Ekaterina Khrameeva, Grigory V. Sapunov, Mikhail S. Gelfand:
Prediction of 3D Chromatin Structure Using Recurrent Neural Networks. BIBM 2018: 2488 - [c5]Sergei Starikov, Ekaterina Khrameeva, Mikhail S. Gelfand:
Prediction of chromatin spatial structure characteristics using machine learning methods. BIBM 2018: 2489 - [c4]Olga Tsoy, Aleksandra A. Galitsyna, Ekaterina Khrameeva, Sergey V. Ulianov, Mikhail S. Gelfand, Sergey V. Razin:
The chromatin structure of Dictyostelium discoideum. BIBM 2018: 2492 - [c3]Sergey V. Ulianov, Semen A. Doronin, Ekaterina E. Khrameeva, Pavel I. Kos, Sergey S. Starikov, Aleksandra A. Galitsyna, Artem Luzhin, Mikhail S. Gelfand, Alexander V. Chertovich, Sergey V. Razin, Yuri Y. Shevelyov:
Nuclear lamina maintains global spatial organization of chromatin in Drosophila cultured cells. BIBM 2018: 2493 - [c2]Vlada S. Zakharova, Aleksandra A. Galitsyna, Kirill E. Polovnikov, Ekaterina E. Khrameeva, Mariya D. Logacheva, Elena A. Mikhaleva, Egor S. Vassetzky, Aleksey A. Gavrilov, Yuri Y. Shevelev, Sergey K. Nechaev, Sergey V. Ulianov, Sergey V. Razin:
Single-cell Hi-C demonstrates that TADs are stable units of Drosophila genome folding that persist in individual cells. BIBM 2018: 2494 - 2012
- [c1]Dmitri D. Pervouchine, Ekaterina Khrameeva, Marina Pichugina, Olexii Nikolaienko, Mikhail S. Gelfand, Petr Rubtsov, Andrey A. Mironov:
Evidence for Widespread Association of Mammalian Splicing and Conserved Long-Range RNA Structures. RECOMB 2012: 199
Coauthor Index
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