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2020 – today
- 2024
[j23]Yike Shen, Arce Domingo-Relloso, Allison Kupsco, Marianthi-Anna Kioumourtzoglou, Maria Tellez-Plaza, Jason G. Umans, Amanda M. Fretts, Ying Zhang, Peter F. Schnatz, Ramon Casanova, Lisa Warsinger Martin, Steve Horvath, JoAnn E. Manson, Shelley A Cole, Haotian Wu, Eric A Whitsel, Andrea A. Baccarelli, Ana Navas-Acien, Feng Gao
:
AESurv: autoencoder survival analysis for accurate early prediction of coronary heart disease. Briefings Bioinform. 25(6) (2024)- [j22]Mary E. Sehl, Elizabeth Crabb Breen, Roger Shih, Fengxue Li, Joshua Zhang, Peter Langfelder, Steve Horvath, Jay H. Bream, Priya Duggal, Jeremy Martinson, Steven M. Wolinsky, Otoniel Martinez-Maza, Christina M. Ramirez, Beth D. Jamieson:
Decreased but persistent epigenetic age acceleration is associated with changes in T-cell subsets after initiation of highly active antiretroviral therapy in persons living with HIV. Frontiers Bioinform. 4 (2024) - [j21]Joshua Zhang, Mary E. Sehl, Roger Shih, Elizabeth Crabb Breen, Fengxue Li, Ake T. Lu, Jay H. Bream, Priya Duggal, Jeremy Martinson, Steven M. Wolinsky, Otoniel Martinez-Maza, Christina M. Ramirez, Steve Horvath, Beth D. Jamieson:
Effects of highly active antiretroviral therapy initiation on epigenomic DNA methylation in persons living with HIV. Frontiers Bioinform. 4 (2024) - 2023
- [j20]Wubin Ding, Diljeet Kaur, Steve Horvath, Wanding Zhou:
Comparative epigenome analysis using Infinium DNA methylation BeadChips. Briefings Bioinform. 24(1) (2023)
2010 – 2019
- 2013
- [j19]Lin Song, Peter Langfelder, Steve Horvath:
Random generalized linear model: a highly accurate and interpretable ensemble predictor. BMC Bioinform. 14: 5 (2013) - [j18]John M. O. Ranola, Peter Langfelder, Kenneth Lange, Steve Horvath:
Cluster and propensity based approximation of a network. BMC Syst. Biol. 7: 21 (2013) - 2012
- [j17]Lin Song, Peter Langfelder, Steve Horvath:
Comparison of co-expression measures: mutual information, correlation, and model based indices. BMC Bioinform. 13: 328 (2012) - [j16]Michael C. Oldham, Peter Langfelder, Steve Horvath:
Network methods for describing sample relationships in genomic datasets: application to Huntington's disease. BMC Syst. Biol. 6: 63 (2012) - [j15]Austin T. Hilliard, Julie E. Miller, Steve Horvath, Stephanie A. White:
Distinct Neurogenomic States in Basal Ganglia Subregions Relate Differently to Singing Behavior in Songbirds. PLoS Comput. Biol. 8(11) (2012) - 2011
- [j14]Jeremy A. Miller, Chaochao Cai, Peter Langfelder, Daniel H. Geschwind, Sunil M. Kurian, Daniel R. Salomon, Steve Horvath:
Strategies for aggregating gene expression data: The collapseRows R function. BMC Bioinform. 12: 322 (2011) - [j13]Christopher C. Park, Greg D. Gale, Simone de Jong, Anatole Ghazalpour, Brian J. Bennett, Charles R. Farber, Peter Langfelder, Andy Lin, Arshad H. Khan, Eleazar Eskin, Steve Horvath, Aldons J. Lusis, Roel A. Ophoff, Desmond J. Smith:
Gene networks associated with conditional fear in mice identified using a systems genetics approach. BMC Syst. Biol. 5: 43 (2011) - [j12]Peter Langfelder, Rui Luo, Michael C. Oldham, Steve Horvath:
Is My Network Module Preserved and Reproducible? PLoS Comput. Biol. 7(1) (2011) - [p1]Tova Fuller, Peter Langfelder, Angela P. Presson, Steve Horvath:
Review of Weighted Gene Coexpression Network Analysis. Handbook of Statistical Bioinformatics 2011: 369-388 - 2010
- [j11]Jeanette A. Mumford, Steve Horvath, Michael C. Oldham, Peter Langfelder, Daniel H. Geschwind, Russell A. Poldrack:
Detecting network modules in fMRI time series: A weighted network analysis approach. NeuroImage 52(4): 1465-1476 (2010) - [c5]Peter Langfelder, Tova Fuller, Steve Horvath:
Comparing Robust Methods for Defining Directed Networks and Their Hub Nodes. BIOCOMP 2010: 687-692
2000 – 2009
- 2008
- [j10]Peter Langfelder, Bin Zhang, Steve Horvath:
Defining clusters from a hierarchical cluster tree: the Dynamic Tree Cut package for R. Bioinform. 24(5): 719-720 (2008) - [j9]Peter Langfelder, Steve Horvath:
WGCNA: an R package for weighted correlation network analysis. BMC Bioinform. 9 (2008) - [j8]Jason E. Aten, Tova Fuller, Aldons J. Lusis, Steve Horvath:
Using genetic markers to orient the edges in quantitative trait networks: The NEO software. BMC Syst. Biol. 2: 34 (2008) - [j7]Angela P. Presson, Eric M. Sobel, Jeanette C. Papp, Charlyn J. Suarez, Toni Whistler, Mangalathu S. Rajeevan, Suzanne D. Vernon, Steve Horvath:
Integrated Weighted Gene Co-expression Network Analysis with an Application to Chronic Fatigue Syndrome. BMC Syst. Biol. 2: 95 (2008) - [j6]Steve Horvath, Jun Dong:
Geometric Interpretation of Gene Coexpression Network Analysis. PLoS Comput. Biol. 4(8) (2008) - 2007
- [j5]Ai Li, Steve Horvath:
Network neighborhood analysis with the multi-node topological overlap measure. Bioinform. 23(2): 222-231 (2007) - [j4]Andy M. Yip, Steve Horvath:
Gene network interconnectedness and the generalized topological overlap measure. BMC Bioinform. 8 (2007) - [j3]Jun Dong, Steve Horvath:
Understanding network concepts in modules. BMC Syst. Biol. 1: 24 (2007) - [j2]Peter Langfelder, Steve Horvath:
Eigengene networks for studying the relationships between co-expression modules. BMC Syst. Biol. 1: 54 (2007) - 2006
- [c4]Ai Li, Steve Horvath:
The Multi-Node Topological Overlap Measure For Gene Neighborhood Analysis. BIOCOMP 2006: 445-450 - [c3]Andy M. Yip, Steve Horvath:
The Generalized Topological Overlap Matrix for Detecting Modules in Gene Networks. BIOCOMP 2006: 451-457 - [c2]Wei Zhao, Paul Mischel, Marc Carlson, Bin Zhang, Stanley Nelson, Steve Horvath:
A Network-Based Gene Screening Approach For Improving the Validation Success of Microarrays. BIOCOMP 2006: 458-464 - [c1]Steve Horvath, Jun Dong, Andy M. Yip:
The Relationship Between Intramodular Connectivity and Gene Significance in Co-Expression Networks. BIOCOMP 2006: 465-471 - 2005
- [j1]Bin Zhang, Steve Horvath:
Ridge regression based hybrid genetic algorithms for multi-locus quantitative trait mapping. Int. J. Bioinform. Res. Appl. 1(3): 261-272 (2005)
Coauthor Index
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last updated on 2024-12-02 22:33 CET by the dblp team
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