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ORCIDYukihiro Murakami
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Books and Theses
- 2021
[b1]Yukihiro Murakami:
On Phylogenetic Encodings and Orchard Networks. Delft University of Technology, Netherlands, 2021
Journal Articles
- 2024
- [j11]Yukihiro Murakami
:
The Burning Number Conjecture is True for Trees without Degree-2 Vertices. Graphs Comb. 40(4): 82 (2024) - [j10]Elise Deen, Leo van Iersel, Remie Janssen, Mark Jones, Yukihiro Murakami, Norbert Zeh:
A near-linear kernel for bounded-state parsimony distance. J. Comput. Syst. Sci. 140: 103477 (2024) - [j9]Katharina T. Huber, Leo van Iersel, Remie Janssen, Mark Jones, Vincent Moulton, Yukihiro Murakami, Charles Semple:
Orienting undirected phylogenetic networks. J. Comput. Syst. Sci. 140: 103480 (2024) - 2023
- [j8]Leo van Iersel, Vincent Moulton, Yukihiro Murakami:
Polynomial invariants for cactuses. Inf. Process. Lett. 182: 106394 (2023) - 2022
- [j7]Leo van Iersel, Remie Janssen, Mark Jones, Yukihiro Murakami, Norbert Zeh:
A Practical Fixed-Parameter Algorithm for Constructing Tree-Child Networks from Multiple Binary Trees. Algorithmica 84(4): 917-960 (2022) - [j6]Katharina T. Huber, Leo van Iersel, Remie Janssen, Mark Jones, Vincent Moulton, Yukihiro Murakami:
Level-2 networks from shortest and longest distances. Discret. Appl. Math. 306: 138-165 (2022) - 2021
- [j5]Leo van Iersel, Remie Janssen, Mark Jones, Yukihiro Murakami, Norbert Zeh:
A unifying characterization of tree-based networks and orchard networks using cherry covers. Adv. Appl. Math. 129: 102222 (2021) - [j4]Remie Janssen, Yukihiro Murakami:
On cherry-picking and network containment. Theor. Comput. Sci. 856: 121-150 (2021) - 2020
- [j3]Leo van Iersel, Vincent Moulton, Yukihiro Murakami:
Reconstructibility of unrooted level-k phylogenetic networks from distances. Adv. Appl. Math. 120: 102075 (2020) - [j2]Momoko Hayamizu, Katharina T. Huber, Vincent Moulton, Yukihiro Murakami:
Recognizing and realizing cactus metrics. Inf. Process. Lett. 157: 105916 (2020) - [j1]Leo van Iersel, Remie Janssen, Mark Jones, Yukihiro Murakami, Norbert Zeh:
Polynomial-Time Algorithms for Phylogenetic Inference Problems Involving Duplication and Reticulation. IEEE ACM Trans. Comput. Biol. Bioinform. 17(1): 14-26 (2020)
Conference and Workshop Papers
- 2024
- [c6]Daniel J. Harvey, Jesper Jansson, Mikolaj Marciniak, Yukihiro Murakami:
Resolving Unresolved Resolved and Unresolved Triplets Consistency Problems. IWOCA 2024: 193-205 - 2023
- [c5]Leo van Iersel, Mark Jones, Esther Julien, Yukihiro Murakami:
Making a Network Orchard by Adding Leaves. WABI 2023: 7:1-7:20 - 2020
- [c4]Remie Janssen, Mark Jones, Yukihiro Murakami:
Combining Networks Using Cherry Picking Sequences. AlCoB 2020: 77-92 - [c3]Remie Janssen, Yukihiro Murakami:
Linear Time Algorithm for Tree-Child Network Containment. AlCoB 2020: 93-107 - 2018
- [c2]Leo van Iersel, Remie Janssen, Mark Jones, Yukihiro Murakami, Norbert Zeh:
Polynomial-Time Algorithms for Phylogenetic Inference Problems. AlCoB 2018: 37-49 - 2010
- [c1]Yukihiro Murakami, Masao Yamagishi, Masahiro Yukawa, Isao Yamada:
A sparse adaptive filtering using time-varying soft-thresholding techniques. ICASSP 2010: 3734-3737
Informal and Other Publications
- 2024
- [i7]Jordan Dempsey, Leo van Iersel, Mark Jones, Yukihiro Murakami, Norbert Zeh:
A Wild Sheep Chase Through an Orchard. CoRR abs/2408.10769 (2024) - 2023
- [i6]Leo van Iersel, Mark Jones, Esther Julien, Yukihiro Murakami:
Making a Network Orchard by Adding Leaves. CoRR abs/2305.03106 (2023) - [i5]Shunsuke Maeda, Yusuke Kaneko, Hideaki Muramatsu, Yukihiro Murakami, Momoko Hayamizu:
Orienting undirected phylogenetic networks to tree-child network. CoRR abs/2305.10162 (2023) - 2019
- [i4]Katharina T. Huber, Leo van Iersel, Remie Janssen, Mark Jones, Vincent Moulton, Yukihiro Murakami, Charles Semple:
Rooting for phylogenetic networks. CoRR abs/1906.07430 (2019) - [i3]Leo van Iersel, Remie Janssen, Mark Jones, Yukihiro Murakami, Norbert Zeh:
A Practical Fixed-Parameter Algorithm for Constructing Tree-Child Networks from Multiple Binary Trees. CoRR abs/1907.08474 (2019) - [i2]Momoko Hayamizu, Katharina T. Huber, Vincent Moulton, Yukihiro Murakami:
Recognizing and realizing cactus metrics. CoRR abs/1908.01524 (2019) - [i1]Remie Janssen, Mark Jones, Yukihiro Murakami:
Combining Networks using Cherry Picking Sequences. CoRR abs/1912.03999 (2019)
Coauthor Index
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