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ORCIDStuart A. Cook
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- affiliation: Imperial College London, Hammersmith Hospital, UK
- affiliation: uke National University of Singapore
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2020 – today
- 2021
[c9]Shuo Wang, Chen Qin
, Nicoló Savioli, Chen Chen, Declan P. O'Regan, Stuart A. Cook, Yike Guo, Daniel Rueckert, Wenjia Bai:
Joint Motion Correction and Super Resolution for Cardiac Segmentation via Latent Optimisation. MICCAI (3) 2021: 14-24- [i8]Shuo Wang, Chen Qin, Nicoló Savioli, Chen Chen, Declan P. O'Regan, Stuart A. Cook, Yike Guo, Daniel Rueckert, Wenjia Bai:
Joint Motion Correction and Super Resolution for Cardiac Segmentation via Latent Optimisation. CoRR abs/2107.03887 (2021) - [i7]Nicoló Savioli, Antonio de Marvao, Wenjia Bai, Shuo Wang, Stuart A. Cook, Calvin W. L. Chin, Daniel Rueckert, Declan P. O'Regan:
Joint Semi-supervised 3D Super-Resolution and Segmentation with Mixed Adversarial Gaussian Domain Adaptation. CoRR abs/2107.07975 (2021) - 2020
- [j10]Ernest Turro, William J. Astle, Karyn Megy, Stefan Gräf, Daniel Greene, Olga Shamardina, Hana Lango Allen, Alba Sanchis-Juan, Mattia Frontini, Chantal Thys, Jonathan Stephens, Rutendo Mapeta, Oliver S. Burren, Kate Downes, Matthias Haimel, Salih Tuna, Sri V. V. Deevi, Timothy J. Aitman, David L. H. Bennett, Paul Calleja, Keren Carss, Mark J. Caulfield, Patrick F. Chinnery, Peter H. Dixon, Daniel P. Gale, Roger James, Ania Koziell, Michael A. Laffan, Adam P. Levine, Eamonn R. Maher, Hugh S. Markus, Joannella Morales, Nicholas W. Morrell, Andrew D. Mumford, Elizabeth Ormondroyd, Stuart Rankin, Augusto Rendon, Sylvia Richardson, Irene Roberts, Noemi B. A. Roy, Moin A. Saleem, Kenneth G. C. Smith, Hannah Stark, Rhea Y. Y. Tan, Andreas C. Themistocleous, Adrian J. Thrasher, Hugh Watkins, Andrew R. Webster, Martin R. Wilkins, Catherine Williamson, James Whitworth, Sean Humphray, David R. Bentley, Stephen Abbs, Lara Abulhoul, Julian Adlard, Munaza Ahmed, Hana Alachkar, David J. Allsup, Jeff Almeida-King, Philip Ancliff, Richard Antrobus, Ruth Armstrong, Gavin Arno, Sofie Ashford, Anthony Attwood, Paul Aurora, Christian Babbs, Chiara Bacchelli, Tamam Bakchoul, Siddharth Banka, Tadbir Bariana, Julian Barwell, Joana Batista, Helen E. Baxendale, Phil L. Beales, Agnieszka Bierzynska, Tina Biss, Maria A. K. Bitner-Glindzicz, Graeme C. M. Black, Marta Bleda, Iulia Blesneac, Detlef Bockenhauer, Harm Bogaard, Christian J. Bourne, Sara Boyce, John R. Bradley, Eugene Bragin, Gerome Breen, Paul Brennan, Carole Brewer, Matthew Brown, Andrew C. Browning, Michael J. Browning, Rachel J. Buchan, Matthew S. Buckland, Teofila Bueser, Carmen Bugarin Diz, John Burn, Siobhan O. Burns, Nigel Burrows, Carolyn Campbell, Gerald Carr-White, Ruth Casey, Jenny Chambers, John Chambers, Melanie M. Y. Chan, Calvin Cheah, Floria Cheng, Manali Chitre, Martin T. Christian, Colin Church, Jill Clayton-Smith, Maureen Cleary, Naomi Clements Brod, Gerry Coghlan, Elizabeth Colby, Trevor R. P. Cole, Janine Collins, Peter W. Collins, Camilla Colombo, Cecilia J. Compton, Robin Condliffe, Stuart A. Cook, H. Terence Cook, Nichola Cooper, Paul A. Corris, Abigail Furnell, Fiona Cunningham, Nicola S. Curry, Antony J. Cutler, Matthew J. Daniels, Mehul Dattani, Louise C. Daugherty, John Davis, Anthony De Soyza, Timothy Dent, Charu Deshpande, Eleanor F. Dewhurst, Sofia Douzgou, Anna M. Drazyk, Elizabeth Drewe, Daniel Duarte, Tina Dutt, J. David M. Edgar, Karen Edwards, William Egner, Melanie N. Ekani, Perry Elliott, Wendy N. Erber, Marie Erwood, Maria C. Estiu, Dafydd Gareth Evans, Gillian Evans, Tamara Everington, Mélanie Eyries, Hiva Fassihi, Remi Favier, Jack Findhammer, Debra Fletcher, Frances A. Flinter, R. Andres Floto, Tom Fowler, James Fox, Amy J. Frary, Courtney E. French, Kathleen Freson, Henning Gall, Vijeya Ganesan, Michael Gattens, Claire Geoghegan, Terence S. A. Gerighty, Ali G. Gharavi, Stefano Ghio, Hossein-Ardeschir Ghofrani, J. Simon R. Gibbs, Kate Gibson, Kimberly C. Gilmour, Barbara Girerd, Nicholas S. Gleadall, Sarah Goddard, David B. Goldstein, Keith Gomez, Pavels Gordins, David Gosal, Jodie Graham, Luigi Grassi, Lynn Greenhalgh, Andreas Greinacher, Paolo Gresele, Philip Griffiths, Sofia Grigoriadou, Russell J. Grocock, Detelina Grozeva, Mark Gurnell, Scott Hackett, Charaka Hadinnapola, William M. Hague, Rosie Hague, Matthew Hall, Helen L. Hanson, Eshika Haque, Kirsty Harkness, Andrew R. Harper, Claire L. Harris, Daniel Hart, Ahamad Hassan, Grant Hayman, Alex Henderson, Archana Herwadkar, Jonathan Hoffman, Simon Holden, Rita Horvath, Henry Houlden, Arjan C. Houweling, Luke S. G. E. Howard, Fengyuan Hu, Gavin Hudson, Joseph Hughes, Aarnoud P. Huissoon, Marc Humbert, Sarah Hunter, Matthew E. Hurles, Melita Irving, Louise Izatt, Sally A. Johnson, Stephen Jolles, Jennifer Jolley, Dragana Josifova, Neringa Jurkute, Tim Karten, Johannes Karten, Mary A. Kasanicki, Hanadi Kazkaz, Rashid Kazmi, Peter Kelleher, Anne M. Kelly, Wilf Kelsall, Carly Kempster, David G. Kiely, Nathalie Kingston, Robert Klima, Nils Koelling, Myrto Kostadima, Gabor Kovacs, Roman Kreuzhuber, Taco W. Kuijpers, Ajith Kumar, Dinakantha Kumararatne, Manju A. Kurian, Fiona Lalloo, Michele Lambert, Allan Lawrie, D. Mark Layton, Nick Lench, Claire Lentaigne, Tracy Lester, Rachel Linger, Hilary Longhurst, Lorena E. Lorenzo, Eleni Louka, Paul A. Lyons, Rajiv D. Machado, Robert V. MacKenzie Ross, Bella Madan, Jesmeen Maimaris, Samantha Malka, Sarah Mangles, Kevin J. Marchbank, Stephen Marks, Hanns-Ulrich Marschall, Andrew G. Marshall, Jennifer Martin, Mary Mathias, Emma Matthews, Heather Maxwell, Paul McAlinden, Mark I. McCarthy, Harriet McKinney, Aoife McMahon, Stuart Meacham, Adam J. Mead, Ignacio Medina Castello, Sarju G. Mehta, Michel Michaelides, Carolyn Millar, Shehla N. Mohammed, Shahin Moledina, David Montani, Anthony T. Moore, Monika Mozere, Keith W. Muir, Andrea H. Nemeth, William G. Newman, Michael Newnham, Sadia Noorani, Paquita Nurden, Jennifer O'Sullivan, Samya Obaji, Chris Odhams, Steven Okoli, Andrea Olschewski, Horst Olschewski, Kai Ren Ong, S. Helen Oram, Willem H. Ouwehand, Claire Palles, Sofia Papadia, Soo-Mi Park, David Parry, Smita Patel, Joan Paterson, Andrew Peacock, Simon H. Pearce, John Peden, Kathelijne Peerlinck, Christopher J. Penkett, Joanna Pepke-Zaba, Romina Petersen, Clarissa Pilkington, Kenneth E. S. Poole, Radhika Prathalingam, Bethan Psaila, Angela Pyle, Richard Quinton, Shamima Rahman, Anupama Rao, F. Lucy Raymond, Paula J. Rayner-Matthews, Christine Rees, Tara Renton, Christopher J. Rhodes, Andrew S. C. Rice, Alex Richter, Leema Robert, Anthony Rogers, Sarah J. Rose, Robert Ross-Russell, Catherine Roughley, Deborah M. Ruddy, Omid Sadeghi-Alavijeh, Nilesh J. Samani, Crina Samarghitean, Ravishankar B. Sargur, Robert N. Sarkany, Simon Satchell, Sinisa Savic, John A. Sayer, Genevieve Sayer, Laura Scelsi, Andrew M. Schaefer, Sol Schulman, Richard Scott, Marie Scully, Claire Searle, Werner Seeger, Arjune Sen, W. A. Carrock Sewell, Denis Seyres, Neil Shah, Susan E. Shapiro, Adam C. Shaw, Patrick J. Short, Keith Sibson, Lucy Side, Ilenia Simeoni, Michael A. Simpson, Matthew C. Sims, Suthesh Sivapalaratnam, Damian Smedley, Katherine R. Smith, Katie Snape, Nicole Soranzo, Florent Soubrier, Laura Southgate, Olivera Spasic-Boskovic, Simon Staines, Emily Staples, Charles A. Steward, Kathleen E. Stirrups, Alex Stuckey, Jay Suntharalingam, Emilia M. Swietlik, Petros Syrris, R. Campbell Tait, Kate Talks, Katie Tate, John M. Taylor, Jenny C. Taylor, James E. Thaventhiran, Ellen Thomas, David Thomas, Moira J. Thomas, Patrick Thomas, Kate Thomson, Glen Threadgold, Tobias Tilly, Marc Tischkowitz, Catherine Titterton, John A. Todd, Cheng-Hock Toh, Bas Tolhuis, Ian P. Tomlinson, Mark Toshner, Matthew Traylor, Carmen Treacy, Paul Treadaway, Richard Trembath, Wojciech Turek, Philip Twiss, Tom Vale, Chris Van Geet, Natalie van Zuydam, Maarten Vandekuilen, Anthony M. Vandersteen, Marta Vazquez-Lopez, Julie von Ziegenweidt, Anton Vonk-Noordegraaf, Annette Wagner, Quinten Waisfisz, Suellen M. Walker, Neil Walker, Klaudia Walter, James S. Ware, Christopher Watt, Lucy Wedderburn, Wei Wei, Steven B. Welch, Julie Wessels, Sarah K. Westbury, John-Paul Westwood, John Wharton, Deborah Whitehorn, Andrew O. M. Wilkie, Brian T. Wilson, Edwin K. S. Wong, Nicholas W. Wood, Yvette Wood, Christopher Geoffrey Woods, Emma R. Woodward, Stephen J. Wort, Austen Worth, Michael Wright, Katherine Yates, Patrick F. K. Yong, Timothy Young, Ping Yu, Patrick Yu-Wai-Man, Eliska Zlamalova:
Whole-genome sequencing of patients with rare diseases in a national health system. Nat. 583(7814): 96-102 (2020) - [j9]Carlo Biffi, Juan J. Cerrolaza, Giacomo Tarroni, Wenjia Bai, Antonio de Marvao, Ozan Oktay, Christian Ledig, Loïc Le Folgoc, Konstantinos Kamnitsas, Georgia Doumou, Jinming Duan, Sanjay K. Prasad, Stuart A. Cook, Declan P. O'Regan, Daniel Rueckert:
Explainable Anatomical Shape Analysis Through Deep Hierarchical Generative Models. IEEE Trans. Medical Imaging 39(6): 2088-2099 (2020)
2010 – 2019
- 2019
- [j8]Ghalib A. Bello, Timothy J. W. Dawes, Jinming Duan, Carlo Biffi, Antonio de Marvao, Luke S. G. E. Howard, J. Simon R. Gibbs, Martin R. Wilkins, Stuart A. Cook, Daniel Rueckert, Declan P. O'Regan:
Deep-learning cardiac motion analysis for human survival prediction. Nat. Mach. Intell. 1(2): 95-104 (2019) - [j7]Giacomo Tarroni, Ozan Oktay, Wenjia Bai, Andreas Schuh, Hideaki Suzuki, Jonathan Passerat-Palmbach, Antonio de Marvao, Declan P. O'Regan, Stuart A. Cook, Ben Glocker, Paul M. Matthews, Daniel Rueckert:
Learning-Based Quality Control for Cardiac MR Images. IEEE Trans. Medical Imaging 38(5): 1127-1138 (2019) - [c8]Carlo Biffi, Juan J. Cerrolaza, Giacomo Tarroni, Antonio de Marvao, Stuart A. Cook, Declan P. O'Regan, Daniel Rueckert:
3D High-Resolution Cardiac Segmentation Reconstruction From 2D Views Using Conditional Variational Autoencoders. ISBI 2019: 1643-1646 - [i6]Carlo Biffi, Juan J. Cerrolaza, Giacomo Tarroni, Antonio de Marvao, Stuart A. Cook, Declan P. O'Regan, Daniel Rueckert:
3D High-Resolution Cardiac Segmentation Reconstruction from 2D Views using Conditional Variational Autoencoders. CoRR abs/1902.11000 (2019) - [i5]Carlo Biffi, Juan J. Cerrolaza, Giacomo Tarroni, Wenjia Bai, Ozan Oktay, Loïc Le Folgoc, Konstantinos Kamnitsas, Antonio de Marvao, Georgia Doumou, Jinming Duan, Sanjay K. Prasad, Stuart A. Cook, Declan P. O'Regan, Daniel Rueckert:
Explainable Shape Analysis through Deep Hierarchical Generative Models: Application to Cardiac Remodeling. CoRR abs/1907.00058 (2019) - 2018
- [j6]Carlo Biffi, Antonio de Marvao, Mark I Attard, Timothy J. W. Dawes, Nicola Whiffin, Wenjia Bai, Wenzhe Shi, Catherine Francis, Hannah Meyer, Rachel J. Buchan, Stuart A. Cook, Daniel Rueckert, Declan P. O'Regan:
Three-dimensional cardiovascular imaging-genetics: a mass univariate framework. Bioinform. 34(1): 97-103 (2018) - [j5]Ozan Oktay, Enzo Ferrante, Konstantinos Kamnitsas, Mattias P. Heinrich, Wenjia Bai, Jose Caballero, Stuart A. Cook, Antonio de Marvao, Timothy Dawes, Declan P. O'Regan, Bernhard Kainz, Ben Glocker, Daniel Rueckert:
Anatomically Constrained Neural Networks (ACNNs): Application to Cardiac Image Enhancement and Segmentation. IEEE Trans. Medical Imaging 37(2): 384-395 (2018) - [c7]Giacomo Tarroni, Ozan Oktay, Matthew Sinclair, Wenjia Bai, Andreas Schuh, Hideaki Suzuki, Antonio de Marvao, Declan P. O'Regan, Stuart A. Cook, Daniel Rueckert:
A Comprehensive Approach for Learning-Based Fully-Automated Inter-slice Motion Correction for Short-Axis Cine Cardiac MR Image Stacks. MICCAI (1) 2018: 268-276 - [c6]Carlo Biffi, Ozan Oktay, Giacomo Tarroni, Wenjia Bai, Antonio M. Simoes Monteiro de Marvao, Georgia Doumou, Martin Rajchl, Reem Bedair, Sanjay K. Prasad, Stuart A. Cook, Declan P. O'Regan, Daniel Rueckert:
Learning Interpretable Anatomical Features Through Deep Generative Models: Application to Cardiac Remodeling. MICCAI (2) 2018: 464-471 - [i4]Carlo Biffi, Ozan Oktay, Giacomo Tarroni, Wenjia Bai, Antonio M. Simoes Monteiro de Marvao, Georgia Doumou, Martin Rajchl, Reem Bedair, Sanjay K. Prasad, Stuart A. Cook, Declan P. O'Regan, Daniel Rueckert:
Learning Interpretable Anatomical Features Through Deep Generative Models: Application to Cardiac Remodeling. CoRR abs/1807.06843 (2018) - [i3]Giacomo Tarroni, Ozan Oktay, Matthew Sinclair, Wenjia Bai, Andreas Schuh, Hideaki Suzuki, Antonio de Marvao, Declan P. O'Regan, Stuart A. Cook, Daniel Rueckert:
A Comprehensive Approach for Learning-based Fully-Automated Inter-slice Motion Correction for Short-Axis Cine Cardiac MR Image Stacks. CoRR abs/1810.02201 (2018) - [i2]Ghalib A. Bello, Timothy J. W. Dawes, Jinming Duan, Carlo Biffi, Antonio de Marvao, Luke S. G. E. Howard, J. Simon R. Gibbs, Martin R. Wilkins, Stuart A. Cook, Daniel Rueckert, Declan P. O'Regan:
Deep learning cardiac motion analysis for human survival prediction. CoRR abs/1810.03382 (2018) - 2017
- [j4]Ozan Oktay, Wenjia Bai, Ricardo Guerrero, Martin Rajchl, Antonio de Marvao, Declan P. O'Regan, Stuart A. Cook, Mattias P. Heinrich, Ben Glocker, Daniel Rueckert:
Stratified Decision Forests for Accurate Anatomical Landmark Localization in Cardiac Images. IEEE Trans. Medical Imaging 36(1): 332-342 (2017) - [c5]Giacomo Tarroni, Ozan Oktay, Wenjia Bai, Andreas Schuh, Hideaki Suzuki, Jonathan Passerat-Palmbach, Ben Glocker, Antonio de Marvao, Declan P. O'Regan, Stuart A. Cook, Daniel Rueckert:
Learning-Based Heart Coverage Estimation for Short-Axis Cine Cardiac MR Images. FIMH 2017: 73-82 - [i1]Ozan Oktay, Enzo Ferrante, Konstantinos Kamnitsas, Mattias P. Heinrich, Wenjia Bai, Jose Caballero, Ricardo Guerrero, Stuart A. Cook, Antonio de Marvao, Timothy Dawes, Declan P. O'Regan, Bernhard Kainz, Ben Glocker, Daniel Rueckert:
Anatomically Constrained Neural Networks (ACNN): Application to Cardiac Image Enhancement and Segmentation. CoRR abs/1705.08302 (2017) - 2016
- [c4]Ozan Oktay, Giacomo Tarroni, Wenjia Bai, Antonio de Marvao, Declan P. O'Regan, Stuart A. Cook, Daniel Rueckert:
Respiratory Motion Correction for 2D Cine Cardiac MR Images using Probabilistic Edge Maps. CinC 2016 - [c3]Ozan Oktay, Wenjia Bai, Matthew C. H. Lee, Ricardo Guerrero, Konstantinos Kamnitsas, Jose Caballero, Antonio de Marvao, Stuart A. Cook, Declan P. O'Regan, Daniel Rueckert:
Multi-input Cardiac Image Super-Resolution Using Convolutional Neural Networks. MICCAI (3) 2016: 246-254 - 2015
- [j3]Wenjia Bai, Wenzhe Shi, Antonio M. Simoes Monteiro de Marvao, Timothy J. W. Dawes, Declan P. O'Regan, Stuart A. Cook, Daniel Rueckert:
A bi-ventricular cardiac atlas built from 1000+ high resolution MR images of healthy subjects and an analysis of shape and motion. Medical Image Anal. 26(1): 133-145 (2015) - [c2]Haiyan Wang, Wenzhe Shi, Wenjia Bai, Antonio M. Simoes Monteiro de Marvao, Timothy J. W. Dawes, Declan P. O'Regan, Philip J. Edwards, Stuart A. Cook, Daniel Rueckert:
Prediction of Clinical Information from Cardiac MRI Using Manifold Learning. FIMH 2015: 91-98 - [c1]Wenjia Bai, Devis Peressutti, Sarah Parisot, Ozan Oktay, Martin Rajchl, Declan P. O'Regan, Stuart A. Cook, Andrew P. King, Daniel Rueckert:
Beyond the AHA 17-Segment Model: Motion-Driven Parcellation of the Left Ventricle. STACOM@MICCAI 2015: 13-20 - 2014
- [j2]Sungsam Gong, James S. Ware, Roddy Walsh, Stuart A. Cook:
NECTAR: a database of codon-centric missense variant annotations. Nucleic Acids Res. 42(Database-Issue): 1013-1019 (2014) - 2010
- [j1]Enrico Petretto, Leonardo Bottolo, Sarah R. Langley, Matthias Heinig, Chris McDermott-Roe, Rizwan Sarwar, Michal Pravenec, Norbert Hübner, Timothy J. Aitman, Stuart A. Cook, Sylvia Richardson:
New Insights into the Genetic Control of Gene Expression using a Bayesian Multi-tissue Approach. PLoS Comput. Biol. 6(4) (2010)
Coauthor Index
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