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Journal Articles
- 2018
[j5]Seth Sims
, Atkinson G. Longmire, David S. Campo, Sumathi Ramachandran, Magdalena Medrzycki, Lilia Ganova-Raeva, Yulin Lin, Amanda Sue, Hong Thai, Alexander Zelikovsky, Yury Khudyakov:
Automated quality control for a molecular surveillance system. BMC Bioinform. 19-S(11): 358:1-358:15 (2018)- 2016
- [j4]Xiaojun Xu, Hong Thai, Kathryn M. Kitrinos, Guo-liang Xia, Anuj Gaggar, Matthew Paulson, Lilia Ganova-Raeva, Yury Khudyakov, James Lara:
Modeling the functional state of the reverse transcriptase of hepatitis B virus and its application to probing drug-protein interaction. BMC Bioinform. 17(S-8): 280 (2016) - 2012
- [j3]David S. Campo, Zoya Dimitrova, James Lara, Mike Purdy, Hong Thai, Sumathi Ramachandran, Lilia Ganova-Raeva, X. Zhai, Joseph C. Forbi, Chong-Gee Teo, Yuri Khudyakov:
Coordinated evolution of the Hepatitis B Virus Polymerase. Silico Biol. 11(5-6): 175-182 (2012) - [j2]Zoya Dimitrova, David S. Campo, Sumathi Ramachandran, Gilberto Vaughan, Lilia Ganova-Raeva, Yulin Lin, Joseph C. Forbi, Guo-liang Xia, Pavel Skums, Brian L. Pearlman, Yuri Khudyakov:
Evaluation of viral heterogeneity using next-generation sequencing, end-point limiting-dilution and mass spectrometry. Silico Biol. 11(5-6): 183-192 (2012) - [j1]Nicholas Mancuso, Bassam Tork, Pavel Skums, Lilia Ganova-Raeva, Ion I. Mandoiu, Alex Zelikovsky:
Reconstructing viral quasispecies from NGS amplicon reads. Silico Biol. 11(5-6): 237-249 (2012)
Conference and Workshop Papers
- 2014
- [c5]David S. Campo, Zoya Dimitrova, Guo-liang Xia, Pavel Skums, Lilia Ganova-Raeva, Yuri Khudyakov:
New computational methods for assessing the genetic relatedness of close viral variants. ICCABS 2014: 1 - 2013
- [c4]Pavel Skums, Olga Glebova, Alex Zelikovsky, Zoya Dimitrova, David Stiven Campo Rendon, Lilia Ganova-Raeva, Yuri Khudyakov:
Alignment of DNA Mass-Spectral Profiles Using Network Flows. ISBRA 2013: 149-160 - 2012
- [c3]Nicholas Mancuso, Bassam Tork, Pavel Skums, Lilia Ganova-Raeva, Ion I. Mandoiu, Alexander Zelikovsky:
Workshop: A maximum likelihood method for quasispecies spectrum assembly. ICCABS 2012: 1 - 2011
- [c2]David S. Campo, Zoya Dimitrova, James Lara, Mike Purdy, Hong Thai, Sumathi Ramachandran, Lilia Ganova-Raeva, X. Zhai, Joseph C. Forbi, Chong-Gee Teo, Yuri Khudyakov:
Network of coordinated substitutions in the Hepatitis B virus polymerase. BIBM Workshops 2011: 64-71 - [c1]Zoya Dimitrova, David S. Campo, Sumathi Ramachandran, Gilberto Vaughan, Lilia Ganova-Raeva, Yulin Lin, Joseph C. Forbi, Guo-liang Xia, Pavel Skums, Brian L. Pearlman, Yuri Khudyakov:
Assessments of intra- and inter-host diversity of hepatitis C virus using Next Generation Sequencing and Mass spectrometry. BIBM Workshops 2011: 79-86
Coauthor Index
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