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Journal Articles
- 2020
[j10]Vyas Ramasubramani
, Bradley D. Dice, Eric S. Harper, Matthew P. Spellings, Joshua A. Anderson, Sharon C. Glotzer:
freud: A software suite for high throughput analysis of particle simulation data. Comput. Phys. Commun. 254: 107275 (2020)- 2019
- [j9]Carl S. Adorf, Vyas Ramasubramani, Joshua A. Anderson, Sharon C. Glotzer:
How to Professionally Develop Reusable Scientific Software - And When Not To. Comput. Sci. Eng. 21(2): 66-79 (2019) - 2017
- [j8]Matthew P. Spellings, Ryan L. Marson, Joshua A. Anderson, Sharon C. Glotzer:
GPU accelerated Discrete Element Method (DEM) molecular dynamics for conservative, faceted particle simulations. J. Comput. Phys. 334: 460-467 (2017) - 2016
- [j7]Michael P. Howard, Joshua A. Anderson, Arash Nikoubashman, Sharon C. Glotzer, Athanassios Z. Panagiotopoulos:
Efficient neighbor list calculation for molecular simulation of colloidal systems using graphics processing units. Comput. Phys. Commun. 203: 45-52 (2016) - [j6]Joshua A. Anderson, M. Eric Irrgang, Sharon C. Glotzer:
Scalable Metropolis Monte Carlo for simulation of hard shapes. Comput. Phys. Commun. 204: 21-30 (2016) - 2015
- [j5]Jens Glaser, Trung Dac Nguyen, Joshua A. Anderson, Pak Lui, Filippo Spiga, Jaime A. Millan, David C. Morse, Sharon C. Glotzer:
Strong scaling of general-purpose molecular dynamics simulations on GPUs. Comput. Phys. Commun. 192: 97-107 (2015) - 2013
- [j4]Joshua A. Anderson, Eric Jankowski, Thomas L. Grubb, Michael Engel, Sharon C. Glotzer:
Massively parallel Monte Carlo for many-particle simulations on GPUs. J. Comput. Phys. 254: 27-38 (2013) - 2011
- [j3]Trung Dac Nguyen, Carolyn L. Phillips, Joshua A. Anderson, Sharon C. Glotzer:
Rigid body constraints realized in massively-parallel molecular dynamics on graphics processing units. Comput. Phys. Commun. 182(11): 2307-2313 (2011) - [j2]Carolyn L. Phillips, Joshua A. Anderson, Sharon C. Glotzer:
Pseudo-random number generation for Brownian Dynamics and Dissipative Particle Dynamics simulations on GPU devices. J. Comput. Phys. 230(19): 7191-7201 (2011) - 2008
- [j1]Joshua A. Anderson, Chris D. Lorenz, Alex Travesset:
General purpose molecular dynamics simulations fully implemented on graphics processing units. J. Comput. Phys. 227(10): 5342-5359 (2008)
Conference and Workshop Papers
- 2020
- [c2]Brandon L. Butler, Vyas Ramasubramani, Joshua A. Anderson, Sharon C. Glotzer:
HOOMD-blue version 3.0 A Modern, Extensible, Flexible, Object-Oriented API for Molecular Simulations. SciPy 2020: 24-31 - 2019
- [c1]Bradley D. Dice, Vyas Ramasubramani, Eric S. Harper, Matthew P. Spellings, Joshua A. Anderson, Sharon C. Glotzer:
Analyzing Particle Systems for Machine Learning and Data Visualization with freud. SciPy 2019: 27-33
Informal and Other Publications
- 2019
- [i3]Vyas Ramasubramani, Bradley D. Dice, Eric S. Harper, Matthew P. Spellings, Joshua A. Anderson, Sharon C. Glotzer:
freud: A Software Suite for High Throughput Analysis of Particle Simulation Data. CoRR abs/1906.06317 (2019) - 2015
- [i2]Joshua A. Anderson, M. Eric Irrgang, Sharon C. Glotzer:
Scalable Metropolis Monte Carlo for simulation of hard shapes. CoRR abs/1509.04692 (2015) - 2012
- [i1]Carolyn L. Phillips, Joshua A. Anderson, Elizabeth R. Chen, Sharon C. Glotzer:
Optimal Fillings - A new spatial subdivision problem related to packing and covering. CoRR abs/1208.5752 (2012)
Coauthor Index
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