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2020 – today
- 2023
[j23]Pengli Cai, Sheng Liu
, Dachuan Zhang, Huadong Xing, Mengying Han, Dongliang Liu, Linlin Gong, Qian-Nan Hu:
SynBioTools: a one-stop facility for searching and selecting synthetic biology tools. BMC Bioinform. 24(1): 152 (2023)- 2022
- [j22]Dandan Sun, Shaozhen Ding, Pengli Cai, Dachuan Zhang, Mengying Han, Qian-Nan Hu:
BioBulkFoundary: a customized webserver for exploring biosynthetic potentials of bulk chemicals. Bioinform. 38(22): 5137-5138 (2022) - 2021
- [j21]Dongliang Liu, Mengying Han, Yu Tian, Linlin Gong, Cancan Jia, Pengli Cai, Weizhong Tu, Junni Chen, Qian-Nan Hu:
Cell2Chem: mining explored and unexplored biosynthetic chemical spaces. Bioinform. 36(21): 5269-5270 (2021) - [j20]Ailin Ren, Dachuan Zhang, Yu Tian, Pengli Cai, Tong Zhang, Qian-Nan Hu:
Transcriptor: a comprehensive platform for annotation of the enzymatic functions of transcripts. Bioinform. 37(3): 434-435 (2021) - [j19]Dachuan Zhang, Tong Zhang, Sheng Liu, Dandan Sun, Shaozhen Ding, Xingxiang Cheng, Pengli Cai, Ailin Ren, Mengying Han, Dongliang Liu, Cancan Jia, Linlin Gong, Rui Zhang, Huadong Xing, Weizhong Tu, Junni Chen, Qian-Nan Hu:
SARS2020: an integrated platform for identification of novel coronavirus by a consensus sequence-function model. Bioinform. 37(8): 1182-1183 (2021) - [j18]Mengying Han, Dachuan Zhang, Shaozhen Ding, Yu Tian, Xingxiang Cheng, Le Yuan, Dandan Sun, Dongliang Liu, Linlin Gong, Cancan Jia, Pengli Cai, Weizhong Tu, Junni Chen, Qian-Nan Hu:
ChemHub: a knowledgebase of functional chemicals for synthetic biology studies. Bioinform. 37(22): 4275-4276 (2021) - 2020
- [j17]Fu Chen, Le Yuan, Shaozhen Ding, Yu Tian, Qian-Nan Hu:
Data-driven rational biosynthesis design: from molecules to cell factories. Briefings Bioinform. 21(4): 1238-1248 (2020) - [j16]Dandan Sun, Xingxiang Cheng, Yu Tian, Shaozhen Ding, Dachuan Zhang, Pengli Cai, Qian-Nan Hu:
EnzyMine: a comprehensive database for enzyme function annotation with enzymatic reaction chemical feature. Database J. Biol. Databases Curation 2020 (2020) - [j15]Yu Tian, Ling Wu, Le Yuan, Shaozhen Ding, Fu Chen, Tong Zhang, Ailin Ren, Dachuan Zhang, Weizhong Tu, Junni Chen, Qian-Nan Hu:
BCSExplorer: a customized biosynthetic chemical space explorer with multifunctional objective function analysis. Bioinform. 36(5): 1642-1643 (2020) - [j14]Xingxiang Cheng, Dandan Sun, Dachuan Zhang, Yu Tian, Shaozhen Ding, Pengli Cai, Qian-Nan Hu:
RxnBLAST: molecular scaffold and reactive chemical environment feature extractor for biochemical reactions. Bioinform. 36(9): 2946-2947 (2020) - [j13]Tong Zhang, Yu Tian, Le Yuan, Fu Chen, Ailin Ren, Qian-Nan Hu:
Bio2Rxn: sequence-based enzymatic reaction predictions by a consensus strategy. Bioinform. 36(11): 3600-3601 (2020) - [j12]Shaozhen Ding, Yu Tian, Pengli Cai, Dachuan Zhang, Xingxiang Cheng, Dandan Sun, Le Yuan, Junni Chen, Weizhong Tu, Dong-Qing Wei, Qian-Nan Hu:
novoPathFinder: a webserver of designing novel-pathway with integrating GEM-model. Nucleic Acids Res. 48(Webserver-Issue): W477-W487 (2020)
2010 – 2019
- 2019
- [j11]Le Yuan, Yu Tian, Shaozhen Ding, Yanfang Liu, Fu Chen, Tong Zhang, Weizhong Tu, Junni Chen, Qian-Nan Hu:
PrecursorFinder: a customized biosynthetic precursor explorer. Bioinform. 35(9): 1603-1604 (2019) - 2017
- [j10]Zhe Deng, Weizhong Tu, Zixin Deng, Qian-Nan Hu:
PhID: An Open-Access Integrated Pharmacology Interactions Database for Drugs, Targets, Diseases, Genes, Side-Effects, and Pathways. J. Chem. Inf. Model. 57(10): 2395-2400 (2017) - [j9]Weizhong Tu, Shaozhen Ding, Ling Wu, Zhe Deng, Hui Zhu, Xiaotong Xu, Chen Lin, Chaonan Ye, Minlu Han, Mengna Zhao, Juan Liu, Zixin Deng, Junni Chen, Dong-Qing Wei, Qian-Nan Hu:
SynBioEcoli: a comprehensive metabolism network of engineered E. coli in three dimensional visualization. Quant. Biol. 5(1): 99-104 (2017) - 2016
- [j8]Weizhong Tu, Haoran Zhang, Juan Liu, Qian-Nan Hu:
BioSynther: a customized biosynthetic potential explorer. Bioinform. 32(3): 472-473 (2016) - [j7]Caihua Wang, Juan Liu, Fei Luo, Qian-Nan Hu:
Multi-fields model for predicting target-ligand interaction. Neurocomputing 206: 58-65 (2016) - 2015
- [j6]Caihua Wang, Juan Liu, Fei Luo, Zixing Deng, Qian-Nan Hu:
Predicting target-ligand interactions using protein ligand-binding site and ligand substructures. BMC Syst. Biol. 9(S-1): S2 (2015) - 2014
- [c1]Caihua Wang, Juan Liu, Fei Luo, Yafang Tan, Zixin Deng, Qian-Nan Hu:
Pairwise input neural network for target-ligand interaction prediction. BIBM 2014: 67-70 - 2013
- [j5]Dong-Sheng Cao, Qing-Song Xu, Qian-Nan Hu, Yi-Zeng Liang:
ChemoPy: freely available python package for computational biology and chemoinformatics. Bioinform. 29(8): 1092-1094 (2013) - 2011
- [j4]Qian-Nan Hu, Zhe Deng, Huanan Hu, Dong-Sheng Cao, Yi-Zeng Liang:
RxnFinder: biochemical reaction search engines using molecular structures, molecular fragments and reaction similarity. Bioinform. 27(17): 2465-2467 (2011)
2000 – 2009
- 2004
- [j3]Qian-Nan Hu, Yi-Zeng Liang, Xiao-Ling Peng, Hong Yin, Kai-Tai Fang:
Structural Interpretation of a Topological Index. 1. External Factor Variable Connectivity Index (EFVCI). J. Chem. Inf. Model. 44(2): 437-446 (2004) - [j2]Qian-Nan Hu, Yi-Zeng Liang, Hong Yin, Xiao-Ling Peng, Kai-Tai Fang:
Structural Interpretation of the Topological Index. 2. The Molecular Connectivity Index, the Kappa Index, and the Atom-type E-State Index. J. Chem. Inf. Model. 44(4): 1193-1201 (2004) - 2003
- [j1]Qian-Nan Hu, Yi-Zeng Liang, Ya-Li Wang, Cheng-Jian Xu, Zhong-Da Zeng, Kai-Tai Fang, Xiao-Ling Peng, Hong Yin:
External Factor Variable Connectivity Index. J. Chem. Inf. Comput. Sci. 43(3): 773-778 (2003)
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