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Journal Articles
- 2018
[j3]Laura Tipton
, Karen T. Cuenco, Laurence Huang, Ruth M. Greenblatt, Eric Kleerup, Frank C. Sciurba, Steven R. Duncan, Michael P. Donahoe, Alison Morris, Elodie Ghedin:
Measuring associations between the microbiota and repeated measures of continuous clinical variables using a lasso-penalized generalized linear mixed model. BioData Min. 11(1): 12:1-12:20 (2018)- 2016
- [j2]Bisakha Ray, Elodie Ghedin, Rumi Chunara:
Network inference from multimodal data: A review of approaches from infectious disease transmission. J. Biomed. Informatics 64: 44-54 (2016) - 2010
- [j1]Lynn M. Schriml, Cesar Arze, Suvarna Nadendla, Anurhada Ganapathy, Victor Felix, Anup Mahurkar, Katherine H. Phillippy, Aaron Gussman, Samuel V. Angiuoli, Elodie Ghedin, Owen White, Neil Hall:
GeMInA, Genomic Metadata for Infectious Agents, a geospatial surveillance pathogen database. Nucleic Acids Res. 38(Database-Issue): 754-764 (2010)
Conference and Workshop Papers
- 2023
- [c3]RyeAnne Ricker, Yin-Ting Yeh, Maria Chiara Monaco, Anita Fletcher, Steven Jacobson, Murray H. Loew, Elodie Ghedin:
Surface-enhanced Raman spectroscopy for the identification of a non-enveloped virus. AIPR 2023: 1-4 - [c2]Peng Jin, Yin-Ting Yeh, Jiarong Ye, Ziyang Wang, Yuan Xue, Na Zhang, Shengxi Huang, Elodie Ghedin, Huaguang Lu, Anthony Schmitt, Sharon X. Huang, Mauricio Terrones:
Strain-Level Identification and Analysis of Avian Coronavirus Using Raman Spectroscopy and Interpretable Machine Learning. ISBI 2023: 1-5 - 2007
- [c1]Lynn M. Schriml, Aaron Gussman, Kathy Phillippy, Samuel V. Angiuoli, Kumar Hari, Alan Goates, Ravi Jain, Tanja Davidsen, Anurhada Ganapathy, Elodie Ghedin, Steven Salzberg, Owen White, Neil Hall:
Gemina: A Web-Based Epidemiology and Genomic Metadata System Designed to Identify Infectious Agents. BioSurveillance 2007: 228-229
Informal and Other Publications
- 2022
- [i1]Jiarong Ye, Yin-Ting Yeh, Yuan Xue, Ziyang Wang, Na Zhang, He Liu, Kunyan Zhang, RyeAnne Ricker, Zhuohang Yu, Allison Roder, Nestor Perea Lopez, Lindsey Organtini, Wallace Greene, Susan Hafenstein, Huaguang Lu, Elodie Ghedin, Mauricio Terrones, Shengxi Huang, Sharon Xiaolei Huang:
Accurate Virus Identification with Interpretable Raman Signatures by Machine Learning. CoRR abs/2206.02788 (2022)
Coauthor Index
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