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Journal Articles
- 2022
[j7]Ahmad Al-Omari
, James Griffith, Ashley Scruse, Robert W. Robinson, Heinz-Bernd Schüttler, Jonathan P. Arnold:
Ensemble Methods for Identifying RNA Operons and Regulons in the Clock Network of Neurospora Crassa. IEEE Access 10: 32510-32524 (2022)- 2019
- [j6]Zhaojie Deng, Jia Hwei-Cheong, Cristian Caranica, Lingyun Wu, Xiao Qiu, Michael T. Judge, Brooke Hull, Carmen Rodriguez, James Griffith, Ahmad Al-Omari, Sam Arsenault, Heinz-Bernd Schüttler, Leidong Mao, Jonathan P. Arnold:
Single Cells of Neurospora Crassa Show Circadian Oscillations, Light Entrainment, Temperature Compensation, and Phase Synchronization. IEEE Access 7: 49403-49417 (2019) - 2018
- [j5]Ahmad Al-Omari, James Griffith, Cristian Caranica, Thiab R. Taha, Heinz-Bernd Schüttler, Jonathan P. Arnold:
Discovering Regulators in Post-Transcriptional Control of the Biological Clock of $Neurospora~crassa$ Using Variable Topology Ensemble Methods on GPUs. IEEE Access 6: 54582-54594 (2018) - 2015
- [j4]Ahmad Al-Omari, James Griffith, Michael T. Judge, Thiab R. Taha, Jonathan P. Arnold, Heinz-Bernd Schüttler:
Discovering Regulatory Network Topologies Using Ensemble Methods on GPGPUs With Special Reference to the Biological Clock of Neurospora crassa. IEEE Access 3: 27-42 (2015) - 2013
- [j3]Ahmad Al-Omari, Heinz-Bernd Schüttler, Jonathan P. Arnold, Thiab R. Taha:
Solving Nonlinear Systems of First Order Ordinary Differential Equations Using a Galerkin Finite Element Method. IEEE Access 1: 408-417 (2013) - [j2]Ahmad Al-Omari, Jonathan P. Arnold, Thiab R. Taha, Heinz-Bernd Schüttler:
Solving Large Nonlinear Systems of First-Order Ordinary Differential Equations With Hierarchical Structure Using Multi-GPGPUs and an Adaptive Runge Kutta ODE Solver. IEEE Access 1: 770-777 (2013) - 2009
- [j1]Boanerges Aleman-Meza, Yihai Yu, Heinz-Bernd Schüttler, Jonathan P. Arnold, Thiab R. Taha:
KINSOLVER: A simulator for computing large ensembles of biochemical and gene regulatory networks. Comput. Math. Appl. 57(3): 420-435 (2009)
Data and Artifacts
- 2019
- [d1]Zhaojie Deng, Jia Hwei-Cheong, Cristian Caranica, Lingyun Wu, Michael T. Judge, Brooke Hull, Carmen Rodriguez, James Griffith, Ahmad Al-Omari, Sam Arsenault, Heinz-Bernd Schüttler, Leidong Mao, Jonathan P. Arnold:
Single cells of Neurospora crassa show circadian oscillations, light entrainment, temperature compensation, and phase synchronization. IEEE DataPort, 2019
Coauthor Index
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