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James Fishbaugh

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2020 – today

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2023
[c28]
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Ye Han, Jared Vicory, Guido Gerig, Patricia Sabin, Hannah Dewey, Silvani Amin, Ana Sulentic, Christian Herz, Matthew A. Jolley, Beatriz Paniagua, James Fishbaugh:
Hierarchical Geodesic Polynomial Model for Multilevel Analysis of Longitudinal Shape. IPMI 2023: 810-821
[c27]
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Pranjal Sahu, James Fishbaugh, Jared Vicory, Asma Khan, Beatriz Paniagua:
3D Fourier Domain Adaptation for Improving CBCT Tooth Segmentation Under Scanner Parameter Shift. ISBI 2023: 1-5
[c26]
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Ye Han, James Fishbaugh, Christian E. Gonzalez, Donald A. Aboyotes, Jared Vicory, Simon Y. Tang, Beatriz Paniagua:
Geodesic Logistic Analysis of Lumbar Spine Intervertebral Disc Shapes in Supine and Standing Positions. ShapeMI@MICCAI 2023: 188-200
[c25]
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Jared Vicory, Ye Han, Juan Carlos Prieto, David Allemang, Mathieu Leclercq, Connor Bowley, Harald Scheirich, Jean-Christophe Fillion-Robin, Stephen M. Pizer, James Fishbaugh, Guido Gerig, Martin Styner, Beatriz Paniagua:
SlicerSALT: From Medical Images to Quantitative Insights of Anatomy. ShapeMI@MICCAI 2023: 201-210
[c24]
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James Fishbaugh, Ronald Zambrano, Joel S. Schuman, Gadi Wollstein, Jared Vicory, Beatriz Paniagua:
Modeling Longitudinal Optical Coherence Tomography Images for Monitoring and Analysis of Glaucoma Progression. ShapeMI@MICCAI 2023: 236-247
2021
[j3]
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Mengwei Ren, Neel Dey, James Fishbaugh, Guido Gerig:
Segmentation-Renormalized Deep Feature Modulation for Unpaired Image Harmonization. IEEE Trans. Medical Imaging 40(6): 1519-1530 (2021)
[i2]
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  - journals/corr/abs-2102-06315
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Mengwei Ren, Neel Dey, James Fishbaugh, Guido Gerig:
Segmentation-Renormalized Deep Feature Modulation for Unpaired Image Harmonization. CoRR abs/2102.06315 (2021)
2020
[c23]
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Guillaume Gisbert, Neel Dey, Hiroshi Ishikawa, Joel S. Schuman, James Fishbaugh, Guido Gerig:
Self-supervised Denoising via Diffeomorphic Template Estimation: Application to Optical Coherence Tomography. OMIA@MICCAI 2020: 72-82
[i1]
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  - journals/corr/abs-2008-08024
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Guillaume Gisbert, Neel Dey, Hiroshi Ishikawa, Joel S. Schuman, James Fishbaugh, Guido Gerig:
Self-supervised Denoising via Diffeomorphic Template Estimation: Application to Optical Coherence Tomography. CoRR abs/2008.08024 (2020)

2010 – 2019

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2019
[c22]
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James Fishbaugh, Guido Gerig:
Acceleration Controlled Diffeomorphisms For Nonparametric Image Regression. ISBI 2019: 1488-1491
[c21]
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Sungmin Hong, James Fishbaugh, Jason J. Wolff, Martin A. Styner, Guido Gerig:
Hierarchical Multi-geodesic Model for Longitudinal Analysis of Temporal Trajectories of Anatomical Shape and Covariates. MICCAI (4) 2019: 57-65
[c20]
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James Fishbaugh, Martin Styner, Karen Grewen, John H. Gilmore, Guido Gerig:
Spatiotemporal Modeling for Image Time Series with Appearance Change: Application to Early Brain Development. MBIA/MFCA@MICCAI 2019: 174-185
[c19]
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James Fishbaugh, Beatriz Paniagua, Mahmoud Mostapha, Martin Styner, Veronica Murphy, John H. Gilmore, Guido Gerig:
Model selection for spatiotemporal modeling of early childhood sub-cortical development. Image Processing 2019: 109490L
[c18]
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Batool Abbas, James Fishbaugh, Catherine Petchprapa, Riccardo Lattanzi, Guido Gerig:
Analysis of the kinematic motion of the wrist from 4D magnetic resonance imaging. Image Processing 2019: 109491E
2018
[c17]
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James Fishbaugh, Laura Pascal, Luke Fischer, Tung Nguyen, Celso Boen, Joao Goncalves, Guido Gerig, Beatriz Paniagua:
Estimating shape correspondence for populations of objects with complex topology. ISBI 2018: 1010-1013
[c16]
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Sungmin Hong, James Fishbaugh, Guido Gerig:
4D continuous medial representation by geodesic shape regression. ISBI 2018: 1014-1017
[c15]
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Jared Vicory, Laura Pascal, Pablo Hernandez, James Fishbaugh, Juan-Carlos Prieto, Mahmoud Mostapha, Chao Huang, Hina Shah, Jun-Pyo Hong, Zhiyuan Liu, Loic Michoud, Jean-Christophe Fillion-Robin, Guido Gerig, Hongtu Zhu, Stephen M. Pizer, Martin Styner, Beatriz Paniagua:
SlicerSALT: Shape AnaLysis Toolbox. ShapeMI@MICCAI 2018: 65-72
[c14]
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Sungmin Hong, James Fishbaugh, Guido Gerig:
4D Continuous Medial Representation Trajectory Estimation for Longitudinal Shape Analysis. ShapeMI@MICCAI 2018: 125-136
[c13]
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Mathilde Ravier, Sungmin Hong, Charly Girot, Hiroshi Ishikawa, Jenna Tauber, Gadi Wollstein, Joel S. Schuman, James Fishbaugh, Guido Gerig:
Analysis of Morphological Changes of Lamina Cribrosa Under Acute Intraocular Pressure Change. MICCAI (2) 2018: 364-371
2017
[j2]
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James Fishbaugh, Stanley Durrleman, Marcel Prastawa, Guido Gerig:
Geodesic shape regression with multiple geometries and sparse parameters. Medical Image Anal. 39: 1-17 (2017)
[c12]
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Avantika Vardhan, James Fishbaugh, Clement Vachet, Guido Gerig:
Longitudinal Modeling of Multi-modal Image Contrast Reveals Patterns of Early Brain Growth. MICCAI (1) 2017: 75-83
[c11]
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Charly Girot, Hiroshi Ishikawa, James Fishbaugh, Gadi Wollstein, Joel S. Schuman, Guido Gerig:
Spatiotemporal Analysis of Structural Changes of the Lamina Cribrosa. FIFI/OMIA@MICCAI 2017: 185-193
[c10]
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James Fishbaugh, Marcel Prastawa, Bo Wang, Patrick Reynolds, Stephen R. Aylward, Guido Gerig:
Data-Driven Rank Aggregation with Application to Grand Challenges. MICCAI (2) 2017: 754-762
[c9]
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Sungmin Hong, James Fishbaugh, Morteza Rezanejad, Kaleem Siddiqi, Hans J. Johnson, Jane S. Paulsen, Eun Young Kim, Guido Gerig:
Subject-specific longitudinal shape analysis by coupling spatiotemporal shape modeling with medial analysis. Image Processing 2017: 101331A
2016
[j1]
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  - journals/mia/GerigFS16
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Guido Gerig, James Fishbaugh, Neda Sadeghi:
Longitudinal modeling of appearance and shape and its potential for clinical use. Medical Image Anal. 33: 114-121 (2016)
[c8]
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Prasanna Muralidharan, James Fishbaugh, Eun Young Kim, Hans J. Johnson, Jane S. Paulsen, Guido Gerig, P. Thomas Fletcher:
Bayesian covariate selection in mixed-effects models for longitudinal shape analysis. ISBI 2016: 656-659
2015
[b1]
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James Fishbaugh:
Spatiotemporal Modeling of Anatomical Shape Complexes. University of Utah, USA, 2015
2014
[c7]
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  - conf/isbi/FishbaughPGD14
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James Fishbaugh, Marcel Prastawa, Guido Gerig, Stanley Durrleman:
Geodesic regression of image and shape data for improved modeling of 4D trajectories. ISBI 2014: 385-388
[c6]
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Prasanna Muralidharan, James Fishbaugh, Hans J. Johnson, Stanley Durrleman, Jane S. Paulsen, Guido Gerig, P. Thomas Fletcher:
Diffeomorphic Shape Trajectories for Improved Longitudinal Segmentation and Statistics. MICCAI (3) 2014: 49-56
2013
[c5]
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  - conf/gsi/FishbaughPGD13
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James Fishbaugh, Marcel Prastawa, Guido Gerig, Stanley Durrleman:
Geodesic Image Regression with a Sparse Parameterization of Diffeomorphisms. GSI 2013: 95-102
[c4]
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James Fishbaugh, Marcel Prastawa, Guido Gerig, Stanley Durrleman:
Geodesic Shape Regression in the Framework of Currents. IPMI 2013: 718-729
2012
[c3]
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James Fishbaugh, Marcel Prastawa, Stanley Durrleman, Joseph Piven, Guido Gerig:
Analysis of Longitudinal Shape Variability via Subject Specific Growth Modeling. MICCAI (1) 2012: 731-738
[c2]
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James Fishbaugh, Stanley Durrleman, Joseph Piven, Guido Gerig:
A framework for longitudinal data analysis via shape regression. Image Processing 2012: 83143K
2011
[c1]
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James Fishbaugh, Stanley Durrleman, Guido Gerig:
Estimation of Smooth Growth Trajectories with Controlled Acceleration from Time Series Shape Data. MICCAI (2) 2011: 401-408

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