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Journal Articles
- 2017
[j13]Karyn Meltz Steinberg
, Valerie A. Schneider, Can Alkan, Michael J. Montague, Wesley C. Warren, Deanna M. Church, Richard K. Wilson:
Building and Improving Reference Genome Assemblies. Proc. IEEE 105(3): 422-435 (2017)- 2016
- [j12]Alex H. Wagner, Adam C. Coffman, Benjamin J. Ainscough, Nicholas C. Spies, Zachary L. Skidmore, Katie M. Campbell, Kilannin Krysiak, Deng Pan, Joshua F. McMichael, James M. Eldred, Jason R. Walker, Richard K. Wilson, Elaine R. Mardis, Malachi Griffith, Obi L. Griffith:
DGIdb 2.0: mining clinically relevant drug-gene interactions. Nucleic Acids Res. 44(Database-Issue): 1036-1044 (2016) - 2015
- [j11]Malachi Griffith, Obi L. Griffith, Scott M. Smith, Avinash Ramu, Matthew B. Callaway, Anthony M. Brummett, Michael J. Kiwala, Adam C. Coffman, Allison A. Regier, Benjamin J. Oberkfell, Gabriel E. Sanderson, Thomas P. Mooney, Nathaniel G. Nutter, Edward A. Belter, Feiyu Du, Robert L. Long, Travis E. Abbott, Ian T. Ferguson, David L. Morton, Mark M. Burnett, James V. Weible, Joshua B. Peck, Adam Dukes, Joshua F. McMichael, Justin T. Lolofie, Brian R. Derickson, Jasreet Hundal, Zachary L. Skidmore, Benjamin J. Ainscough, Nathan D. Dees, William S. Schierding, Cyriac Kandoth, Kyung H. Kim, Charles Lu, Christopher C. Harris, Nicole Maher, Christopher A. Maher, Vincent J. Magrini, Benjamin S. Abbott, Ken Chen, Eric Clark, Indraniel Das, Xian Fan, Amy E. Hawkins, Todd G. Hepler, Todd N. Wylie, Shawn M. Leonard, William E. Schroeder, Xiaoqi Shi, Lynn K. Carmichael, Matthew R. Weil, Richard W. Wohlstadter, Gary Stiehr, Michael D. McLellan, Craig S. Pohl, Christopher A. Miller, Daniel C. Koboldt, Jason R. Walker, James M. Eldred, David E. Larson, David J. Dooling, Li Ding, Elaine R. Mardis, Richard K. Wilson:
Genome Modeling System: A Knowledge Management Platform for Genomics. PLoS Comput. Biol. 11(7) (2015) - 2014
- [j10]Christopher A. Miller, Brian S. White, Nathan D. Dees, Malachi Griffith, John S. Welch, Obi L. Griffith, Ravi Vij, Michael H. Tomasson, Timothy A. Graubert, Matthew J. Walter, Matthew J. Ellis, William S. Schierding, John F. DiPersio, Timothy J. Ley, Elaine R. Mardis, Richard K. Wilson, Li Ding:
SciClone: Inferring Clonal Architecture and Tracking the Spatial and Temporal Patterns of Tumor Evolution. PLoS Comput. Biol. 10(8) (2014) - 2012
- [j9]David E. Larson, Christopher C. Harris, Ken Chen, Daniel C. Koboldt, Travis E. Abbott, David J. Dooling, Timothy J. Ley, Elaine R. Mardis, Richard K. Wilson, Li Ding:
SomaticSniper: identification of somatic point mutations in whole genome sequencing data. Bioinform. 28(3): 311-317 (2012) - [j8]Ken Chen, John W. Wallis, Cyriac Kandoth, Joelle M. Kalicki-Veizer, Karen L. Mungall, Andrew J. Mungall, Steven J. M. Jones, Marco A. Marra, Timothy J. Ley, Elaine R. Mardis, Richard K. Wilson, John N. Weinstein, Li Ding:
BreakFusion: targeted assembly-based identification of gene fusions in whole transcriptome paired-end sequencing data. Bioinform. 28(14): 1923-1924 (2012) - 2011
- [j7]Michael C. Wendl, John W. Wallis, Ling Lin, Cyriac Kandoth, Elaine R. Mardis, Richard K. Wilson, Li Ding:
PathScan: a tool for discerning mutational significance in groups of putative cancer genes. Bioinform. 27(12): 1595-1602 (2011) - 2010
- [j6]Daniel C. Koboldt, Li Ding, Elaine R. Mardis, Richard K. Wilson:
Challenges of sequencing human genomes. Briefings Bioinform. 11(5): 484-498 (2010) - [j5]Qunyuan Zhang, Li Ding, David E. Larson, Daniel C. Koboldt, Michael D. McLellan, Ken Chen, Xiaoqi Shi, Aldi T. Kraja, Elaine R. Mardis, Richard K. Wilson, Ingrid B. Borecki, Michael A. Province:
CMDS: a population-based method for identifying recurrent DNA copy number aberrations in cancer from high-resolution data. Bioinform. 26(4): 464-469 (2010) - 2009
- [j4]Daniel C. Koboldt, Ken Chen, Todd Wylie, David E. Larson, Michael D. McLellan, Elaine R. Mardis, George M. Weinstock, Richard K. Wilson, Li Ding:
VarScan: variant detection in massively parallel sequencing of individual and pooled samples. Bioinform. 25(17): 2283-2285 (2009) - 2008
- [j3]Michael C. Wendl, Richard K. Wilson:
Aspects of coverage in medical DNA sequencing. BMC Bioinform. 9 (2008) - 2007
- [j2]Michael C. Wendl, Scott M. Smith, Craig S. Pohl, David J. Dooling, Asif T. Chinwalla, Kevin Crouse, Todd G. Hepler, Shin Leong, Lynn K. Carmichael, Mike Nhan, Benjamin J. Oberkfell, Elaine R. Mardis, LaDeana W. Hillier, Richard K. Wilson:
Design and implementation of a generalized laboratory data model. BMC Bioinform. 8 (2007) - 2004
- [j1]Todd Wylie, John C. Martin, Michael Dante, Makedonka Dautova Mitreva, Sandra W. Clifton, Asif T. Chinwalla, Robert H. Waterston, Richard K. Wilson, James P. McCarter:
Nematode.net: a tool for navigating sequences from parasitic and free-living nematodes. Nucleic Acids Res. 32(Database-Issue): 423-426 (2004)
Coauthor Index
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