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2020 – today
- 2024
[j11]Jesse A. Weller
, Remo Rohs:
Structure-Based Drug Design with a Deep Hierarchical Generative Model. J. Chem. Inf. Model. 64(16): 6450-6463 (2024)- 2022
- [j10]Brendon H. Cooper, Tsu-Pei Chiu, Remo Rohs:
Top-Down Crawl: a method for the ultra-rapid and motif-free alignment of sequences with associated binding metrics. Bioinform. 38(22): 5121-5123 (2022) - 2020
- [j9]Tsu-Pei Chiu, Beibei Xin, Nicholas Markarian, Yingfei Wang, Remo Rohs:
TFBSshape: an expanded motif database for DNA shape features of transcription factor binding sites. Nucleic Acids Res. 48(Database-Issue): D246-D255 (2020) - [j8]Jared M. Sagendorf, Nicholas Markarian, Helen M. Berman, Remo Rohs:
DNAproDB: an expanded database and web-based tool for structural analysis of DNA?protein complexes. Nucleic Acids Res. 48(Database-Issue): D277-D287 (2020)
2010 – 2019
- 2018
- [c1]Chen Chu, Zhao Li, Beibei Xin, Fengchao Peng, Chuanren Liu, Remo Rohs, Qiong Luo, Jingren Zhou:
Deep Graph Embedding for Ranking Optimization in E-commerce. CIKM 2018: 2007-2015 - 2017
- [j7]Wenxiu Ma, Lin Yang, Remo Rohs, William Stafford Noble:
DNA sequence+shape kernel enables alignment-free modeling of transcription factor binding. Bioinform. 33(19): 3003-3010 (2017) - [j6]Jared M. Sagendorf, Helen M. Berman, Remo Rohs:
DNAproDB: an interactive tool for structural analysis of DNA-protein complexes. Nucleic Acids Res. 45(Webserver-Issue): W89-W97 (2017) - 2016
- [j5]Tsu-Pei Chiu, Federico Comoglio, Tianyin Zhou, Lin Yang, Renato Paro, Remo Rohs:
DNAshapeR: an R/Bioconductor package for DNA shape prediction and feature encoding. Bioinform. 32(8): 1211-1213 (2016) - 2015
- [j4]Tsu-Pei Chiu, Lin Yang, Tianyin Zhou, Bradley J. Main, Stephen C. J. Parker, Sergey V. Nuzhdin, Thomas D. Tullius, Remo Rohs:
GBshape: a genome browser database for DNA shape annotations. Nucleic Acids Res. 43(Database-Issue): 103-109 (2015) - 2014
- [j3]Lin Yang, Tianyin Zhou, Iris Dror, Anthony Mathelier, Wyeth W. Wasserman, Raluca Gordân, Remo Rohs:
NAR Breakthrough Article: TFBSshape: a motif database for DNA shape features of transcription factor binding sites. Nucleic Acids Res. 42(Database-Issue): 148-155 (2014) - 2013
- [j2]Tianyin Zhou, Lin Yang, Yan Lu, Iris Dror, Ana Carolina Dantas Machado, Tahereh Ghane, Rosa Di Felice, Remo Rohs:
DNAshape: a method for the high-throughput prediction of DNA structural features on a genomic scale. Nucleic Acids Res. 41(Webserver-Issue): 56-62 (2013)
2000 – 2009
- 2006
- [j1]Heinz Sklenar, Daniel Wüstner, Remo Rohs:
Using internal and collective variables in Monte Carlo simulations of nucleic acid structures: Chain breakage/closure algorithm and associated Jacobians. J. Comput. Chem. 27(3): 309-315 (2006)
Coauthor Index
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