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2020 – today
- 2021
[j10]Evan Greene, Greg Finak, Leonard A. D'Amico, Nina Bhardwaj, Candice D. Church
, Chihiro Morishima, Nirasha Ramchurren, Janis M. Taube, Paul T. Nghiem, Martin A. Cheever, Steven P. Fling, Raphael Gottardo:
New interpretable machine-learning method for single-cell data reveals correlates of clinical response to cancer immunotherapy. Patterns 2(12): 100372 (2021)
2010 – 2019
- 2018
- [j9]Phu Van, Wenxin Jiang, Raphael Gottardo, Greg Finak:
ggCyto: next generation open-source visualization software for cytometry. Bioinform. 34(22): 3951-3953 (2018) - [i1]Evan Greene, Greg Finak, Raphael Gottardo:
Selective Clustering Annotated using Modes of Projections. CoRR abs/1807.10328 (2018) - 2015
- [j8]Mehrnoush Malek, Mohammad Jafar Taghiyar, Lauren Chong, Greg Finak, Raphael Gottardo, Ryan Remy Brinkman:
flowDensity: reproducing manual gating of flow cytometry data by automated density-based cell population identification. Bioinform. 31(4): 606-607 (2015) - 2014
- [j7]Andrew McDavid, Lucas Dennis, Patrick Danaher, Greg Finak, Michael Krouse, Alice Wang, Philippa Webster, Joseph Beechem, Raphael Gottardo:
Modeling Bi-modality Improves Characterization of Cell Cycle on Gene Expression in Single Cells. PLoS Comput. Biol. 10(7) (2014) - [j6]Greg Finak, Jacob Frelinger, Wenxin Jiang, Evan W. Newell, John Ramey, Mark M. Davis, Spyros A. Kalams, Stephen C. De Rosa, Raphael Gottardo:
OpenCyto: An Open Source Infrastructure for Scalable, Robust, Reproducible, and Automated, End-to-End Flow Cytometry Data Analysis. PLoS Comput. Biol. 10(8) (2014) - 2013
- [j5]Andrew McDavid, Greg Finak, Pratip K. Chattopadhyay, Maria Dominguez, Laurie Lamoreaux, Steven S. Ma, Mario Roederer, Raphael Gottardo:
Data exploration, quality control and testing in single-cell qPCR-based gene expression experiments. Bioinform. 29(4): 461-467 (2013) - 2012
- [j4]Greg Finak, Wenxin Jiang, Jorge Pardo, Adam Asare, Raphael Gottardo:
QUAliFiER: An automated pipeline for quality assessment of gated flow cytometry data. BMC Bioinform. 13: 252 (2012) - 2010
- [j3]Greg Finak, Juan-Manuel Perez, Andrew Weng, Raphael Gottardo:
Optimizing Transformations for Automated, High Throughput Analysis of Flow Cytometry Data. BMC Bioinform. 11: 546 (2010)
2000 – 2009
- 2009
- [j2]Greg Finak, Ali Bashashati, Ryan Remy Brinkman, Raphael Gottardo:
Merging Mixture Components for Cell Population Identification in Flow Cytometry. Adv. Bioinformatics 2009: 247646:1-247646:12 (2009) - 2005
- [j1]Greg Finak, N. Godin, Michael T. Hallett, François Pepin, Z. Rajabi, V. Srivastava, Z. Tang:
BIAS: Bioinformatics Integrated Application Software. Bioinform. 21(8): 1745-1746 (2005)
Coauthor Index
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