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Conference and Workshop Papers
- 2024
[c7]Scott L. Fleming, Alejandro Lozano, William J. Haberkorn, Jenelle A. Jindal, Eduardo Pontes Reis, Rahul Thapa, Louis Blankemeier, Julian Z. Genkins, Ethan Steinberg, Ashwin Nayak, Birju S. Patel, Chia-Chun Chiang, Alison Callahan, Zepeng Huo, Sergios Gatidis, Scott J. Adams, Oluseyi Fayanju, Shreya J. Shah, Thomas Savage, Ethan Goh, Akshay S. Chaudhari, Nima Aghaeepour, Christopher D. Sharp, Michael A. Pfeffer, Percy Liang, Jonathan H. Chen, Keith E. Morse, Emma P. Brunskill, Jason A. Fries, Nigam H. Shah:
MedAlign: A Clinician-Generated Dataset for Instruction Following with Electronic Medical Records. AAAI 2024: 22021-22030- [c6]Jean-Benoit Delbrouck, Pierre J. Chambon, Zhihong Chen, Maya Varma, Andrew Johnston, Louis Blankemeier, Dave Van Veen, Tan Bui, Steven Quoc Hung Truong, Curtis P. Langlotz:
RadGraph-XL: A Large-Scale Expert-Annotated Dataset for Entity and Relation Extraction from Radiology Reports. ACL (Findings) 2024: 12902-12915 - [c5]Justin Xu, Zhihong Chen, Andrew Johnston, Louis Blankemeier, Maya Varma, Jason Hom, William J. Collins, Ankit Modi, Robert Lloyd, Benjamin Hopkins, Curtis P. Langlotz, Jean-Benoit Delbrouck:
Overview of the First Shared Task on Clinical Text Generation: RRG24 and "Discharge Me!". BioNLP@ACL 2024: 85-98 - [c4]Sophie Ostmeier, Justin Xu, Zhihong Chen, Maya Varma, Louis Blankemeier, Christian Bluethgen, Arne Md, Michael E. Moseley, Curtis P. Langlotz, Akshay Chaudhari, Jean-Benoit Delbrouck:
GREEN: Generative Radiology Report Evaluation and Error Notation. EMNLP (Findings) 2024: 374-390 - 2023
- [c3]Louis Blankemeier, Jason A. Fries, Robert Tinn, Joseph Preston, Nigam Shah, Akshay Chaudhari:
Efficient Diagnosis Assignment Using Unstructured Clinical Notes. ACL (2) 2023: 485-494 - [c2]Louis Blankemeier, Theodore Zhao, Robert Tinn, Sid Kiblawi, Yu Gu, Akshay Chaudhari, Hoifung Poon, Sheng Zhang, Mu Wei, Joseph Preston:
Interactive Span Recommendation for Biomedical Text. ClinicalNLP@ACL 2023: 373-384 - 2022
- [c1]Louis Blankemeier, Isabel Gallegos, Juan Manuel Zambrano Chaves
, David J. Maron, Alexander T. Sandhu, Fátima Rodriguez, Daniel L. Rubin, Bhavik N. Patel, Marc H. Willis, Robert D. Boutin, Akshay S. Chaudhari:
Opportunistic Incidence Prediction of Multiple Chronic Diseases from Abdominal CT Imaging Using Multi-task Learning. MICCAI (8) 2022: 309-318
Informal and Other Publications
- 2024
- [i11]Zhihong Chen, Maya Varma, Jean-Benoit Delbrouck, Magdalini Paschali, Louis Blankemeier, Dave Van Veen, Jeya Maria Jose Valanarasu, Alaa Youssef, Joseph Paul Cohen, Eduardo Pontes Reis, Emily Bao Tsai, Andrew Johnston, Cameron Olsen, Tanishq Mathew Abraham, Sergios Gatidis, Akshay S. Chaudhari, Curtis P. Langlotz:
CheXagent: Towards a Foundation Model for Chest X-Ray Interpretation. CoRR abs/2401.12208 (2024) - [i10]Sebastien Baur, Zaid Nabulsi, Wei-Hung Weng, Jake Garrison, Louis Blankemeier, Sam Fishman, Christina Chen, Sujay Kakarmath, Minyoi Maimbolwa, Nsala Sanjase, Brian Shuma, Yossi Matias, Gregory S. Corrado, Shwetak N. Patel, Shravya Shetty, Shruthi Prabhakara, Monde Muyoyeta, Diego Ardila:
HeAR - Health Acoustic Representations. CoRR abs/2403.02522 (2024) - [i9]Sophie Ostmeier, Justin Xu, Zhihong Chen, Maya Varma, Louis Blankemeier, Christian Bluethgen, Arne Edward Michalson, Michael E. Moseley, Curtis P. Langlotz, Akshay S. Chaudhari, Jean-Benoit Delbrouck:
GREEN: Generative Radiology Report Evaluation and Error Notation. CoRR abs/2405.03595 (2024) - [i8]Louis Blankemeier, Joseph Paul Cohen, Ashwin Kumar, Dave Van Veen, Syed Jamal Safdar Gardezi, Magdalini Paschali, Zhihong Chen, Jean-Benoit Delbrouck, Eduardo Pontes Reis, Cesar Truyts, Christian Bluethgen, Malte Engmann Kjeldskov Jensen, Sophie Ostmeier, Maya Varma, Jeya Maria Jose Valanarasu, Zhongnan Fang, Zepeng Huo, Zaid Nabulsi, Diego Ardila, Wei-Hung Weng, Edson Amaro Júnior, Neera Ahuja, Jason Alan Fries, Nigam H. Shah, Andrew Johnston, Robert D. Boutin, Andrew Wentland, Curtis P. Langlotz, Jason Hom, Sergios Gatidis, Akshay S. Chaudhari:
Merlin: A Vision Language Foundation Model for 3D Computed Tomography. CoRR abs/2406.06512 (2024) - [i7]Asad Aali, Andrew Johnston, Louis Blankemeier, Dave Van Veen, Laura T. Derry, David Svec, Jason Hom, Robert D. Boutin, Akshay S. Chaudhari:
Detecting Underdiagnosed Medical Conditions with Deep Learning-Based Opportunistic CT Imaging. CoRR abs/2409.11686 (2024) - [i6]Justin Xu, Zhihong Chen, Andrew Johnston, Louis Blankemeier, Maya Varma, Jason Hom, William J. Collins, Ankit Modi, Robert Lloyd, Benjamin Hopkins, Curtis P. Langlotz, Jean-Benoit Delbrouck:
Overview of the First Shared Task on Clinical Text Generation: RRG24 and "D$ischarge Me!". CoRR abs/2409.16603 (2024) - 2023
- [i5]Louis Blankemeier, Arjun D. Desai, Juan Manuel Zambrano Chaves, Andrew Wentland, Sally Yao, Eduardo Pontes Reis, Malte E. K. Jensen, Bhanushree Bahl, Khushboo Arora, Bhavik N. Patel, Leon Lenchik, Marc H. Willis, Robert D. Boutin, Akshay S. Chaudhari:
Comp2Comp: Open-Source Body Composition Assessment on Computed Tomography. CoRR abs/2302.06568 (2023) - [i4]Scott L. Fleming, Alejandro Lozano, William J. Haberkorn, Jenelle A. Jindal, Eduardo Pontes Reis, Rahul Thapa, Louis Blankemeier, Julian Z. Genkins, Ethan Steinberg, Ashwin Nayak, Birju S. Patel, Chia-Chun Chiang, Alison Callahan, Zepeng Huo, Sergios Gatidis, Scott J. Adams, Oluseyi Fayanju, Shreya J. Shah, Thomas Savage, Ethan Goh, Akshay S. Chaudhari, Nima Aghaeepour, Christopher D. Sharp, Michael A. Pfeffer, Percy Liang, Jonathan H. Chen, Keith E. Morse, Emma P. Brunskill, Jason A. Fries, Nigam H. Shah:
MedAlign: A Clinician-Generated Dataset for Instruction Following with Electronic Medical Records. CoRR abs/2308.14089 (2023) - [i3]Louis Blankemeier, Sebastien Baur, Wei-Hung Weng, Jake Garrison, Yossi Matias, Shruthi Prabhakara, Diego Ardila, Zaid Nabulsi:
Optimizing Audio Augmentations for Contrastive Learning of Health-Related Acoustic Signals. CoRR abs/2309.05843 (2023) - [i2]Dave Van Veen, Cara Van Uden, Louis Blankemeier, Jean-Benoit Delbrouck, Asad Aali, Christian Bluethgen, Anuj Pareek, Malgorzata Polacin, William Collins, Neera Ahuja, Curtis P. Langlotz, Jason Hom, Sergios Gatidis, John M. Pauly, Akshay S. Chaudhari:
Clinical Text Summarization: Adapting Large Language Models Can Outperform Human Experts. CoRR abs/2309.07430 (2023) - [i1]Joseph Paul Cohen, Louis Blankemeier, Akshay Chaudhari:
Identifying Spurious Correlations using Counterfactual Alignment. CoRR abs/2312.02186 (2023)
Coauthor Index
aka: Akshay S. Chaudhari
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