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Books and Theses
- 2006
[b1]Daniel Dalevi:
Inferring evolution in bacteria using Markov chains and genomic signatures. Chalmers University of Technology, Gothenburg, Sweden, 2006
Journal Articles
- 2010
- [j8]Sean D. Hooper, Daniel Dalevi, Amrita Pati, Konstantinos Mavrommatis
, Natalia Ivanova, Nikos Kyrpides:
Estimating DNA coverage and abundance in metagenomes using a gamma approximation. Bioinform. 26(3): 295-301 (2010) - 2009
- [j7]Erik Kristiansson, Philip Hugenholtz, Daniel Dalevi:
ShotgunFunctionalizeR: an R-package for functional comparison of metagenomes. Bioinform. 25(20): 2737-2738 (2009) - 2008
- [j6]Daniel Dalevi, Niklas Eriksen:
Expected gene-order distances and model selection in bacteria. Bioinform. 24(11): 1332-1338 (2008) - [j5]Victor M. Markowitz, Natalia Ivanova, Ernest Szeto, Krishna Palaniappan, Ken Chu, Daniel Dalevi, I-Min A. Chen, Yuri Grechkin, Inna Dubchak, Iain Anderson, Athanasios Lykidis, Konstantinos Mavrommatis, Philip Hugenholtz, Nikos Kyrpides:
IMG/M: a data management and analysis system for metagenomes. Nucleic Acids Res. 36(Database-Issue): 534-538 (2008) - 2007
- [j4]Marija Cvijovic, Daniel Dalevi, Elizabeth Bilsland, Graham J. L. Kemp, Per Sunnerhagen:
Identification of putative regulatory upstream ORFs in the yeast genome using heuristics and evolutionary conservation. BMC Bioinform. 8 (2007) - [j3]Daniel Dalevi, Todd Z. DeSantis, Jakob Fredslund, Gary L. Andersen, Victor M. Markowitz, Philip Hugenholtz:
Automated group assignment in large phylogenetic trees using GRUNT: GRouping, Ungrouping, Naming Tool. BMC Bioinform. 8 (2007) - 2006
- [j2]Daniel Dalevi, Devdatt P. Dubhashi, Malte Hermansson:
Bayesian classifiers for detecting HGT using fixed and variable order markov models of genomic signatures. Bioinform. 22(5): 517-522 (2006) - 2004
- [j1]Jim Samuelsson, Daniel Dalevi, Fredrik Levander, Thorsteinn S. Rögnvaldsson:
Modular, scriptable and automated analysis tools for high-throughput peptide mass fingerprinting. Bioinform. 20(18): 3628-3635 (2004)
Conference and Workshop Papers
- 2015
- [c3]Daniel Dalevi, Susan Lovick, Helen Mann, Paul D. Metcalfe, Stuart Spencer, Sally Hollis, David Ruau:
Data Science Solution to Event Prediction in Outsourced Clinical Trial Models. MedInfo 2015: 1065 - 2008
- [c2]Daniel Dalevi, Natalia Ivanova, Konstantinos Mavrommatis, Sean D. Hooper, Ernest Szeto, Philip Hugenholtz, Nikos Kyrpides, Victor M. Markowitz:
Annotation of metagenome short reads using proxygenes. ECCB 2008: 7-13 - 2005
- [c1]Daniel Dalevi, Devdatt P. Dubhashi:
The Peres-Shields Order Estimator for Fixed and Variable Length Markov Models with Applications to DNA Sequence Similarity. WABI 2005: 291-302
Coauthor Index
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