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Jamshed Khan
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Journal Articles
- 2024
- [j5]Jason Fan, Jamshed Khan, Noor Pratap Singh
, Giulio Ermanno Pibiri, Rob Patro:
Fulgor: a fast and compact k-mer index for large-scale matching and color queries. Algorithms Mol. Biol. 19(1): 3 (2024) - [j4]Jamshed Khan, Tobias Rubel, Erin K. Molloy, Laxman Dhulipala, Rob Patro:
Fast, parallel, and cache-friendly suffix array construction. Algorithms Mol. Biol. 19(1): 16 (2024) - 2022
- [j3]Jamshed Khan, Tahir Hussain
, Dania Santina
, Nabil Mlaiki
:
Homothetic Symmetries of Static Cylindrically Symmetric Spacetimes - A Rif Tree Approach. Axioms 11(10): 506 (2022) - [j2]Fatemeh Almodaresi
, Jamshed Khan
, Sergey Madaminov, Michael Ferdman, Rob Johnson, Prashant Pandey, Rob Patro
:
An incrementally updatable and scalable system for large-scale sequence search using the Bentley-Saxe transformation. Bioinform. 38(12): 3155-3163 (2022) - 2021
- [j1]Jamshed Khan
, Rob Patro:
Cuttlefish: fast, parallel and low-memory compaction of de Bruijn graphs from large-scale genome collections. Bioinform. 37(Supplement): 177-186 (2021)
Conference and Workshop Papers
- 2023
- [c3]Jason Fan, Jamshed Khan, Giulio Ermanno Pibiri, Rob Patro:
Spectrum Preserving Tilings Enable Sparse and Modular Reference Indexing. RECOMB 2023: 21-40 - [c2]Jamshed Khan
, Tobias Rubel, Laxman Dhulipala, Erin K. Molloy, Rob Patro:
Fast, Parallel, and Cache-Friendly Suffix Array Construction. WABI 2023: 16:1-16:21 - [c1]Jason Fan, Noor Pratap Singh, Jamshed Khan, Giulio Ermanno Pibiri, Rob Patro:
Fulgor: A Fast and Compact {k-mer} Index for Large-Scale Matching and Color Queries. WABI 2023: 18:1-18:21
Coauthor Index
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