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2020 – today
- 2022
[j9]Madalina Ciortan, Matthieu Defrance
:
GNN-based embedding for clustering scRNA-seq data. Bioinform. 38(4): 1037-1044 (2022)- 2021
- [j8]Alexis Hardy, Mélody Matelot, Amandine Touzeau, Christophe Klopp, Céline Lopez-Roques, Sandra Duharcourt, Matthieu Defrance:
DNAModAnnot: a R toolbox for DNA modification filtering and annotation. Bioinform. 37(17): 2738-2740 (2021) - [j7]Madalina Ciortan, Matthieu Defrance:
Contrastive self-supervised clustering of scRNA-seq data. BMC Bioinform. 22(1): 280 (2021)
2010 – 2019
- 2015
- [j6]Alejandra Medina-Rivera, Matthieu Defrance, Olivier Sand, Carl Herrmann, Jaime Abraham Castro-Mondragón, Jeremy Delerce, Sébastien Jaeger, Christophe Blanchet, Pierre Vincens, Christophe Caron, Daniel M. Staines, Bruno Contreras-Moreira, Marie Artufel, Lucie Charbonnier-Khamvongsa, Céline Hernandez, Denis Thieffry, Morgane Thomas-Chollier, Jacques van Helden:
RSAT 2015: Regulatory Sequence Analysis Tools. Nucleic Acids Res. 43(Webserver-Issue): W50-W56 (2015) - 2014
- [j5]Sarah Dedeurwaerder, Matthieu Defrance, Martin Bizet, Emilie Calonne, Gianluca Bontempi, François Fuks:
A comprehensive overview of Infinium HumanMethylation450 data processing. Briefings Bioinform. 15(6): 929-941 (2014) - 2011
- [j4]Morgane Thomas-Chollier, Matthieu Defrance, Alejandra Medina-Rivera, Olivier Sand, Carl Herrmann, Denis Thieffry, Jacques van Helden:
RSAT 2011: regulatory sequence analysis tools. Nucleic Acids Res. 39(Web-Server-Issue): 86-91 (2011)
2000 – 2009
- 2009
- [j3]Matthieu Defrance, Jacques van Helden:
info-gibbs: a motif discovery algorithm that directly optimizes information content during sampling. Bioinform. 25(20): 2715-2722 (2009) - 2008
- [j2]Morgane Thomas-Chollier, Olivier Sand, Jean-Valéry Turatsinze, Rekin's Janky, Matthieu Defrance, Eric Vervisch, Sylvain Brohée, Jacques van Helden:
RSAT: regulatory sequence analysis tools. Nucleic Acids Res. 36(Web-Server-Issue): 119-127 (2008) - 2006
- [b1]Matthieu Defrance:
Algorithmes pour l'analyse de régions régulatrices dans le génome d'eucaryotes supérieurs. Lille University of Science and Technology, France, 2006 - [j1]Matthieu Defrance, Hélène Touzet:
Predicting transcription factor binding sites using local over-representation and comparative genomics. BMC Bioinform. 7: 396 (2006)
Coauthor Index
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