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Santiago Vilar
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2010 – 2019
- 2018
- [j14]Santiago Vilar, Carol Friedman, George Hripcsak:
Detection of drug-drug interactions through data mining studies using clinical sources, scientific literature and social media. Briefings Bioinform. 19(5): 863-877 (2018) - 2017
- [j13]Santiago Vilar, George Hripcsak:
The role of drug profiles as similarity metrics: applications to repurposing, adverse effects detection and drug-drug interactions. Briefings Bioinform. 18(4): 670-681 (2017) - 2016
- [j12]Santiago Vilar, George Hripcsak:
Leveraging 3D chemical similarity, target and phenotypic data in the identification of drug-protein and drug-adverse effect associations. J. Cheminformatics 8(1): 35:1-35:12 (2016) - 2015
- [j11]Serkan Ayvaz, John R. Horn, Oktie Hassanzadeh, Qian Zhu, Johann Stan, Nicholas P. Tatonetti, Santiago Vilar, Mathias Brochhausen, Matthias Samwald, Majid Rastegar-Mojarad, Michel Dumontier, Richard D. Boyce:
Toward a complete dataset of drug-drug interaction information from publicly available sources. J. Biomed. Informatics 55: 206-217 (2015) - 2014
- [j10]Ying Li, Hojjat Salmasian, Santiago Vilar, Herbert S. Chase, Carol Friedman, Ying Wei:
A method for controlling complex confounding effects in the detection of adverse drug reactions using electronic health records. J. Am. Medical Informatics Assoc. 21(2): 308-314 (2014) - [c1]Ying Li, Santiago Vilar, Ying Wei, Carol Friedman:
Combining Heterogeneous Databases to Detect Adverse Drug Reaction. AMIA 2014 - 2013
- [j9]Rave Harpaz, Santiago Vilar, William DuMouchel, Hojjat Salmasian, Krystl Haerian, Nigam H. Shah, Herbert S. Chase, Carol Friedman:
Combing signals from spontaneous reports and electronic health records for detection of adverse drug reactions. J. Am. Medical Informatics Assoc. 20(3): 413-419 (2013) - 2012
- [j8]Santiago Vilar, Rave Harpaz, Eugenio Uriarte, Lourdes Santana, Raul Rabadan, Carol Friedman:
Drug-drug interaction through molecular structure similarity analysis. J. Am. Medical Informatics Assoc. 19(6): 1066-1074 (2012) - [j7]Stefano Costanzi, Santiago Vilar:
In Silico screening for agonists and blockers of the β2 adrenergic receptor: Implications of inactive and activated state structures. J. Comput. Chem. 33(5): 561-572 (2012) - 2011
- [j6]Santiago Vilar, Rave Harpaz, Herbert S. Chase, Stefano Costanzi, Raul Rabadan, Carol Friedman:
Facilitating adverse drug event detection in pharmacovigilance databases using molecular structure similarity: application to rhabdomyolysis. J. Am. Medical Informatics Assoc. 18(Supplement): 73-80 (2011) - [p1]Cristian R. Munteanu, Julián Dorado, Alejandro Pazos Sierra, Francisco J. Prado-Prado, L. G. Pérez-Montoto, Santiago Vilar, Florencio M. Ubeira, Angeles Sánchez-Gonzaléz, Maykel Cruz-Monteagudo, Sonia Arrasate, Nuria Sotomayor, Esther Lete, Aliuska Duardo-Sánchez, Antonio Díaz-López, Grace Patlewicz, Humberto González Díaz:
Markov Entropy Centrality: Chemical, Biological, Crime, and Legislative Networks. Towards an Information Theory of Complex Networks 2011: 199-258 - 2010
- [j5]Santiago Vilar, Joel Karpiak, Stefano Costanzi:
Ligand and structure-based models for the prediction of ligand-receptor affinities and virtual screenings: Development and application to the beta2-adrenergic receptor. J. Comput. Chem. 31(4): 707-720 (2010)
2000 – 2009
- 2008
- [j4]Santiago Vilar, Humberto González Díaz, Lourdes Santana, Eugenio Uriarte:
QSAR model for alignment-free prediction of human breast cancer biomarkers based on electrostatic potentials of protein pseudofolding HP-lattice networks. J. Comput. Chem. 29(16): 2613-2622 (2008) - 2007
- [j3]Santiago Vilar, M. Carmen Villaverde, Fredy Sussman:
Inhibitor docking screened by the modified SAFE_p scoring function: Application to cyclic urea HIV-1 PR inhibitors. J. Comput. Chem. 28(13): 2216-2225 (2007) - 2005
- [j2]Santiago Vilar, Ernesto Estrada, Eugenio Uriarte, Lourdes Santana, Yaquelin Gutierrez:
In Silico Studies toward the Discovery of New Anti-HIV Nucleoside Compounds through the Use of TOPS-MODE and 2D/3D Connectivity Indices. 2. Purine Derivatives. J. Chem. Inf. Model. 45(2): 502-514 (2005) - 2002
- [j1]Ernesto Estrada, Santiago Vilar, Eugenio Uriarte, Yaquelin Gutierrez:
In Silico Studies toward the Discovery of New Anti-HIV Nucleoside Compounds with the Use of TOPS-MODE and 2D/3D Connectivity Indices, 1. Pyrimidyl Derivatives. J. Chem. Inf. Comput. Sci. 42(5): 1194-1203 (2002)
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