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Books and Theses
- 2024
[b1]Joel Graef:
Methoden zur geometrischen Suche in Proteinstruktursammlungen (Methods for Geometric Mining in Protein Structure Collections). University of Hamburg, Germany, 2024
Journal Articles
- 2024
- [j5]Konrad Diedrich
, Christiane Ehrt, Joel Graef, Martin Poppinga, Norbert Ritter, Matthias Rarey:
User-centric design of a 3D search interface for protein-ligand complexes. J. Comput. Aided Mol. Des. 38(1): 23 (2024) - [j4]Joel Graef, Christiane Ehrt, Thorben Reim, Matthias Rarey:
Database-Driven Identification of Structurally Similar Protein-Protein Interfaces. J. Chem. Inf. Model. 64(8): 3332-3349 (2024) - 2023
- [j3]Joel Graef, Christiane Ehrt, Matthias Rarey:
Binding Site Detection Remastered: Enabling Fast, Robust, and Reliable Binding Site Detection and Descriptor Calculation with DoGSite3. J. Chem. Inf. Model. 63(10): 3128-3137 (2023) - 2022
- [j2]Katrin Schöning-Stierand, Konrad Diedrich, Christiane Ehrt, Florian Flachsenberg, Joel Graef, Jochen Sieg, Patrick Penner, Martin Poppinga, Annett Ungethüm, Matthias Rarey:
ProteinsPlus: a comprehensive collection of web-based molecular modeling tools. Nucleic Acids Res. 50(W1): 611-615 (2022) - 2021
- [j1]Konrad Diedrich, Joel Graef, Katrin Schöning-Stierand, Matthias Rarey:
GeoMine: interactive pattern mining of protein-ligand interfaces in the Protein Data Bank. Bioinform. 37(3): 424-425 (2021)
Conference and Workshop Papers
- 2023
- [c1]Martin Poppinga, Joel Graef, Konrad Diedrich, Matthias Rarey, Norbert Ritter:
Database and Workflow Optimizations for Spatial-Geometric Queries in GeoMine. LWDA 2023: 86-97
Coauthor Index
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