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Seyedeh Shaghayegh Sadeghi

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2024
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  - journals/bmcbi/SadeghiBFLN24
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Seyedeh Shaghayegh Sadeghi, Alan Bui, Ali Forooghi, Jianguo Lu, Alioune Ngom:
Can large language models understand molecules? BMC Bioinform. 25(1): 225 (2024)
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  - journals/corr/abs-2402-00024
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Seyedeh Shaghayegh Sadeghi, Alan Bui, Ali Forooghi, Jianguo Lu, Alioune Ngom:
Comparative Analysis of LLaMA and ChatGPT Embeddings for Molecule Embedding. CoRR abs/2402.00024 (2024)
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  - journals/corr/abs-2407-12886
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Ali Forooghi, Seyedeh Shaghayegh Sadeghi, Jianguo Lu:
Whitening Not Recommended for Classification Tasks in LLMs. CoRR abs/2407.12886 (2024)
2022
[j2]
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  - journals/bioinformatics/SadeghiLN22
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Seyedeh Shaghayegh Sadeghi, Jianguo Lu, Alioune Ngom:
A network-based drug repurposing method via non-negative matrix factorization. Bioinform. 38(5): 1369-1377 (2022)
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  - conf/cibcb/FilipSNR22
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Alexandru Filip, Seyedeh Shaghayegh Sadeghi, Alioune Ngom, Luis Rueda:
DeePSLiM: A Deep Learning Approach to Identify Predictive Short-linear Motifs for Protein Sequence Classification. CIBCB 2022: 1-8
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Seyedeh Shaghayegh Sadeghi, Alioune Ngom:
DDIPred: Graph Convolutional Network-Based Drug-drug Interactions Prediction Using Drug Chemical Structure Embedding. CIBCB 2022: 1-6
2021
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  - journals/tcbb/SadeghiK21
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Seyedeh Shaghayegh Sadeghi, Mohammad Reza Keyvanpour:
An Analytical Review of Computational Drug Repurposing. IEEE ACM Trans. Comput. Biol. Bioinform. 18(2): 472-488 (2021)

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