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She Zhang
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Journal Articles
- 2024
- [j6]Neha Vithani, She Zhang, Jeffrey P. Thompson, Lara A. Patel, Alex Demidov, Junchao Xia, Alexander Balaeff, Ahmet Mentes, Yelena A. Arnautova, Anna Kohlmann, J. David Lawson, Anthony Nicholls, A. Geoffrey Skillman, David N. LeBard:
Exploration of Cryptic Pockets Using Enhanced Sampling Along Normal Modes: A Case Study of KRAS G12D. J. Chem. Inf. Model. 64(21): 8258-8273 (2024) - 2022
- [j5]She Zhang, Jeffrey P. Thompson, Junchao Xia, Anthony T. Bogetti, Forrest York, A. Geoffrey Skillman, Lillian T. Chong, David N. LeBard:
Mechanistic Insights into Passive Membrane Permeability of Drug-like Molecules from a Weighted Ensemble of Trajectories. J. Chem. Inf. Model. 62(8): 1891-1904 (2022) - [j4]Omer Acar, She Zhang, Ivet Bahar, Anne-Ruxandra Carvunis:
Elastic network modeling of cellular networks unveils sensor and effector genes that control information flow. PLoS Comput. Biol. 18(5) (2022) - 2021
- [j3]She Zhang, James Krieger, Yan Zhang, Cihan Kaya, Burak T. Kaynak, Karolina Mikulska-Ruminska, Pemra Doruker, Hongchun Li, Ivet Bahar:
ProDy 2.0: increased scale and scope after 10 years of protein dynamics modelling with Python. Bioinform. 37(20): 3657-3659 (2021) - [j2]Burak T. Kaynak, She Zhang, Ivet Bahar, Pemra Doruker:
ClustENMD: efficient sampling of biomolecular conformational space at atomic resolution. Bioinform. 37(21): 3956-3958 (2021) - 2019
- [j1]Karolina Mikulska-Ruminska, Indira Shrivastava, James Krieger, She Zhang, Hongchun Li, Hülya Bayir, Sally E. Wenzel, Andrew P. Vandemark, Valerian E. Kagan, Ivet Bahar:
Characterization of Differential Dynamics, Specificity, and Allostery of Lipoxygenase Family Members. J. Chem. Inf. Model. 59(5): 2496-2508 (2019)
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