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Journal Articles
- 2024
[j6]Philippe Weitz
, Masi Valkonen, Leslie Solorzano, Circe Carr, Kimmo Kartasalo, Constance Boissin, Sonja Koivukoski, Aino Kuusela, Dusan Rasic, Yanbo Feng, Sandra Kristiane Sinius Pouplier, Abhinav Sharma, Kajsa Ledesma Eriksson, Stephanie Robertson, Christian Marzahl, Chandler D. Gatenbee, Alexander R. A. Anderson, Marek Wodzinski, Artur Jurgas, Niccolò Marini, Manfredo Atzori, Henning Müller, Daniel Budelmann, Nick Weiss, Stefan Heldmann, Johannes Lotz, Jelmer M. Wolterink, Bruno De Santi, Abhijeet Patil, Amit Sethi, Satoshi Kondo, Satoshi Kasai, Kousuke Hirasawa, Mahtab Farrokh, Neeraj Kumar, Russell Greiner, Leena Latonen, Anne-Vibeke Laenkholm, Johan Hartman, Pekka Ruusuvuori, Mattias Rantalainen:
The ACROBAT 2022 challenge: Automatic registration of breast cancer tissue. Medical Image Anal. 97: 103257 (2024)- 2022
- [j5]Sandhya Prabhakaran, Chandler Gatenbee, Mark Robertson-Tessi, Jeffrey West, Amer A. Beg, Jhanelle Gray, Scott Antonia, Robert A. Gatenby, Alexander R. A. Anderson:
Mistic: An open-source multiplexed image t-SNE viewer. Patterns 3(7): 100523 (2022) - [j4]Sandhya Prabhakaran, Chandler Gatenbee, Alexander R. A. Anderson:
Developing tools for analyzing and viewing multiplexed images. Patterns 3(7): 100549 (2022) - 2020
- [j3]Rafael R. Bravo, Etienne Baratchart, Jeffrey West, Ryan O. Schenck, Anna K. Miller, Jill Gallaher, Chandler Gatenbee, David Basanta, Mark Robertson-Tessi, Alexander R. A. Anderson:
Hybrid Automata Library: A flexible platform for hybrid modeling with real-time visualization. PLoS Comput. Biol. 16(3) (2020) - 2019
- [j2]Ryan O. Schenck, Eszter Lakatos, Chandler Gatenbee, Trevor A. Graham, Alexander R. A. Anderson:
NeoPredPipe: high-throughput neoantigen prediction and recognition potential pipeline. BMC Bioinform. 20(1): 264:1-264:6 (2019) - [j1]Chandler Gatenbee, Ryan O. Schenck, Rafael R. Bravo, Alexander R. A. Anderson:
EvoFreq: visualization of the Evolutionary Frequencies of sequence and model data. BMC Bioinform. 20(1): 710 (2019)
Informal and Other Publications
- 2023
- [i1]Philippe Weitz, Masi Valkonen, Leslie Solorzano, Circe Carr, Kimmo Kartasalo, Constance Boissin, Sonja Koivukoski, Aino Kuusela, Dusan Rasic, Yanbo Feng, Sandra Kristiane Sinius Pouplier, Abhinav Sharma, Kajsa Ledesma Eriksson, Stephanie Robertson, Christian Marzahl, Chandler D. Gatenbee, Alexander R. A. Anderson, Marek Wodzinski, Artur Jurgas, Niccolò Marini, Manfredo Atzori, Henning Müller, Daniel Budelmann, Nick Weiss, Stefan Heldmann, Johannes Lotz, Jelmer M. Wolterink, Bruno De Santi, Abhijeet Patil, Amit Sethi, Satoshi Kondo, Satoshi Kasai, Kousuke Hirasawa, Mahtab Farrokh, Neeraj Kumar, Russell Greiner, Leena Latonen, Anne-Vibeke Laenkholm, Johan Hartman, Pekka Ruusuvuori, Mattias Rantalainen:
The ACROBAT 2022 Challenge: Automatic Registration Of Breast Cancer Tissue. CoRR abs/2305.18033 (2023)
Coauthor Index
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