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Pieter C. Dorrestein
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2020 – today
- 2023
- [j8]Tiago Cabral Borelli, Gabriel Santos Arini, Luís G. P. Feitosa, Pieter C. Dorrestein, Norberto Peporine Lopes, Ricardo Roberto da Silva:
Improving annotation propagation on molecular networks through random walks: introducing ChemWalker. Bioinform. 39(3) (2023) - [j7]Hyun Woo Kim, Chen Zhang, Raphael Reher, Mingxun Wang, Kelsey L. Alexander, Louis-Félix Nothias, Yoo Kyong Han, Hyeji Shin, Ki Yong Lee, Kyu Hyeong Lee, Myeong Ji Kim, Pieter C. Dorrestein, William H. Gerwick, Garrison W. Cottrell:
DeepSAT: Learning Molecular Structures from Nuclear Magnetic Resonance Data. J. Cheminformatics 15(1): 71 (2023) - 2020
- [j6]Marcus Ludwig, Louis-Félix Nothias, Kai Dührkop, Irina Koester, Markus Fleischauer, Martin A. Hoffmann, Daniel Petras, Fernando Vargas, Mustafa Morsy, Lihini Aluwihare, Pieter C. Dorrestein, Sebastian Böcker:
Database-independent molecular formula annotation using Gibbs sampling through ZODIAC. Nat. Mach. Intell. 2(10): 629-641 (2020) - [j5]Marcus Ludwig, Louis-Félix Nothias, Kai Dührkop, Irina Koester, Markus Fleischauer, Martin A. Hoffmann, Daniel Petras, Fernando Vargas, Mustafa Morsy, Lihini Aluwihare, Pieter C. Dorrestein, Sebastian Böcker:
Publisher Correction: Database-independent molecular formula annotation using Gibbs sampling through ZODIAC. Nat. Mach. Intell. 2(11): 727 (2020)
2010 – 2019
- 2019
- [j4]Joanne K. Liu, Colton J. Lloyd, Mahmoud M. Al-Bassam, Ali Ebrahim, Ji-Nu Kim, Connor A. Olson, Alexander Aksenov, Pieter C. Dorrestein, Karsten Zengler:
Predicting proteome allocation, overflow metabolism, and metal requirements in a model acetogen. PLoS Comput. Biol. 15(3) (2019) - [c3]Bahar Behsaz, Hosein Mohimani, Alexey A. Gurevich, Andrey D. Prjibelski, Mark F. Fisher, Larry Smarr, Pieter C. Dorrestein, Joshua S. Mylne, Pavel A. Pevzner:
De Novo Peptide Sequencing Reveals a Vast Cyclopeptidome in Human Gut and Other Environments. RECOMB 2019: 289-291 - 2018
- [j3]Ricardo Roberto da Silva, Mingxun Wang, Louis-Félix Nothias, Justin J. J. van der Hooft, Andrés Mauricio Caraballo-Rodríguez, Evan Fox, Marcy J. Balunas, Jonathan L. Klassen, Norberto Peporine Lopes, Pieter C. Dorrestein:
Propagating annotations of molecular networks using in silico fragmentation. PLoS Comput. Biol. 14(4) (2018) - 2017
- [i1]Theodore Alexandrov, Sebastian Böcker, Pieter C. Dorrestein, Emma Schymanski:
Computational Metabolomics: Identification, Interpretation, Imaging (Dagstuhl Seminar 17491). Dagstuhl Reports 7(12): 1-17 (2017) - 2014
- [j2]Marnix H. Medema, Yared Paalvast, Don D. Nguyen, Alexey Melnik, Pieter C. Dorrestein, Eriko Takano, Rainer Breitling:
Pep2Path: Automated Mass Spectrometry-Guided Genome Mining of Peptidic Natural Products. PLoS Comput. Biol. 10(9) (2014) - 2011
- [j1]Hosein Mohimani, Wei-Ting Liu, Yu-Liang Yang, Susana P. Gaudêncio, William Fenical, Pieter C. Dorrestein, Pavel A. Pevzner:
Multiplex De Novo Sequencing of Peptide Antibiotics. J. Comput. Biol. 18(11): 1371-1381 (2011) - [c2]Hosein Mohimani, Wei-Ting Liu, Yu-Liang Yang, Susana P. Gaudêncio, William Fenical, Pieter C. Dorrestein, Pavel A. Pevzner:
Multiplex De Novo Sequencing of Peptide Antibiotics. RECOMB 2011: 267-281
2000 – 2009
- 2008
- [c1]Nuno Bandeira, Julio Ng, Dario Meluzzi, Roger G. Linington, Pieter C. Dorrestein, Pavel A. Pevzner:
De Novo Sequencing of Nonribosomal Peptides. RECOMB 2008: 181-195
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