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ORCIDCarlos H. M. Rodrigues
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- affiliation: University of Melbourne, Bio21 Institute, Department of Biochemistry and Molecular Biology, Australia
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Journal Articles
- 2024
[j14]Raghad Al-Jarf, Carlos H. M. Rodrigues, Yoochan Myung, Douglas E. V. Pires, David B. Ascher:
piscesCSM: prediction of anticancer synergistic drug combinations. J. Cheminformatics 16(1): 81 (2024)- 2023
- [j13]Nathan P. Williams, Carlos H. M. Rodrigues, Jia Truong, David B. Ascher, Jessica K. Holien
:
DockNet: high-throughput protein-protein interface contact prediction. Bioinform. 39(1) (2023) - [j12]Yunzhuo Zhou, Qisheng Pan, Douglas E. V. Pires, Carlos H. M. Rodrigues, David B. Ascher:
DDMut: predicting effects of mutations on protein stability using deep learning. Nucleic Acids Res. 51(W1): 122-128 (2023) - 2022
- [j11]Carlos H. M. Rodrigues, Douglas E. V. Pires, Tom L. Blundell, David B. Ascher:
Structural landscapes of PPI interfaces. Briefings Bioinform. 23(4) (2022) - [j10]Carlos H. M. Rodrigues, David B. Ascher:
CSM-Potential: mapping protein interactions and biological ligands in 3D space using geometric deep learning. Nucleic Acids Res. 50(W1): 204-209 (2022) - 2021
- [j9]Carlos H. M. Rodrigues, Douglas E. V. Pires, David B. Ascher:
pdCSM-PPI: Using Graph-Based Signatures to Identify Protein-Protein Interaction Inhibitors. J. Chem. Inf. Model. 61(11): 5438-5445 (2021) - [j8]Carlos H. M. Rodrigues, Douglas E. V. Pires, David B. Ascher:
mmCSM-PPI: predicting the effects of multiple point mutations on protein-protein interactions. Nucleic Acids Res. 49(Webserver-Issue): 417-424 (2021) - [j7]Michael Silk, Douglas E. V. Pires, Carlos H. M. Rodrigues, Elston N. D'souza, Moshe Olshansky, Natalie Thorne, David B. Ascher:
MTR3D: identifying regions within protein tertiary structures under purifying selection. Nucleic Acids Res. 49(Webserver-Issue): 438-445 (2021) - 2020
- [j6]Yoochan Myung, Carlos H. M. Rodrigues, David B. Ascher, Douglas E. V. Pires:
mCSM-AB2: guiding rational antibody design using graph-based signatures. Bioinform. 36(5): 1453-1459 (2020) - [j5]Douglas E. V. Pires, Wandré N. P. Veloso, Yoochan Myung, Carlos H. M. Rodrigues, Michael Silk, Pâmela M. Rezende, Francislon Silva, Joicymara S. Xavier, João P. L. Velloso, Carlos Henrique da Silveira, David B. Ascher:
EasyVS: a user-friendly web-based tool for molecule library selection and structure-based virtual screening. Bioinform. 36(14): 4200-4202 (2020) - [j4]Douglas E. V. Pires, Carlos H. M. Rodrigues, David B. Ascher:
mCSM-membrane: predicting the effects of mutations on transmembrane proteins. Nucleic Acids Res. 48(Webserver-Issue): W147-W153 (2020) - 2019
- [j3]Carlos H. M. Rodrigues, Yoochan Myung, Douglas E. V. Pires, David B. Ascher:
mCSM-PPI2: predicting the effects of mutations on protein-protein interactions. Nucleic Acids Res. 47(Webserver-Issue): W338-W344 (2019) - 2018
- [j2]Carlos H. M. Rodrigues, David B. Ascher, Douglas E. V. Pires:
Kinact: a computational approach for predicting activating missense mutations in protein kinases. Nucleic Acids Res. 46(Webserver-Issue): W127-W132 (2018) - [j1]Carlos H. M. Rodrigues, Douglas E. V. Pires, David B. Ascher:
DynaMut: predicting the impact of mutations on protein conformation, flexibility and stability. Nucleic Acids Res. 46(Webserver-Issue): W350-W355 (2018)
Parts in Books or Collections
- 2021
- [p1]Edward Airey, Stephanie Portelli, Joicymara S. Xavier, Yoochan Myung, Michael Silk, Malancha Karmakar, João P. L. Velloso, Carlos H. M. Rodrigues, Hardik H. Parate, Anjali Garg, Raghad Al-Jarf, Lucy Barr, Juliana A. Geraldo, Pâmela M. Rezende, Douglas E. V. Pires, David B. Ascher:
Identifying Genotype-Phenotype Correlations via Integrative Mutation Analysis. Artificial Neural Networks, 3rd Edition 2021: 1-32
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