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2020 – today
- 2024
[j13]Alina Peluso
, Ioana Danciu, Hong-Jun Yoon, Jamaludin Mohd-Yusof, Tanmoy Bhattacharya, Adam Spannaus, Noah Schaefferkoetter, Eric B. Durbin, Xiao-Cheng Wu, Antoinette Stroup, Jennifer A. Doherty, Stephen M. Schwartz, Charles Wiggins, Linda Coyle, Lynne Penberthy, Georgia D. Tourassi, Shang Gao:
Deep learning uncertainty quantification for clinical text classification. J. Biomed. Informatics 149: 104576 (2024)- [j12]Hong-Jun Yoon, Hilda B. Klasky, Andrew E. Blanchard, James Blair Christian, Eric B. Durbin, Xiao-Cheng Wu, Antoinette Stroup, Jennifer A. Doherty, Linda Coyle, Lynne Penberthy, Georgia D. Tourassi:
Development of message passing-based graph convolutional networks for classifying cancer pathology reports. BMC Medical Informatics Decis. Mak. 24-S(5): 262 (2024) - 2022
- [j11]Kevin De Angeli, Shang Gao, Ioana Danciu, Eric B. Durbin, Xiao-Cheng Wu, Antoinette Stroup, Jennifer A. Doherty, Stephen M. Schwartz, Charles Wiggins, Mark Damesyn, Linda Coyle, Lynne Penberthy, Georgia D. Tourassi, Hong-Jun Yoon:
Class imbalance in out-of-distribution datasets: Improving the robustness of the TextCNN for the classification of rare cancer types. J. Biomed. Informatics 125: 103957 (2022) - [j10]Andrew E. Blanchard, Shang Gao, Hong-Jun Yoon, James Blair Christian, Eric B. Durbin, Xiao-Cheng Wu, Antoinette Stroup, Jennifer A. Doherty, Stephen M. Schwartz, Charles Wiggins, Linda Coyle, Lynne Penberthy, Georgia D. Tourassi:
A Keyword-Enhanced Approach to Handle Class Imbalance in Clinical Text Classification. IEEE J. Biomed. Health Informatics 26(6): 2796-2803 (2022) - 2021
- [j9]Kevin De Angeli, Shang Gao, Mohammed M. Alawad, Hong-Jun Yoon, Noah Schaefferkoetter, Xiao-Cheng Wu, Eric B. Durbin, Jennifer A. Doherty, Antoinette Stroup, Linda Coyle, Lynne Penberthy, Georgia D. Tourassi:
Deep active learning for classifying cancer pathology reports. BMC Bioinform. 22(1): 113 (2021) - [j8]Mohammed M. Alawad, Hong-Jun Yoon, Shang Gao, Brent J. Mumphrey, Xiao-Cheng Wu, Eric B. Durbin, Jong Cheol Jeong, Isaac Hands, David Rust, Linda Coyle, Lynne Penberthy, Georgia D. Tourassi:
Privacy-Preserving Deep Learning NLP Models for Cancer Registries. IEEE Trans. Emerg. Top. Comput. 9(3): 1219-1230 (2021) - [j7]Shang Gao, Mohammed M. Alawad, M. Todd Young, John Gounley, Noah Schaefferkoetter, Hong-Jun Yoon, Xiao-Cheng Wu, Eric B. Durbin, Jennifer A. Doherty, Antoinette Stroup, Linda Coyle, Georgia D. Tourassi:
Limitations of Transformers on Clinical Text Classification. IEEE J. Biomed. Health Informatics 25(9): 3596-3607 (2021) - [i1]Mohammed M. Alawad, Shang Gao, Mayanka Chandra Shekar, S. M. Shamimul Hasan, James Blair Christian, Xiao-Cheng Wu, Eric B. Durbin, Jennifer A. Doherty, Antoinette Stroup, Linda Coyle, Lynne Penberthy, Georgia D. Tourassi:
Integration of Domain Knowledge using Medical Knowledge Graph Deep Learning for Cancer Phenotyping. CoRR abs/2101.01337 (2021) - 2020
- [j6]Mohammed M. Alawad, Shang Gao, John X. Qiu, Hong-Jun Yoon, James Blair Christian, Lynne Penberthy, Brent J. Mumphrey, Xiao-Cheng Wu, Linda Coyle, Georgia D. Tourassi:
Automatic extraction of cancer registry reportable information from free-text pathology reports using multitask convolutional neural networks. J. Am. Medical Informatics Assoc. 27(1): 89-98 (2020) - [j5]Hong-Jun Yoon, Hilda B. Klasky, John P. Gounley, Mohammed M. Alawad, Shang Gao, Eric B. Durbin, Xiao-Cheng Wu, Antoinette Stroup, Jennifer A. Doherty, Linda Coyle, Lynne Penberthy, James Blair Christian, Georgia D. Tourassi:
Accelerated training of bootstrap aggregation-based deep information extraction systems from cancer pathology reports. J. Biomed. Informatics 110: 103564 (2020) - [j4]S. M. Shamimul Hasan, Donna R. Rivera, Xiao-Cheng Wu, Eric B. Durbin, James Blair Christian, Georgia D. Tourassi:
Knowledge Graph-Enabled Cancer Data Analytics. IEEE J. Biomed. Health Informatics 24(7): 1952-1967 (2020) - [c5]Hong-Jun Yoon, Hilda B. Klasky, Eric B. Durbin, Xiao-Cheng Wu, Antoinette Stroup, Jennifer A. Doherty, Linda Coyle, Lynne Penberthy, Christopher B. Stanley, James Blair Christian, Georgia D. Tourassi:
Privacy-Preserving Knowledge Transfer with Bootstrap Aggregation of Teacher Ensembles. Poly/DMAH@VLDB 2020: 87-99
2010 – 2019
- 2019
- [j3]Shang Gao, John X. Qiu, Mohammed M. Alawad, Jacob D. Hinkle, Noah Schaefferkoetter, Hong-Jun Yoon, James Blair Christian, Paul A. Fearn, Lynne Penberthy, Xiao-Cheng Wu, Linda Coyle, Georgia D. Tourassi, Arvind Ramanathan:
Classifying cancer pathology reports with hierarchical self-attention networks. Artif. Intell. Medicine 101 (2019) - [c4]Mohammed M. Alawad, Shang Gao, John X. Qiu, Noah Schaefferkoetter, Jacob D. Hinkle, Hong-Jun Yoon, James Blair Christian, Xiao-Cheng Wu, Eric B. Durbin, Jong Cheol Jeong, Isaac Hands, David Rust, Georgia D. Tourassi:
Deep Transfer Learning Across Cancer Registries for Information Extraction from Pathology Reports. BHI 2019: 1-4 - [c3]S. M. Shamimul Hasan, Donna R. Rivera, Xiao-Cheng Wu, James Blair Christian, Georgia D. Tourassi:
A Knowledge Graph Approach for the Secondary Use of Cancer Registry Data. BHI 2019: 1-4 - [c2]John X. Qiu, Shang Gao, Mohammed M. Alawad, Noah Schaefferkoetter, Folami Alamudun, Hong-Jun Yoon, Xiao-Cheng Wu, Georgia D. Tourassi:
Semi-Supervised Information Extraction for Cancer Pathology Reports. BHI 2019: 1-4 - [c1]Mohammed M. Alawad, Shang Gao, Xiao-Cheng Wu, Eric B. Durbin, Linda Coyle, Lynne Penberthy, Georgia D. Tourassi:
Adversarial Training for Privacy-Preserving Deep Learning Model Distribution. IEEE BigData 2019: 5705-5710 - 2018
- [j2]Nicolas W. Hengartner, Leticia Cuellar, Xiao-Cheng Wu, Georgia D. Tourassi, John X. Qiu, James Blair Christian, Tanmoy Bhattacharya:
CAT: computer aided triage improving upon the Bayes risk through ε-refusal triage rules. BMC Bioinform. 19-S(18): 3-8 (2018) - [j1]John X. Qiu, Hong-Jun Yoon, Kshitij Srivastava, Thomas P. Watson, James Blair Christian, Arvind Ramanathan, Xiao-Cheng Wu, Paul A. Fearn, Georgia D. Tourassi:
Scalable deep text comprehension for Cancer surveillance on high-performance computing. BMC Bioinform. 19-S(18): 99-110 (2018)
Coauthor Index
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