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Journal Articles
- 2024
[j9]Lantian Yao
, Peilin Xie, Jiahui Guan, Chia-Ru Chung, Yixian Huang, Yuxuan Pang, Huacong Wu, Ying-Chih Chiang, Tzong-Yi Lee:
CapsEnhancer: An Effective Computational Framework for Identifying Enhancers Based on Chaos Game Representation and Capsule Network. J. Chem. Inf. Model. 64(14): 5725-5736 (2024)- 2023
- [j8]Mengqi Luo, Shangfu Li, Yuxuan Pang, Lantian Yao, Renfei Ma, Hsi-Yuan Huang, Hsien-Da Huang, Tzong-Yi Lee:
Extraction of microRNA-target interaction sentences from biomedical literature by deep learning approach. Briefings Bioinform. 24(1) (2023) - [j7]Zhuo Wang, Yuxuan Pang, Chia-Ru Chung, Hsin-Yao Wang, Haiyan Cui, Ying-Chih Chiang, Jorng-Tzong Horng, Jang-Jih Lu, Tzong-Yi Lee:
A risk assessment framework for multidrug-resistant Staphylococcus aureus using machine learning and mass spectrometry technology. Briefings Bioinform. 24(6) (2023) - 2022
- [j6]Yuxuan Pang, Lantian Yao, Jingyi Xu, Zhuo Wang, Tzong-Yi Lee:
Integrating transformer and imbalanced multi-label learning to identify antimicrobial peptides and their functional activities. Bioinform. 38(24): 5368-5374 (2022) - [j5]Jhih-Hua Jhong, Lantian Yao, Yuxuan Pang, Zhongyan Li, Chia-Ru Chung, Rulan Wang, Shangfu Li, Wenshuo Li, Mengqi Luo, Renfei Ma, Yuqi Huang, Xiaoning Zhu, Jiahong Zhang, Hexiang Feng, Qifan Cheng, Chunxuan Wang, Kun Xi, Li-Ching Wu, Tzu-Hao Chang, Jorng-Tzong Horng, Lizhe Zhu, Ying-Chih Chiang, Zhuo Wang, Tzong-Yi Lee:
dbAMP 2.0: updated resource for antimicrobial peptides with an enhanced scanning method for genomic and proteomic data. Nucleic Acids Res. 50(D1): 460-470 (2022) - [j4]Zhongyan Li, Shangfu Li, Mengqi Luo, Jhih-Hua Jhong, Wenshuo Li, Lantian Yao, Yuxuan Pang, Zhuo Wang, Rulan Wang, Renfei Ma, Jinhan Yu, Yuqi Huang, Xiaoning Zhu, Qifan Cheng, Hexiang Feng, Jiahong Zhang, Chunxuan Wang, Justin Bo-Kai Hsu, Wen-Chi Chang, Feng-Xiang Wei, Hsien-Da Huang, Tzong-Yi Lee:
dbPTM in 2022: an updated database for exploring regulatory networks and functional associations of protein post-translational modifications. Nucleic Acids Res. 50(D1): 471-479 (2022) - 2021
- [j3]Yuxuan Pang, Zhuo Wang, Jhih-Hua Jhong, Tzong-Yi Lee:
Identifying anti-coronavirus peptides by incorporating different negative datasets and imbalanced learning strategies. Briefings Bioinform. 22(2): 1085-1095 (2021) - [j2]Yuxuan Pang, Lantian Yao, Jhih-Hua Jhong, Zhuo Wang, Tzong-Yi Lee:
AVPIden: a new scheme for identification and functional prediction of antiviral peptides based on machine learning approaches. Briefings Bioinform. 22(6) (2021) - [j1]Zhongyan Li, Siyu Chen, Jhih-Hua Jhong, Yuxuan Pang, Kai-Yao Huang, Shangfu Li, Tzong-Yi Lee:
UbiNet 2.0: a verified, classified, annotated and updated database of E3 ubiquitin ligase-substrate interactions. Database J. Biol. Databases Curation 2021 (2021)
Conference and Workshop Papers
- 2019
- [c1]Yunheng Wu, Yuxuan Pang, Peng Cao:
A 3D Multi-scale Virtual Adversarial Network for False Positive Reduction in Pulmonary Nodule Detection. ICIAI 2019: 193-197
Informal and Other Publications
- 2018
- [i1]Meng Huang, Yuxuan Pang, Zhiqiang Xu:
Improved bounds for the RIP of Subsampled Circulant matrices. CoRR abs/1808.07333 (2018)
Coauthor Index
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