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ORCIDYana A. Sharapova
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Journal Articles
- 2022
[j7]Yana A. Sharapova
, Dmitry A. Suplatov:
Loop 422-437 in NanA from Streptococcus pneumoniae plays the role of an active site lid and is associated with allosteric regulation. Comput. Biol. Medicine 144: 105290 (2022)- 2021
- [j6]Dmitry A. Suplatov, Maksim V. Shegay, Yana A. Sharapova, Ivan V. Timokhin, Nina Popova, Vladimir V. Voevodin, Vytas K. Svedas:
Co-designing HPC-systems by computing capabilities and management flexibility to accommodate bioinformatic workflows at different complexity levels. J. Supercomput. 77(11): 12382-12398 (2021) - 2020
- [j5]Dmitry A. Suplatov, Yana A. Sharapova, Vytas K. Svedas:
EasyAmber: A comprehensive toolbox to automate the molecular dynamics simulation of proteins. J. Bioinform. Comput. Biol. 18(6): 2040011:1-2040011:18 (2020) - [j4]Dmitry A. Suplatov, Yana A. Sharapova, Elizaveta Geraseva, Vytas K. Svedas:
Zebra2: advanced and easy-to-use web-server for bioinformatic analysis of subfamily-specific and conserved positions in diverse protein superfamilies. Nucleic Acids Res. 48(Webserver-Issue): W65-W71 (2020) - 2019
- [j3]Dmitry A. Suplatov, Daria Timonina, Yana A. Sharapova, Vytas K. Svedas:
Yosshi: a web-server for disulfide engineering by bioinformatic analysis of diverse protein families. Nucleic Acids Res. 47(Webserver-Issue): W308-W314 (2019) - 2018
- [j2]Dmitry A. Suplatov, Yana A. Sharapova, Daria Timonina, Kirill E. Kopylov, Vytas K. Svedas:
The visualCMAT: A web-server to select and interpret correlated mutations/co-evolving residues in protein families. J. Bioinform. Comput. Biol. 16(2): 1840005:1-1840005:15 (2018) - [j1]Yana A. Sharapova, Dmitry A. Suplatov, Vytas K. Svedas:
Simulating the Long-timescale Structural Behavior of Bacterial and Influenza Neuraminidases with Different HPC Resources. Supercomput. Front. Innov. 5(3): 30-33 (2018)
Conference and Workshop Papers
- 2019
- [c1]Dmitry A. Suplatov, Yana A. Sharapova, Maksim V. Shegay, Nina N. Popova, Kateryna Fesko, Vladimir V. Voevodin, Vytas K. Svedas:
High-Performance Hybrid Computing for Bioinformatic Analysis of Protein Superfamilies. RuSCDays 2019: 249-264
Coauthor Index
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