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ORCIDAbbas Khan
This is just a disambiguation page, and is not intended to be the bibliography of an actual person. Any publication listed on this page has not been assigned to an actual author yet. If you know the true author of one of the publications listed below, you are welcome to contact us.
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2020 – today
- 2024
[j33]Muhammad Shahab, Muhammad Waleed Iqbal
, Abbas Ahmad, Fahad M. Alshabrmi, Dong-Qing Wei, Abbas Khan, Guojun Zheng:
Immunoinformatics-driven In silico vaccine design for Nipah virus (NPV): Integrating machine learning and computational epitope prediction. Comput. Biol. Medicine 170: 108056 (2024)- [c11]Abbas Khan, Mustaqeem Khan, Wail Gueaieb, Abdulmotaleb El-Saddik, Guilia De Masi, Fakhri Karray:
SpotCrack: Leveraging a Lightweight Framework for Crack Segmentation in Infrastructure. ICCE 2024: 1-5 - [c10]Mustaqeem, Muhammad Saad, Abbas Khan, Wail Gueaieb, Abdulmotaleb El-Saddik, Giulia De Masi, Fakhri Karray:
Action Knowledge Graph for Violence Detection Using Audiovisual Features. ICCE 2024: 1-5 - [c9]Abbas Khan, Muhammad Asad, Martin Benning, Caroline H. Roney, Gregory G. Slabaugh:
Crop and Couple: Cardiac Image Segmentation Using Interlinked Specialist Networks. ISBI 2024: 1-5 - [c8]Abbas Khan, Mustaqeem Khan, Wail Gueaieb, Abdulmotaleb El-Saddik, Giulia De Masi, Fakhri Karray:
CamoFocus: Enhancing Camouflage Object Detection with Split-Feature Focal Modulation and Context Refinement. WACV 2024: 1423-1432 - [i5]Abbas Khan, Muhammad Asad, Martin Benning, Caroline H. Roney, Gregory G. Slabaugh:
Crop and Couple: cardiac image segmentation using interlinked specialist networks. CoRR abs/2402.09156 (2024) - [i4]Omnia Alwazzan, Abbas Khan, Ioannis Patras, Gregory G. Slabaugh:
MOAB: Multi-Modal Outer Arithmetic Block For Fusion Of Histopathological Images And Genetic Data For Brain Tumor Grading. CoRR abs/2403.06349 (2024) - [i3]Abbas Khan, Muhammad Asad, Martin Benning, Caroline H. Roney, Gregory G. Slabaugh:
Multi-view Cardiac Image Segmentation via Trans-Dimensional Priors. CoRR abs/2404.16708 (2024) - [i2]Abbas Khan, Muhammad Asad, Martin Benning, Caroline H. Roney, Gregory G. Slabaugh:
Convolution and Attention-Free Mamba-based Cardiac Image Segmentation. CoRR abs/2406.05786 (2024) - 2023
- [j32]Asma Sindhoo Nangraj, Saima Sipy, Abbas Khan, Gurudeeban Selvaraj, Abdulrahman Alshammari, Mark E. Casida, Dong-Qing Wei:
ESOMIR: a curated database of biomarker genes and miRNAs associated with esophageal cancer. Database J. Biol. Databases Curation 2023 (2023) - [j31]Abbas Khan, Shoaib Adil, Hafiza Ayesha Qudsia, Yasir Waheed, Fahad M. Alshabrmi, Dong-Qing Wei:
Structure-based design of promising natural products to inhibit thymidylate kinase from Monkeypox virus and validation using free energy calculations. Comput. Biol. Medicine 158: 106797 (2023) - [j30]Yifan Jin, Addeela Fayyaz, Ayesha Liaqat, Abbas Khan, Abdulrahman Alshammari, Yanjing Wang, Ruo-Xu Gu, Dong-Qing Wei:
Proteomics-based vaccine targets annotation and design of subunit and mRNA-based vaccines for Monkeypox virus (MPXV) against the recent outbreak. Comput. Biol. Medicine 159: 106893 (2023) - [j29]Wenfeng Li, Farah Bano, Abbas Khan, Dong-Qing Wei, Abdulrahman Alshammari, Bin Xu, Yanjing Wang:
Inhibition of cMYC-MAX transcription factors hetero-dimerization with structurally engineered omoMYC to downregulate oncogenic pathways in renal carcinoma. Comput. Biol. Medicine 164: 107257 (2023) - [c7]Omnia Alwazzan, Abbas Khan, Ioannis Patras, Gregory G. Slabaugh:
MOAB: Multi-Modal Outer Arithmetic Block for Fusion of Histopathological Images and Genetic Data for Brain Tumor Grading. ISBI 2023: 1-5 - [c6]Abbas Khan, Mustaqeem Khan, Wail Gueaieb, Abdulmotaleb El-Saddik, Guilia De Masi, Fakhri Karray:
RECOD: Resource-Efficient Camouflaged Object Detection for UAV-Based Smart Cities Applications. ISC2 2023: 1-5 - [c5]Muhammad Saeed, Abbas Khan, Mustaqeem Khan, Muhammad Saad, Abdulmotaleb El-Saddik, Wail Gueaieb:
Gaming-Based Education System for Children on Road Safety in Metaverse Towards Smart Cities. ISC2 2023: 1-5 - [c4]Abbas Khan, Muhammad Asad, Alexander M. Zolotarev, Caroline H. Roney, Anthony Mathur, Martin Benning, Gregory G. Slabaugh:
Misclassification Loss for Segmentation of the Aortic Vessel Tree. SEG.A@MICCAI 2023: 67-79 - [i1]Amaya Gallagher-Syed, Abbas Khan, Felice Rivellese, Costantino Pitzalis, Myles J. Lewis, Gregory G. Slabaugh, Michael R. Barnes:
Automated segmentation of rheumatoid arthritis immunohistochemistry stained synovial tissue. CoRR abs/2309.07255 (2023) - 2022
- [j28]Fahad Humayun, Yutong Cai, Abbas Khan, Syed Ali Farhan, Fatima Khan, Usman Ishrat Rana, Anum binte Qamar, Nasim Fawad, Shazia Shamas, Dongqing-Wei:
Structure-guided design of multi-epitopes vaccine against variants of concern (VOCs) of SARS-CoV-2 and validation through In silico cloning and immune simulations. Comput. Biol. Medicine 140: 105122 (2022) - [j27]Fahad Humayun, Abbas Khan, Sajjad Ahmad, Yuchen Wang, Guoshen Wei, N. Nizam-Uddin, Zahid Hussain, Wajid Khan, Nasib Zaman, Muhammad Rizwan, Muhammad Waseem, Dong-Qing Wei:
Abrogation of SARS-CoV-2 interaction with host (NRP1) neuropilin-1 receptor through high-affinity marine natural compounds to curtail the infectivity: A structural-dynamics data. Comput. Biol. Medicine 141: 104714 (2022) - [j26]Abbas Khan, Sarfaraz Hussain, Sajjad Ahmad, Muhammad Suleman, Imrana Bukhari, Taimoor Khan, Farooq Rashid, Abul Kalam Azad, Muhammad Waseem, Wajid Khan, Zahid Hussain, Asghar Khan, Syed Shujait Ali, Qiyao Qin, Dong-Qing Wei:
Computational modelling of potentially emerging SARS-CoV-2 spike protein RBDs mutations with higher binding affinity towards ACE2: A structural modelling study. Comput. Biol. Medicine 141: 105163 (2022) - [j25]Abdullah Shah, Saira Rehmat, Iqra Aslam, Muhmmad Suleman, Farah Batool, Abdul Aziz, Farooq Rashid, Midrarullah, Muhmmad Asif Nawaz, Syed Shujait Ali, Muhammad Junaid, Abbas Khan, Dong-Qing Wei:
Comparative mutational analysis of SARS-CoV-2 isolates from Pakistan and structural-functional implications using computational modelling and simulation approaches. Comput. Biol. Medicine 141: 105170 (2022) - [j24]Ismail Shah, Sehrooz Jamil, Saira Rehmat, Hammad Ahmad Butt, Syed Shujait Ali, Muhammad Idrees, Yifei Zhan, Zahid Hussain, Shahid Ali, Muhammad Waseem, Arshad Iqbal, Sajjad Ahmad, Abbas Khan, Yanjing Wang, Dong-Qing Wei:
Evaluation and identification of essential therapeutic proteins and vaccinomics approach towards multi-epitopes vaccine designing against Legionella pneumophila for immune response instigation. Comput. Biol. Medicine 143: 105291 (2022) - [j23]Imtiaz Ali, Abbas Khan, Zhang Fa, Taimoor Khan, Dong-Qing Wei, Jianting Zheng:
Crystal structure of Acetyl-CoA carboxylase (AccB) from Streptomyces antibioticus and insights into the substrate-binding through in silico mutagenesis and biophysical investigations. Comput. Biol. Medicine 145: 105439 (2022) - [j22]Taimoor Khan, Muhammad Suleman, Syed Shujait Ali, Muhammad Farhan Sarwar, Imtiaz Ali, Liaqat Ali, Abbas Khan, Bakht Rokhan, Yanjing Wang, Ruili Zhao, Dong-Qing Wei:
Subtractive proteomics assisted therapeutic targets mining and designing ensemble vaccine against Candida auris for immune response induction. Comput. Biol. Medicine 145: 105462 (2022) - [j21]Abbas Khan, Wenfeng Li, Amna Ambreen, Dong-Qing Wei, Yanjing Wang, Yuanshen Mao:
A protein coupling and molecular simulation analysis of the clinical mutants of androgen receptor revealed a higher binding for Leupaxin, to increase the prostate cancer invasion and motility. Comput. Biol. Medicine 146: 105537 (2022) - [j20]Athar Shafiq, Farrukh Zubair, Amna Ambreen, Muhammad Suleman, Qudsia Yousafi, Zahid Rasul Niazi, Zeeshan Anwar, Abbas Khan, Anwar Mohammad, Dong-Qing Wei:
Investigation of the binding and dynamic features of A.30 variant revealed higher binding of RBD for hACE2 and escapes the neutralizing antibody: A molecular simulation approach. Comput. Biol. Medicine 146: 105574 (2022) - [j19]Muhammad Suleman, Uzair Asad, Shafia Arshad, Ayaz ur Rahman, Fazal Akbar, Haji Khan, Zahid Hussain, Syed Shujait Ali, Anwar Mohammad, Abbas Khan, Liaqat Ali, Dong-Qing Wei:
Screening of immune epitope in the proteome of the Dabie bandavirus, SFTS, to design a protein-specific and proteome-wide vaccine for immune response instigation using an immunoinformatics approaches. Comput. Biol. Medicine 148: 105893 (2022) - [j18]Talha Ilyas, Zubaer Ibna Mannan, Abbas Khan, Sami Azam, Hyongsuk Kim, Friso De Boer:
TSFD-Net: Tissue specific feature distillation network for nuclei segmentation and classification. Neural Networks 151: 1-15 (2022) - [j17]Abbas Khan, Wasim Jamshed, Mohamed R. Eid, Amjad Ali Pasha, El Sayed M. Tag El Din, Hamiden Abd El-Wahed Khalifa, Samaher Khalaf Alharbi:
Unsteady Electro-Hydrodynamic Stagnating Point Flow of Hybridized Nanofluid via a Convectively Heated Enlarging (Dwindling) Surface with Velocity Slippage and Heat Generation. Symmetry 14(10): 2136 (2022) - [j16]Abbas Khan, Ijaz Ul Haq, Tanveer Hussain, Khan Muhammad, Mohammad Hijji, Muhammad Sajjad, Victor Hugo C. de Albuquerque, Sung Wook Baik:
PMAL: A Proxy Model Active Learning Approach for Vision Based Industrial Applications. ACM Trans. Multim. Comput. Commun. Appl. 18(2s): 123:1-123:18 (2022) - [c3]Abbas Khan, Liliana Janik, Hatice Gunes:
Computational Recognition of Facial Expressions in Sculpture. ACIIW 2022: 1-8 - [c2]Abbas Khan, Omnia Alwazzan, Martin Benning, Greg G. Slabaugh:
Sequential Segmentation of the Left Atrium and Atrial Scars Using a Multi-scale Weight Sharing Network and Boundary-Based Processing. LAScarQS@MICCAI 2022: 69-82 - 2021
- [j15]Nagina Inayat, Mukhtaj Khan, Nadeem Iqbal, Salman Khan, Mushtaq Raza, Dost Muhammad Khan, Abbas Khan, Dong-Qing Wei:
iEnhancer-DHF: Identification of Enhancers and Their Strengths Using Optimize Deep Neural Network With Multiple Features Extraction Methods. IEEE Access 9: 40783-40796 (2021) - [j14]Abbas Khan, Hyongsuk Kim, Leon O. Chua:
PMED-Net: Pyramid Based Multi-Scale Encoder-Decoder Network for Medical Image Segmentation. IEEE Access 9: 55988-55998 (2021) - [j13]Nazia Azim, Nadeem Iqbal, Jamil Ahmad, Mukhtaj Khan, Amnah Siddiqa, Javaria Ashraf, Abbas Khan, Dong-Qing Wei:
A Static Analysis of Wnt/β-Catenin and Wnt/Ca2+ Biological Regulatory Networks for ARVC Using Automata Network Model. IEEE Access 9: 107611-107624 (2021) - [j12]Talha Ilyas, Abbas Khan, Muhammad Umraiz, Yongchae Jeong, Hyongsuk Kim:
Multi-Scale Context Aggregation for Strawberry Fruit Recognition and Disease Phenotyping. IEEE Access 9: 124491-124504 (2021) - [j11]Abbas Khan, Taimoor Khan, Syed Nouman Nasir, Syed Shujait Ali, Muhammad Suleman, Muhammad Rizwan, Muhammad Waseem, Shahid Ali, Xia Zhao, Dong-Qing Wei:
BC-TFdb: a database of transcription factor drivers in breast cancer. Database J. Biol. Databases Curation 2021 (2021) - [j10]Taimoor Khan, Abbas Khan, Dong-Qing Wei:
MMV-db: vaccinomics and RNA-based therapeutics database for infectious hemorrhagic fever-causing mammarenaviruses. Database J. Biol. Databases Curation 2021 (2021) - [j9]Muhammad Tahir Ul Qamar, Sajjad Ahmad, Israr Fatima, Faisal Ahmad, Farah Shahid, Anam Naz, Sumra Wajid Abbasi, Abbas Khan, Muhammad Usman Mirza, Usman Ali Ashfaq, Ling-Ling Chen:
Designing multi-epitope vaccine against Staphylococcus aureus by employing subtractive proteomics, reverse vaccinology and immuno-informatics approaches. Comput. Biol. Medicine 132: 104389 (2021) - [j8]Adnan Zeb, Syed Shujait Ali, Abul Kalam Azad, Muhammad Safdar, Zeeshan Anwar, Muhammad Suleman, N. Nizam-Uddin, Abbas Khan, Dong-Qing Wei:
Genome-wide screening of vaccine targets prioritization and reverse vaccinology aided design of peptides vaccine to enforce humoral immune response against Campylobacter jejuni. Comput. Biol. Medicine 133: 104412 (2021) - [j7]Abbas Khan, Shahzeb Khan, Shoaib Saleem, N. Nizam-Uddin, Anwar Mohammad, Taimoor Khan, Sajjad Ahmad, Muhammad Arshad, Syed Shujait Ali, Muhammad Suleman, Dong-Qing Wei:
Immunogenomics guided design of immunomodulatory multi-epitope subunit vaccine against the SARS-CoV-2 new variants, and its validation through in silico cloning and immune simulation. Comput. Biol. Medicine 133: 104420 (2021) - [j6]Taimoor Khan, Abbas Khan, Syed Nouman Nasir, Sajjad Ahmad, Syed Shujait Ali, Dong-Qing Wei:
CytomegaloVirusDb: Multi-omics knowledge database for cytomegaloviruses. Comput. Biol. Medicine 135: 104563 (2021) - [j5]Saba Ismail, Farah Shahid, Abbas Khan, Sadia Bhatti, Sajjad Ahmad, Anam Naz, Ahmad Almatroudi, Muhammad Tahir Ul Qamar:
Pan-vaccinomics approach towards a universal vaccine candidate against WHO priority pathogens to address growing global antibiotic resistance. Comput. Biol. Medicine 136: 104705 (2021) - [j4]Muhammad Tahir Ul Qamar, Sajjad Ahmad, Abbas Khan, Muhammad Usman Mirza, Sarfraz Ahmad, Asma Abro, Ling-Ling Chen, Ahmad Almatroudi, Dong-Qing Wei:
Structural probing of HapR to identify potent phytochemicals to control Vibrio cholera through integrated computational approaches. Comput. Biol. Medicine 138: 104929 (2021) - [j3]Muhammad Suleman, Qudsia Yousafi, Javaid Ali, Syed Shujait Ali, Zahid Hussain, Shahid Ali, Muhammad Waseem, Arshad Iqbal, Sajjad Ahmad, Abbas Khan, Yanjing Wang, Dong-Qing Wei:
Bioinformatics analysis of the differences in the binding profile of the wild-type and mutants of the SARS-CoV-2 spike protein variants with the ACE2 receptor. Comput. Biol. Medicine 138: 104936 (2021) - [c1]Abbas Khan, Muhammad Ilyas, Georgi Gaydadjiev:
Deep Multi-Patch Aggregation Network for Kinship Recognition. ICFSP 2021: 37-42
2010 – 2019
- 2018
- [j2]Abbas Khan, Arif Ali, Muhammad Junaid, Chang Liu, Aman Chandra Kaushik, William C. S. Cho, Dong-Qing Wei:
Identification of novel drug targets for diamond-blackfan anemia based on RPS19 gene mutation using protein-protein interaction network. BMC Syst. Biol. 12(4): 5-16 (2018) - [j1]Gurudeeban Selvaraj, Satyavani Kaliamurthi, Aman Chandra Kaushik, Abbas Khan, Yong-Kai Wei, William C. S. Cho, Keren Gu, Dong-Qing Wei:
Identification of target gene and prognostic evaluation for lung adenocarcinoma using gene expression meta-analysis, network analysis and neural network algorithms. J. Biomed. Informatics 86: 120-134 (2018)
Coauthor Index
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